EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015011862 (Gene tree)
Gene ID: -
Gene Symbol: arl13a
Alias: -
Full Name: ADP-ribosylation factor-like 13A
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 8518 bases
Position: chr10:12410362-12418879
Accession: ZDB-GENE-040426-1790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015011061	MMR_HSR1	PF01926.23	3.7e-06	1	1
ENSORLP00015011051	MMR_HSR1	PF01926.23	4.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015032034	-	2226	-	ENSORLP00015011051	439 (aa)	-	-
ENSORLT00015032055	-	2406	-	ENSORLP00015011061	413 (aa)	-	-

Gene Model

Click here to download ENSORLG00015011862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015011862's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015011862	arl13a	76	38.801	ENSORLG00015012586	arl13b	67	43.284

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015011862	arl13a	100	75.904	ENSACIG00000012235	arl13a	100	72.771	Amphilophus_citrinellus
ENSORLG00015011862	arl13a	100	75.598	ENSAOCG00000024309	arl13a	96	74.880	Amphiprion_ocellaris
ENSORLG00015011862	arl13a	100	79.684	ENSAPEG00000006626	arl13a	100	78.781	Amphiprion_percula
ENSORLG00015011862	arl13a	100	77.273	ENSATEG00000018113	arl13a	100	78.153	Anabas_testudineus
ENSORLG00015011862	arl13a	100	76.442	ENSACLG00000000738	arl13a	100	75.540	Astatotilapia_calliptera
ENSORLG00015011862	arl13a	99	57.971	ENSAMXG00000021495	arl13a	98	58.711	Astyanax_mexicanus
ENSORLG00015011862	arl13a	52	51.142	ENSCPBG00000014304	ARL13A	81	51.142	Chrysemys_picta_bellii
ENSORLG00015011862	arl13a	100	60.849	ENSCSEG00000002533	arl13a	100	60.142	Cynoglossus_semilaevis
ENSORLG00015011862	arl13a	99	78.781	ENSCVAG00000005783	arl13a	99	78.555	Cyprinodon_variegatus
ENSORLG00015011862	arl13a	99	66.747	ENSDARG00000052575	arl13a	99	66.140	Danio_rerio
ENSORLG00015011862	arl13a	100	77.703	ENSFHEG00000017023	arl13a	99	76.126	Fundulus_heteroclitus
ENSORLG00015011862	arl13a	100	77.477	ENSGAFG00000019994	arl13a	99	77.252	Gambusia_affinis
ENSORLG00015011862	arl13a	100	71.971	ENSGACG00000017318	arl13a	99	72.356	Gasterosteus_aculeatus
ENSORLG00015011862	arl13a	100	79.365	ENSHBUG00000016100	arl13a	100	79.233	Haplochromis_burtoni
ENSORLG00015011862	arl13a	100	69.834	ENSHCOG00000005206	arl13a	100	69.784	Hippocampus_comes
ENSORLG00015011862	arl13a	99	59.569	ENSIPUG00000017720	arl13a	99	58.894	Ictalurus_punctatus
ENSORLG00015011862	arl13a	100	74.101	ENSKMAG00000001139	arl13a	99	72.686	Kryptolebias_marmoratus
ENSORLG00015011862	arl13a	100	75.057	ENSLBEG00000028724	arl13a	99	72.870	Labrus_bergylta
ENSORLG00015011862	arl13a	100	51.537	ENSLOCG00000015307	arl13a	100	51.467	Lepisosteus_oculatus
ENSORLG00015011862	arl13a	100	73.697	ENSMAMG00000020385	arl13a	100	72.275	Mastacembelus_armatus
ENSORLG00015011862	arl13a	100	79.365	ENSMZEG00005007052	arl13a	100	79.233	Maylandia_zebra
ENSORLG00015011862	arl13a	99	70.290	ENSMMOG00000000880	arl13a	100	66.506	Mola_mola
ENSORLG00015011862	arl13a	55	86.463	ENSMALG00000009029	arl13a	100	68.810	Monopterus_albus
ENSORLG00015011862	arl13a	100	76.555	ENSNBRG00000021766	arl13a	100	74.101	Neolamprologus_brichardi
ENSORLG00015011862	arl13a	99	78.846	ENSONIG00000002645	arl13a	100	76.923	Oreochromis_niloticus
ENSORLG00015011862	arl13a	100	99.772	ENSORLG00000001425	arl13a	100	99.772	Oryzias_latipes
ENSORLG00015011862	arl13a	100	99.544	ENSORLG00020021844	arl13a	100	99.544	Oryzias_latipes_hni
ENSORLG00015011862	arl13a	100	95.672	ENSOMEG00000015603	arl13a	100	94.989	Oryzias_melastigma
ENSORLG00015011862	arl13a	99	57.176	ENSPKIG00000013558	arl13a	99	55.093	Paramormyrops_kingsleyae
ENSORLG00015011862	arl13a	54	52.444	ENSPSIG00000003515	ARL13A	100	52.444	Pelodiscus_sinensis
ENSORLG00015011862	arl13a	100	64.663	ENSPMGG00000017973	arl13a	99	63.942	Periophthalmus_magnuspinnatus
ENSORLG00015011862	arl13a	100	77.098	ENSPFOG00000016707	arl13a	99	77.027	Poecilia_formosa
ENSORLG00015011862	arl13a	100	70.120	ENSPLAG00000011307	arl13a	99	69.617	Poecilia_latipinna
ENSORLG00015011862	arl13a	100	78.231	ENSPMEG00000017855	arl13a	99	77.703	Poecilia_mexicana
ENSORLG00015011862	arl13a	100	78.458	ENSPREG00000011435	arl13a	99	77.928	Poecilia_reticulata
ENSORLG00015011862	arl13a	100	76.202	ENSPNYG00000011485	arl13a	100	75.300	Pundamilia_nyererei
ENSORLG00015011862	arl13a	99	60.096	ENSSFOG00015010065	arl13a	99	58.588	Scleropages_formosus
ENSORLG00015011862	arl13a	100	73.798	ENSSMAG00000013557	arl13a	100	74.038	Scophthalmus_maximus
ENSORLG00015011862	arl13a	100	70.843	ENSSDUG00000000933	arl13a	100	69.157	Seriola_dumerili
ENSORLG00015011862	arl13a	100	78.177	ENSSLDG00000009973	arl13a	100	76.749	Seriola_lalandi_dorsalis
ENSORLG00015011862	arl13a	78	91.892	ENSSPAG00000009109	arl13a	87	89.655	Stegastes_partitus
ENSORLG00015011862	arl13a	99	72.048	ENSXCOG00000016270	arl13a	99	72.249	Xiphophorus_couchianus
ENSORLG00015011862	arl13a	100	78.231	ENSXMAG00000013485	arl13a	99	78.829	Xiphophorus_maculatus