EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015010817 (Gene tree)
Gene ID: -
Gene Symbol: snrnp70
Alias: -
Full Name: small nuclear ribonucleoprotein 70 (U1)
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 14087 bases
Position: chr8:25600879-25614965
Accession: ZDB-GENE-040825-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015009978	RRM_1	PF00076.22	2.6e-19	1	1
ENSORLP00015009968	RRM_1	PF00076.22	2.7e-18	1	1
ENSORLP00015009978	U1snRNP70_N	PF12220.8	4.6e-25	1	1
ENSORLP00015009968	U1snRNP70_N	PF12220.8	8.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015016413	-	1347	-	ENSORLP00015009968	448 (aa)	-	-
ENSORLT00015016467	-	2378	-	ENSORLP00015009978	469 (aa)	-	-

Gene Model

Click here to download ENSORLG00015010817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015010817's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015010817	snrnp70	100	82.590	ENSACIG00000017909	snrnp70	100	82.590	Amphilophus_citrinellus
ENSORLG00015010817	snrnp70	100	79.792	ENSACLG00000011144	snrnp70	100	74.739	Astatotilapia_calliptera
ENSORLG00015010817	snrnp70	54	48.263	WBGene00004390	rnp-7	57	52.105	Caenorhabditis_elegans
ENSORLG00015010817	snrnp70	55	65.759	ENSGGOG00000008245	SNRNP70	99	89.634	Gorilla_gorilla
ENSORLG00015010817	snrnp70	100	81.780	ENSHBUG00000018856	snrnp70	100	77.282	Haplochromis_burtoni
ENSORLG00015010817	snrnp70	100	80.842	ENSMAMG00000004556	snrnp70	100	80.632	Mastacembelus_armatus
ENSORLG00015010817	snrnp70	100	80.761	ENSMZEG00005022849	snrnp70	100	75.636	Maylandia_zebra
ENSORLG00015010817	snrnp70	50	71.849	ENSMICG00000038437	SNRNP70	99	89.634	Microcebus_murinus
ENSORLG00015010817	snrnp70	100	65.353	ENSMMOG00000005467	snrnp70	59	86.528	Mola_mola
ENSORLG00015010817	snrnp70	75	86.571	ENSMALG00000002275	snrnp70	89	81.739	Monopterus_albus
ENSORLG00015010817	snrnp70	54	68.313	ENSNLEG00000004899	SNRNP70	87	92.166	Nomascus_leucogenys
ENSORLG00015010817	snrnp70	100	98.721	ENSORLG00000017158	snrnp70	100	98.721	Oryzias_latipes
ENSORLG00015010817	snrnp70	100	93.817	ENSOMEG00000013002	snrnp70	100	92.537	Oryzias_melastigma
ENSORLG00015010817	snrnp70	100	76.008	ENSPFOG00000016671	snrnp70	100	77.801	Poecilia_formosa
ENSORLG00015010817	snrnp70	100	75.796	ENSPLAG00000005912	snrnp70	100	77.590	Poecilia_latipinna
ENSORLG00015010817	snrnp70	100	76.008	ENSPMEG00000008496	snrnp70	100	77.801	Poecilia_mexicana
ENSORLG00015010817	snrnp70	100	75.796	ENSPREG00000005486	snrnp70	100	77.590	Poecilia_reticulata
ENSORLG00015010817	snrnp70	100	82.030	ENSPNYG00000003258	snrnp70	100	77.542	Pundamilia_nyererei
ENSORLG00015010817	snrnp70	52	93.117	ENSSFOG00015004562	snrnp70	61	82.867	Scleropages_formosus
ENSORLG00015010817	snrnp70	78	97.409	ENSSMAG00000013978	snrnp70	100	75.610	Scophthalmus_maximus
ENSORLG00015010817	snrnp70	100	75.847	ENSTRUG00000009202	snrnp70	100	75.000	Takifugu_rubripes