EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015011624 (Gene tree)
Gene ID: -
Gene Symbol: pop4
Alias: -
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 5289 bases
Position: chr3:38511733-38517021
Accession: ZDB-GENE-050522-505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015010817	UPF0086	PF01868.16	3.6e-27	1	1
ENSORLP00015010808	UPF0086	PF01868.16	5.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015017478	-	2288	-	ENSORLP00015010817	223 (aa)	-	-
ENSORLT00015017499	-	2366	-	ENSORLP00015010808	249 (aa)	-	-

Gene Model

Click here to download ENSORLG00015011624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015011624's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015011624	pop4	91	59.804	ENSG00000105171	POP4	100	73.958	Homo_sapiens
ENSORLG00015011624	pop4	93	56.250	ENSAMEG00000018329	-	94	57.212	Ailuropoda_melanoleuca
ENSORLG00015011624	pop4	93	49.524	ENSAMEG00000003172	-	94	49.524	Ailuropoda_melanoleuca
ENSORLG00015011624	pop4	99	76.471	ENSACIG00000008358	pop4	99	76.471	Amphilophus_citrinellus
ENSORLG00015011624	pop4	91	78.218	ENSAOCG00000010116	pop4	98	78.218	Amphiprion_ocellaris
ENSORLG00015011624	pop4	99	77.376	ENSAPEG00000002829	pop4	93	77.376	Amphiprion_percula
ENSORLG00015011624	pop4	99	75.566	ENSATEG00000013028	pop4	99	75.566	Anabas_testudineus
ENSORLG00015011624	pop4	91	57.561	ENSAPLG00000014051	POP4	98	58.333	Anas_platyrhynchos
ENSORLG00015011624	pop4	91	60.294	ENSANAG00000020295	POP4	92	60.784	Aotus_nancymaae
ENSORLG00015011624	pop4	100	77.130	ENSACLG00000000526	pop4	100	77.130	Astatotilapia_calliptera
ENSORLG00015011624	pop4	100	61.883	ENSAMXG00000002899	pop4	100	61.883	Astyanax_mexicanus
ENSORLG00015011624	pop4	93	60.096	ENSBTAG00000002223	POP4	94	60.577	Bos_taurus
ENSORLG00015011624	pop4	79	30.508	WBGene00007603	C15C6.4	82	30.508	Caenorhabditis_elegans
ENSORLG00015011624	pop4	91	59.314	ENSCJAG00000046750	POP4	95	66.279	Callithrix_jacchus
ENSORLG00015011624	pop4	82	60.989	ENSCAFG00000007630	POP4	99	62.088	Canis_familiaris
ENSORLG00015011624	pop4	93	58.173	ENSCHIG00000016743	POP4	94	59.135	Capra_hircus
ENSORLG00015011624	pop4	92	57.767	ENSTSYG00000003488	POP4	93	58.252	Carlito_syrichta
ENSORLG00015011624	pop4	93	42.308	ENSCAPG00000011105	POP4	93	42.308	Cavia_aperea
ENSORLG00015011624	pop4	93	59.135	ENSCPOG00000002992	POP4	94	59.135	Cavia_porcellus
ENSORLG00015011624	pop4	91	59.314	ENSCCAG00000020285	-	92	59.314	Cebus_capucinus
ENSORLG00015011624	pop4	63	60.993	ENSCCAG00000034244	-	87	52.356	Cebus_capucinus
ENSORLG00015011624	pop4	91	60.000	ENSCATG00000036022	POP4	100	73.958	Cercocebus_atys
ENSORLG00015011624	pop4	93	59.615	ENSCLAG00000013162	POP4	94	60.096	Chinchilla_lanigera
ENSORLG00015011624	pop4	91	59.314	ENSCSAG00000004868	POP4	93	59.804	Chlorocebus_sabaeus
ENSORLG00015011624	pop4	93	41.346	ENSCHOG00000002071	POP4	95	41.827	Choloepus_hoffmanni
ENSORLG00015011624	pop4	99	54.751	ENSCPBG00000016132	POP4	99	55.204	Chrysemys_picta_bellii
ENSORLG00015011624	pop4	55	35.772	ENSCING00000023871	-	95	30.928	Ciona_intestinalis
ENSORLG00015011624	pop4	91	58.824	ENSCANG00000005924	POP4	100	59.314	Colobus_angolensis_palliatus
ENSORLG00015011624	pop4	99	54.299	ENSCGRG00001017185	Pop4	99	54.911	Cricetulus_griseus_chok1gshd
ENSORLG00015011624	pop4	99	54.299	ENSCGRG00000008155	Pop4	99	54.911	Cricetulus_griseus_crigri
ENSORLG00015011624	pop4	99	64.091	ENSCSEG00000002946	pop4	99	64.091	Cynoglossus_semilaevis
ENSORLG00015011624	pop4	99	55.656	ENSCVAG00000018602	POP4	95	55.656	Cyprinodon_variegatus
ENSORLG00015011624	pop4	99	60.633	ENSDARG00000101472	pop4	99	61.086	Danio_rerio
ENSORLG00015011624	pop4	100	56.054	ENSDNOG00000047663	POP4	83	58.654	Dasypus_novemcinctus
ENSORLG00015011624	pop4	71	55.346	ENSDORG00000008577	Pop4	92	56.250	Dipodomys_ordii
ENSORLG00015011624	pop4	73	31.765	FBgn0035831	CG8038	83	31.765	Drosophila_melanogaster
ENSORLG00015011624	pop4	98	47.945	ENSETEG00000003607	POP4	100	48.402	Echinops_telfairi
ENSORLG00015011624	pop4	98	37.826	ENSEBUG00000004305	pop4	100	39.130	Eptatretus_burgeri
ENSORLG00015011624	pop4	67	53.020	ENSEBUG00000010447	pop4	82	44.076	Eptatretus_burgeri
ENSORLG00015011624	pop4	92	40.291	ENSEBUG00000008575	pop4	92	40.291	Eptatretus_burgeri
ENSORLG00015011624	pop4	93	63.462	ENSECAG00000020206	POP4	77	63.462	Equus_caballus
ENSORLG00015011624	pop4	88	42.132	ENSEEUG00000013109	POP4	98	42.640	Erinaceus_europaeus
ENSORLG00015011624	pop4	99	61.086	ENSELUG00000019812	pop4	99	61.991	Esox_lucius
ENSORLG00015011624	pop4	93	56.731	ENSFCAG00000001619	POP4	94	57.212	Felis_catus
ENSORLG00015011624	pop4	96	58.411	ENSFALG00000000206	POP4	95	59.346	Ficedula_albicollis
ENSORLG00015011624	pop4	93	58.173	ENSFDAG00000017859	POP4	94	58.654	Fukomys_damarensis
ENSORLG00015011624	pop4	96	63.426	ENSFHEG00000012745	pop4	96	63.426	Fundulus_heteroclitus
ENSORLG00015011624	pop4	88	67.857	ENSGMOG00000000335	pop4	97	67.857	Gadus_morhua
ENSORLG00015011624	pop4	99	55.204	ENSGALG00000041972	POP4	92	56.109	Gallus_gallus
ENSORLG00015011624	pop4	80	65.922	ENSGAFG00000003571	pop4	99	65.922	Gambusia_affinis
ENSORLG00015011624	pop4	100	73.543	ENSGACG00000014510	pop4	96	79.096	Gasterosteus_aculeatus
ENSORLG00015011624	pop4	99	54.751	ENSGAGG00000024544	POP4	79	55.204	Gopherus_agassizii
ENSORLG00015011624	pop4	91	59.804	ENSGGOG00000038346	POP4	92	60.294	Gorilla_gorilla
ENSORLG00015011624	pop4	100	77.130	ENSHBUG00000021821	pop4	100	77.130	Haplochromis_burtoni
ENSORLG00015011624	pop4	93	57.692	ENSHGLG00000015798	POP4	94	58.173	Heterocephalus_glaber_female
ENSORLG00015011624	pop4	93	57.692	ENSHGLG00100009737	POP4	94	58.173	Heterocephalus_glaber_male
ENSORLG00015011624	pop4	100	68.161	ENSHCOG00000020937	pop4	100	68.161	Hippocampus_comes
ENSORLG00015011624	pop4	99	61.086	ENSIPUG00000013652	pop4	99	61.086	Ictalurus_punctatus
ENSORLG00015011624	pop4	100	56.951	ENSSTOG00000011016	POP4	100	57.399	Ictidomys_tridecemlineatus
ENSORLG00015011624	pop4	91	58.824	ENSJJAG00000013376	Pop4	92	59.804	Jaculus_jaculus
ENSORLG00015011624	pop4	100	75.336	ENSKMAG00000012250	pop4	100	75.336	Kryptolebias_marmoratus
ENSORLG00015011624	pop4	100	67.265	ENSLBEG00000014139	pop4	100	67.265	Labrus_bergylta
ENSORLG00015011624	pop4	100	67.265	ENSLBEG00000018846	-	100	67.265	Labrus_bergylta
ENSORLG00015011624	pop4	98	54.795	ENSLACG00000008581	POP4	98	55.708	Latimeria_chalumnae
ENSORLG00015011624	pop4	99	59.729	ENSLOCG00000005597	pop4	99	60.633	Lepisosteus_oculatus
ENSORLG00015011624	pop4	96	58.216	ENSLAFG00000000084	POP4	95	58.216	Loxodonta_africana
ENSORLG00015011624	pop4	91	59.314	ENSMFAG00000029606	POP4	92	59.804	Macaca_fascicularis
ENSORLG00015011624	pop4	91	58.333	ENSMMUG00000017424	POP4	92	59.804	Macaca_mulatta
ENSORLG00015011624	pop4	91	58.333	ENSMNEG00000031374	POP4	92	59.804	Macaca_nemestrina
ENSORLG00015011624	pop4	91	59.314	ENSMLEG00000043454	POP4	92	60.294	Mandrillus_leucophaeus
ENSORLG00015011624	pop4	99	78.281	ENSMAMG00000011716	pop4	99	78.281	Mastacembelus_armatus
ENSORLG00015011624	pop4	100	77.130	ENSMZEG00005002360	pop4	100	77.130	Maylandia_zebra
ENSORLG00015011624	pop4	96	57.009	ENSMGAG00000005337	POP4	95	57.944	Meleagris_gallopavo
ENSORLG00015011624	pop4	91	58.824	ENSMAUG00000020110	Pop4	92	58.824	Mesocricetus_auratus
ENSORLG00015011624	pop4	93	57.212	ENSMICG00000035730	POP4	92	58.373	Microcebus_murinus
ENSORLG00015011624	pop4	99	71.493	ENSMMOG00000015321	pop4	99	71.946	Mola_mola
ENSORLG00015011624	pop4	99	55.656	ENSMODG00000029406	POP4	91	58.491	Monodelphis_domestica
ENSORLG00015011624	pop4	100	73.543	ENSMALG00000012571	pop4	100	74.439	Monopterus_albus
ENSORLG00015011624	pop4	91	58.333	MGP_CAROLIEiJ_G0029600	Pop4	92	59.024	Mus_caroli
ENSORLG00015011624	pop4	92	59.024	ENSMUSG00000030423	Pop4	92	59.024	Mus_musculus
ENSORLG00015011624	pop4	91	58.824	MGP_SPRETEiJ_G0030699	Pop4	92	59.709	Mus_spretus
ENSORLG00015011624	pop4	93	56.731	ENSMPUG00000008041	-	94	57.692	Mustela_putorius_furo
ENSORLG00015011624	pop4	93	50.718	ENSMPUG00000008063	-	94	51.196	Mustela_putorius_furo
ENSORLG00015011624	pop4	93	45.455	ENSMLUG00000010774	POP4	94	45.933	Myotis_lucifugus
ENSORLG00015011624	pop4	56	65.600	ENSMEUG00000003636	-	100	65.600	Notamacropus_eugenii
ENSORLG00015011624	pop4	89	59.799	ENSOPRG00000004736	POP4	99	60.302	Ochotona_princeps
ENSORLG00015011624	pop4	93	58.173	ENSODEG00000013025	POP4	97	58.654	Octodon_degus
ENSORLG00015011624	pop4	99	75.113	ENSONIG00000003458	pop4	97	75.113	Oreochromis_niloticus
ENSORLG00015011624	pop4	91	59.314	ENSOCUG00000015974	POP4	90	60.804	Oryctolagus_cuniculus
ENSORLG00015011624	pop4	99	97.738	ENSORLG00000020317	pop4	99	97.738	Oryzias_latipes
ENSORLG00015011624	pop4	100	88.789	ENSOMEG00000002538	pop4	100	88.789	Oryzias_melastigma
ENSORLG00015011624	pop4	93	58.173	ENSOGAG00000011168	POP4	94	58.852	Otolemur_garnettii
ENSORLG00015011624	pop4	93	58.373	ENSOARG00000004041	POP4	94	59.330	Ovis_aries
ENSORLG00015011624	pop4	91	59.804	ENSPPAG00000040372	POP4	92	60.294	Pan_paniscus
ENSORLG00015011624	pop4	93	56.731	ENSPPRG00000010502	POP4	94	57.212	Panthera_pardus
ENSORLG00015011624	pop4	93	56.731	ENSPTIG00000016598	POP4	94	57.212	Panthera_tigris_altaica
ENSORLG00015011624	pop4	91	59.804	ENSPTRG00000010779	POP4	92	60.294	Pan_troglodytes
ENSORLG00015011624	pop4	91	59.314	ENSPANG00000008546	POP4	92	59.804	Papio_anubis
ENSORLG00015011624	pop4	90	62.189	ENSPKIG00000004468	pop4	88	62.189	Paramormyrops_kingsleyae
ENSORLG00015011624	pop4	99	55.455	ENSPSIG00000015690	POP4	100	59.314	Pelodiscus_sinensis
ENSORLG00015011624	pop4	91	65.854	ENSPMGG00000008608	pop4	98	67.805	Periophthalmus_magnuspinnatus
ENSORLG00015011624	pop4	99	56.818	ENSPEMG00000014034	-	97	56.818	Peromyscus_maniculatus_bairdii
ENSORLG00015011624	pop4	91	49.020	ENSPEMG00000019982	-	92	49.020	Peromyscus_maniculatus_bairdii
ENSORLG00015011624	pop4	65	63.448	ENSPMAG00000006265	pop4	73	63.448	Petromyzon_marinus
ENSORLG00015011624	pop4	100	56.951	ENSPCIG00000024738	POP4	95	56.951	Phascolarctos_cinereus
ENSORLG00015011624	pop4	100	69.955	ENSPFOG00000000925	pop4	100	69.955	Poecilia_formosa
ENSORLG00015011624	pop4	100	69.955	ENSPLAG00000003161	pop4	100	69.955	Poecilia_latipinna
ENSORLG00015011624	pop4	100	69.955	ENSPMEG00000002475	pop4	100	69.955	Poecilia_mexicana
ENSORLG00015011624	pop4	99	69.231	ENSPREG00000022403	pop4	93	69.231	Poecilia_reticulata
ENSORLG00015011624	pop4	91	59.804	ENSPPYG00000009805	POP4	92	60.294	Pongo_abelii
ENSORLG00015011624	pop4	99	57.727	ENSPCAG00000007737	POP4	99	58.182	Procavia_capensis
ENSORLG00015011624	pop4	93	56.731	ENSPCOG00000018055	POP4	94	57.212	Propithecus_coquereli
ENSORLG00015011624	pop4	100	56.951	ENSPVAG00000006069	POP4	100	56.951	Pteropus_vampyrus
ENSORLG00015011624	pop4	100	77.130	ENSPNYG00000020038	pop4	100	77.130	Pundamilia_nyererei
ENSORLG00015011624	pop4	99	61.538	ENSPNAG00000005591	pop4	99	61.538	Pygocentrus_nattereri
ENSORLG00015011624	pop4	92	57.561	ENSRNOG00000027646	Pop4	92	58.537	Rattus_norvegicus
ENSORLG00015011624	pop4	72	55.901	ENSRBIG00000044769	POP4	84	62.121	Rhinopithecus_bieti
ENSORLG00015011624	pop4	91	59.314	ENSRROG00000028903	POP4	92	59.804	Rhinopithecus_roxellana
ENSORLG00015011624	pop4	57	30.714	YBR257W	-	50	30.714	Saccharomyces_cerevisiae
ENSORLG00015011624	pop4	91	59.804	ENSSBOG00000032445	POP4	92	59.804	Saimiri_boliviensis_boliviensis
ENSORLG00015011624	pop4	99	56.818	ENSSHAG00000016888	POP4	99	56.818	Sarcophilus_harrisii
ENSORLG00015011624	pop4	98	61.261	ENSSFOG00015014556	pop4	97	61.261	Scleropages_formosus
ENSORLG00015011624	pop4	100	72.646	ENSSMAG00000016611	pop4	100	72.646	Scophthalmus_maximus
ENSORLG00015011624	pop4	99	79.186	ENSSDUG00000019865	pop4	89	79.186	Seriola_dumerili
ENSORLG00015011624	pop4	99	78.733	ENSSLDG00000001763	pop4	99	78.733	Seriola_lalandi_dorsalis
ENSORLG00015011624	pop4	93	57.212	ENSSARG00000004748	POP4	95	58.173	Sorex_araneus
ENSORLG00015011624	pop4	99	78.281	ENSSPAG00000014364	pop4	99	78.281	Stegastes_partitus
ENSORLG00015011624	pop4	93	58.654	ENSSSCG00000002854	POP4	94	58.654	Sus_scrofa
ENSORLG00015011624	pop4	91	58.911	ENSTGUG00000008953	POP4	100	59.901	Taeniopygia_guttata
ENSORLG00015011624	pop4	91	69.118	ENSTNIG00000006401	pop4	100	69.118	Tetraodon_nigroviridis
ENSORLG00015011624	pop4	100	57.399	ENSTBEG00000002194	POP4	100	57.399	Tupaia_belangeri
ENSORLG00015011624	pop4	93	57.692	ENSTTRG00000005882	POP4	99	55.455	Tursiops_truncatus
ENSORLG00015011624	pop4	93	56.250	ENSUAMG00000003049	-	94	56.731	Ursus_americanus
ENSORLG00015011624	pop4	93	56.250	ENSUMAG00000007522	-	94	56.731	Ursus_maritimus
ENSORLG00015011624	pop4	93	57.212	ENSVVUG00000016876	-	72	58.173	Vulpes_vulpes
ENSORLG00015011624	pop4	96	55.607	ENSXETG00000017598	pop4	96	56.075	Xenopus_tropicalis
ENSORLG00015011624	pop4	99	67.568	ENSXCOG00000017695	pop4	93	67.568	Xiphophorus_couchianus
ENSORLG00015011624	pop4	99	67.568	ENSXMAG00000013862	pop4	93	67.568	Xiphophorus_maculatus