EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015011091 (Gene tree)
Gene ID: -
Gene Symbol: CPSF7
Alias: -
Full Name: cleavage and polyadenylation specific factor 7
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 7468 bases
Position: chr3:18251832-18259299
Accession: 30098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015010273	RRM_1	PF00076.22	1.5e-06	1	1
ENSORLP00015010284	RRM_1	PF00076.22	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015016806	CPSF7-202	4905	-	ENSORLP00015010273	458 (aa)	-	-
ENSORLT00015016793	CPSF7-201	4126	-	ENSORLP00015010284	458 (aa)	-	-

Gene Model

Click here to download ENSORLG00015011091's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015011091's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015011091	CPSF7	57	39.130	ENSORLG00015015558	cpsf6	69	35.498

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015011091	CPSF7	63	43.939	ENSG00000111605	CPSF6	76	35.931	Homo_sapiens
ENSORLG00015011091	CPSF7	80	39.259	ENSG00000149532	CPSF7	97	39.437	Homo_sapiens
ENSORLG00015011091	CPSF7	63	43.939	ENSAMEG00000011781	CPSF6	76	33.043	Ailuropoda_melanoleuca
ENSORLG00015011091	CPSF7	60	50.000	ENSAMEG00000016595	CPSF7	60	47.857	Ailuropoda_melanoleuca
ENSORLG00015011091	CPSF7	72	40.341	ENSACIG00000018413	cpsf6	63	36.486	Amphilophus_citrinellus
ENSORLG00015011091	CPSF7	71	38.202	ENSAOCG00000017865	cpsf6	79	35.117	Amphiprion_ocellaris
ENSORLG00015011091	CPSF7	84	61.082	ENSAOCG00000012357	CPSF7	99	52.579	Amphiprion_ocellaris
ENSORLG00015011091	CPSF7	59	47.368	ENSACAG00000004381	CPSF6	75	37.143	Anolis_carolinensis
ENSORLG00015011091	CPSF7	68	39.766	ENSACLG00000026325	cpsf6	61	35.776	Astatotilapia_calliptera
ENSORLG00015011091	CPSF7	62	39.645	ENSAMXG00000016745	CPSF6	69	35.417	Astyanax_mexicanus
ENSORLG00015011091	CPSF7	63	43.939	ENSBTAG00000007323	CPSF6	76	35.931	Bos_taurus
ENSORLG00015011091	CPSF7	59	49.558	ENSCJAG00000001798	CPSF6	76	35.931	Callithrix_jacchus
ENSORLG00015011091	CPSF7	83	37.907	ENSCJAG00000019282	CPSF7	62	61.842	Callithrix_jacchus
ENSORLG00015011091	CPSF7	63	43.939	ENSCAFG00020016950	CPSF6	76	35.931	Canis_lupus_dingo
ENSORLG00015011091	CPSF7	63	43.939	ENSCHIG00000010792	CPSF6	76	35.931	Capra_hircus
ENSORLG00015011091	CPSF7	63	43.939	ENSCPOG00000015201	CPSF6	76	35.931	Cavia_porcellus
ENSORLG00015011091	CPSF7	59	49.558	ENSCCAG00000028149	CPSF6	76	35.931	Cebus_capucinus
ENSORLG00015011091	CPSF7	63	43.939	ENSCATG00000039288	CPSF6	98	32.172	Cercocebus_atys
ENSORLG00015011091	CPSF7	63	43.939	ENSCSAG00000004232	CPSF6	72	35.931	Chlorocebus_sabaeus
ENSORLG00015011091	CPSF7	63	43.939	ENSCPBG00000013322	CPSF6	76	35.931	Chrysemys_picta_bellii
ENSORLG00015011091	CPSF7	59	49.558	ENSCGRG00001018082	Cpsf6	76	35.193	Cricetulus_griseus_chok1gshd
ENSORLG00015011091	CPSF7	59	49.558	ENSCGRG00000016909	Cpsf6	75	35.193	Cricetulus_griseus_crigri
ENSORLG00015011091	CPSF7	58	44.915	ENSCSEG00000008967	cpsf6	70	34.025	Cynoglossus_semilaevis
ENSORLG00015011091	CPSF7	86	55.138	ENSCVAG00000007392	CPSF7	99	50.424	Cyprinodon_variegatus
ENSORLG00015011091	CPSF7	54	50.000	ENSCVAG00000014857	cpsf6	91	31.163	Cyprinodon_variegatus
ENSORLG00015011091	CPSF7	63	40.964	ENSDARG00000018618	cpsf6	80	34.156	Danio_rerio
ENSORLG00015011091	CPSF7	59	49.558	ENSDNOG00000015292	CPSF6	76	35.193	Dasypus_novemcinctus
ENSORLG00015011091	CPSF7	80	38.406	ENSDNOG00000018517	CPSF7	62	63.158	Dasypus_novemcinctus
ENSORLG00015011091	CPSF7	52	46.094	FBgn0035872	CG7185	58	35.772	Drosophila_melanogaster
ENSORLG00015011091	CPSF7	57	39.806	ENSETEG00000002097	CPSF6	65	32.727	Echinops_telfairi
ENSORLG00015011091	CPSF7	63	43.939	ENSEASG00005008066	CPSF6	76	35.931	Equus_asinus_asinus
ENSORLG00015011091	CPSF7	80	37.166	ENSECAG00000018521	CPSF7	64	63.158	Equus_caballus
ENSORLG00015011091	CPSF7	63	43.939	ENSECAG00000015988	CPSF6	76	35.931	Equus_caballus
ENSORLG00015011091	CPSF7	83	38.372	ENSFCAG00000013677	CPSF7	64	63.158	Felis_catus
ENSORLG00015011091	CPSF7	63	43.939	ENSFCAG00000002855	CPSF6	76	35.931	Felis_catus
ENSORLG00015011091	CPSF7	80	37.722	ENSFALG00000011927	CPSF7	68	50.000	Ficedula_albicollis
ENSORLG00015011091	CPSF7	58	44.915	ENSGACG00000019685	cpsf6	79	33.779	Gasterosteus_aculeatus
ENSORLG00015011091	CPSF7	63	43.939	ENSGAGG00000010228	CPSF6	76	35.931	Gopherus_agassizii
ENSORLG00015011091	CPSF7	59	49.558	ENSGGOG00000008211	CPSF6	98	32.172	Gorilla_gorilla
ENSORLG00015011091	CPSF7	68	39.766	ENSHBUG00000005998	cpsf6	65	35.776	Haplochromis_burtoni
ENSORLG00015011091	CPSF7	63	43.939	ENSHGLG00000000792	CPSF6	76	35.931	Heterocephalus_glaber_female
ENSORLG00015011091	CPSF7	54	50.926	ENSHCOG00000014555	cpsf6	76	34.505	Hippocampus_comes
ENSORLG00015011091	CPSF7	60	38.037	ENSKMAG00000014794	cpsf6	55	37.037	Kryptolebias_marmoratus
ENSORLG00015011091	CPSF7	80	59.409	ENSLBEG00000000947	CPSF7	97	50.800	Labrus_bergylta
ENSORLG00015011091	CPSF7	69	40.606	ENSLACG00000008625	CPSF6	56	38.411	Latimeria_chalumnae
ENSORLG00015011091	CPSF7	59	48.673	ENSLOCG00000016190	cpsf6	53	39.310	Lepisosteus_oculatus
ENSORLG00015011091	CPSF7	58	49.107	ENSLAFG00000030413	CPSF6	92	31.006	Loxodonta_africana
ENSORLG00015011091	CPSF7	59	49.558	ENSMFAG00000045318	CPSF6	98	32.172	Macaca_fascicularis
ENSORLG00015011091	CPSF7	59	49.558	ENSMMUG00000002921	CPSF6	76	35.193	Macaca_mulatta
ENSORLG00015011091	CPSF7	59	49.558	ENSMNEG00000036311	CPSF6	98	32.377	Macaca_nemestrina
ENSORLG00015011091	CPSF7	72	38.857	ENSMAMG00000010385	cpsf6	68	35.345	Mastacembelus_armatus
ENSORLG00015011091	CPSF7	68	39.766	ENSMZEG00005007975	cpsf6	65	35.776	Maylandia_zebra
ENSORLG00015011091	CPSF7	74	40.936	ENSMGAG00000004876	CPSF7	58	48.905	Meleagris_gallopavo
ENSORLG00015011091	CPSF7	63	43.939	ENSMAUG00000013240	Cpsf6	76	35.931	Mesocricetus_auratus
ENSORLG00015011091	CPSF7	59	49.558	ENSMICG00000007385	-	98	32.377	Microcebus_murinus
ENSORLG00015011091	CPSF7	59	49.558	ENSMOCG00000013982	Cpsf6	76	35.193	Microtus_ochrogaster
ENSORLG00015011091	CPSF7	63	43.939	ENSMODG00000007123	CPSF6	76	35.931	Monodelphis_domestica
ENSORLG00015011091	CPSF7	79	38.462	ENSMALG00000014908	cpsf6	74	35.526	Monopterus_albus
ENSORLG00015011091	CPSF7	59	49.558	MGP_CAROLIEiJ_G0015834	Cpsf6	76	35.931	Mus_caroli
ENSORLG00015011091	CPSF7	59	49.558	ENSMUSG00000055531	Cpsf6	76	35.931	Mus_musculus
ENSORLG00015011091	CPSF7	59	49.558	MGP_SPRETEiJ_G0016657	Cpsf6	76	35.931	Mus_spretus
ENSORLG00015011091	CPSF7	59	49.558	ENSNGAG00000015901	Cpsf6	76	35.193	Nannospalax_galili
ENSORLG00015011091	CPSF7	71	39.766	ENSNBRG00000004089	cpsf6	68	35.776	Neolamprologus_brichardi
ENSORLG00015011091	CPSF7	59	49.558	ENSNLEG00000003798	CPSF6	98	32.377	Nomascus_leucogenys
ENSORLG00015011091	CPSF7	62	43.651	ENSMEUG00000015041	CPSF6	70	36.410	Notamacropus_eugenii
ENSORLG00015011091	CPSF7	59	49.123	ENSODEG00000018399	-	62	33.939	Octodon_degus
ENSORLG00015011091	CPSF7	57	40.217	ENSONIG00000011702	cpsf6	65	35.371	Oreochromis_niloticus
ENSORLG00015011091	CPSF7	80	38.369	ENSOCUG00000024726	CPSF7	58	48.571	Oryctolagus_cuniculus
ENSORLG00015011091	CPSF7	63	43.939	ENSOCUG00000013505	CPSF6	72	35.931	Oryctolagus_cuniculus
ENSORLG00015011091	CPSF7	100	98.908	ENSORLG00000006495	CPSF7	100	98.908	Oryzias_latipes
ENSORLG00015011091	CPSF7	57	39.130	ENSORLG00000013893	cpsf6	69	35.498	Oryzias_latipes
ENSORLG00015011091	CPSF7	57	39.130	ENSORLG00020016593	cpsf6	69	35.498	Oryzias_latipes_hni
ENSORLG00015011091	CPSF7	100	98.908	ENSORLG00020012657	CPSF7	100	98.908	Oryzias_latipes_hni
ENSORLG00015011091	CPSF7	100	81.046	ENSOMEG00000000539	CPSF7	100	81.481	Oryzias_melastigma
ENSORLG00015011091	CPSF7	71	40.116	ENSOMEG00000009425	cpsf6	69	35.498	Oryzias_melastigma
ENSORLG00015011091	CPSF7	59	50.000	ENSOARG00000012937	CPSF7	59	47.482	Ovis_aries
ENSORLG00015011091	CPSF7	63	43.939	ENSPPRG00000021620	CPSF6	76	35.931	Panthera_pardus
ENSORLG00015011091	CPSF7	59	49.558	ENSPTRG00000005205	CPSF6	98	32.172	Pan_troglodytes
ENSORLG00015011091	CPSF7	63	43.939	ENSPANG00000011641	CPSF6	98	32.172	Papio_anubis
ENSORLG00015011091	CPSF7	59	48.718	ENSPKIG00000022613	CPSF6	68	36.087	Paramormyrops_kingsleyae
ENSORLG00015011091	CPSF7	63	43.939	ENSPCIG00000019063	CPSF6	76	35.931	Phascolarctos_cinereus
ENSORLG00015011091	CPSF7	63	43.939	ENSPPYG00000004756	CPSF6	76	35.931	Pongo_abelii
ENSORLG00015011091	CPSF7	63	43.939	ENSPCAG00000011574	CPSF6	72	35.931	Procavia_capensis
ENSORLG00015011091	CPSF7	59	49.558	ENSPCOG00000024384	CPSF6	76	35.193	Propithecus_coquereli
ENSORLG00015011091	CPSF7	63	43.939	ENSPVAG00000015753	CPSF6	59	37.629	Pteropus_vampyrus
ENSORLG00015011091	CPSF7	57	40.217	ENSPNYG00000020315	cpsf6	61	35.776	Pundamilia_nyererei
ENSORLG00015011091	CPSF7	65	38.462	ENSPNAG00000024098	CPSF6	70	35.950	Pygocentrus_nattereri
ENSORLG00015011091	CPSF7	63	43.939	ENSRNOG00000005927	Cpsf6	76	35.931	Rattus_norvegicus
ENSORLG00015011091	CPSF7	59	49.558	ENSRBIG00000042827	CPSF6	98	32.172	Rhinopithecus_bieti
ENSORLG00015011091	CPSF7	83	37.907	ENSRBIG00000031429	CPSF7	64	61.842	Rhinopithecus_bieti
ENSORLG00015011091	CPSF7	63	43.939	ENSRROG00000042758	CPSF6	98	32.377	Rhinopithecus_roxellana
ENSORLG00015011091	CPSF7	87	44.550	ENSSFOG00015010288	cpsf7	93	42.539	Scleropages_formosus
ENSORLG00015011091	CPSF7	60	48.696	ENSSFOG00015001688	CPSF6	62	34.711	Scleropages_formosus
ENSORLG00015011091	CPSF7	58	49.550	ENSSMAG00000000471	cpsf6	62	33.766	Scophthalmus_maximus
ENSORLG00015011091	CPSF7	71	36.723	ENSSDUG00000005024	cpsf6	68	35.345	Seriola_dumerili
ENSORLG00015011091	CPSF7	71	36.723	ENSSLDG00000009042	cpsf6	68	35.345	Seriola_lalandi_dorsalis
ENSORLG00015011091	CPSF7	63	43.939	ENSSPUG00000001238	CPSF6	73	32.727	Sphenodon_punctatus
ENSORLG00015011091	CPSF7	58	44.915	ENSSPAG00000013906	cpsf6	68	35.965	Stegastes_partitus
ENSORLG00015011091	CPSF7	63	43.939	ENSSSCG00000038031	CPSF6	76	35.931	Sus_scrofa
ENSORLG00015011091	CPSF7	80	38.647	ENSSSCG00000013083	CPSF7	62	63.158	Sus_scrofa
ENSORLG00015011091	CPSF7	69	40.678	ENSTNIG00000007576	cpsf6	56	36.747	Tetraodon_nigroviridis
ENSORLG00015011091	CPSF7	80	39.089	ENSVVUG00000004939	CPSF7	62	63.158	Vulpes_vulpes
ENSORLG00015011091	CPSF7	65	37.714	ENSXETG00000006715	cpsf7	63	41.558	Xenopus_tropicalis