EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015011996 (Gene tree)
Gene ID: -
Gene Symbol: cstf2
Alias: -
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 2
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 9459 bases
Position: chr10:12380657-12390115
Accession: ZDB-GENE-031118-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015029075	RRM_1	PF00076.22	1.4e-24	1	1
ENSORLP00015011175	RRM_1	PF00076.22	1.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015032103	-	2036	-	ENSORLP00015029075	494 (aa)	-	-
ENSORLT00015017925	-	2079	-	ENSORLP00015011175	514 (aa)	-	-

Gene Model

Click here to download ENSORLG00015011996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015011996's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015011996	cstf2	97	58.120	ENSG00000101811	CSTF2	83	90.860	Homo_sapiens
ENSORLG00015011996	cstf2	96	87.631	ENSAPOG00000005630	cstf2	96	87.605	Acanthochromis_polyacanthus
ENSORLG00015011996	cstf2	97	57.119	ENSAMEG00000002082	CSTF2	83	80.498	Ailuropoda_melanoleuca
ENSORLG00015011996	cstf2	96	83.264	ENSACIG00000012852	cstf2	96	83.542	Amphilophus_citrinellus
ENSORLG00015011996	cstf2	100	86.667	ENSAOCG00000020905	cstf2	96	87.605	Amphiprion_ocellaris
ENSORLG00015011996	cstf2	100	86.667	ENSAPEG00000006526	cstf2	96	87.815	Amphiprion_percula
ENSORLG00015011996	cstf2	100	83.936	ENSATEG00000018186	cstf2	96	85.386	Anabas_testudineus
ENSORLG00015011996	cstf2	93	58.179	ENSAPLG00000007255	CSTF2	82	82.353	Anas_platyrhynchos
ENSORLG00015011996	cstf2	97	59.002	ENSANAG00000022342	CSTF2	86	80.498	Aotus_nancymaae
ENSORLG00015011996	cstf2	100	84.818	ENSACLG00000000779	cstf2	93	86.526	Astatotilapia_calliptera
ENSORLG00015011996	cstf2	89	87.013	ENSAMXG00000021477	cstf2	71	98.413	Astyanax_mexicanus
ENSORLG00015011996	cstf2	97	59.380	ENSBTAG00000003547	CSTF2	86	80.498	Bos_taurus
ENSORLG00015011996	cstf2	97	59.722	ENSCJAG00000004422	CSTF2	86	80.498	Callithrix_jacchus
ENSORLG00015011996	cstf2	97	58.291	ENSCAFG00000017551	CSTF2	86	80.000	Canis_familiaris
ENSORLG00015011996	cstf2	97	57.521	ENSCAFG00020007619	CSTF2	83	80.498	Canis_lupus_dingo
ENSORLG00015011996	cstf2	97	59.208	ENSCHIG00000016994	CSTF2	83	80.498	Capra_hircus
ENSORLG00015011996	cstf2	97	57.571	ENSTSYG00000006529	CSTF2	86	80.498	Carlito_syrichta
ENSORLG00015011996	cstf2	97	57.797	ENSCPOG00000015255	CSTF2	84	92.157	Cavia_porcellus
ENSORLG00015011996	cstf2	97	59.002	ENSCCAG00000032975	CSTF2	86	80.498	Cebus_capucinus
ENSORLG00015011996	cstf2	97	59.227	ENSCATG00000022835	CSTF2	86	80.498	Cercocebus_atys
ENSORLG00015011996	cstf2	97	58.020	ENSCLAG00000001904	CSTF2	85	90.385	Chinchilla_lanigera
ENSORLG00015011996	cstf2	97	57.190	ENSCSAG00000010360	CSTF2	83	80.498	Chlorocebus_sabaeus
ENSORLG00015011996	cstf2	97	66.284	ENSCPBG00000014293	CSTF2	93	67.447	Chrysemys_picta_bellii
ENSORLG00015011996	cstf2	97	59.051	ENSCANG00000030612	CSTF2	86	80.498	Colobus_angolensis_palliatus
ENSORLG00015011996	cstf2	96	58.219	ENSCGRG00001023023	Cstf2	86	81.590	Cricetulus_griseus_chok1gshd
ENSORLG00015011996	cstf2	96	86.316	ENSCVAG00000005731	cstf2	96	85.474	Cyprinodon_variegatus
ENSORLG00015011996	cstf2	77	98.182	ENSDARG00000090788	cstf2	94	98.305	Danio_rerio
ENSORLG00015011996	cstf2	97	59.552	ENSDORG00000007195	Cstf2	87	89.937	Dipodomys_ordii
ENSORLG00015011996	cstf2	73	85.455	ENSETEG00000004931	CSTF2	63	83.673	Echinops_telfairi
ENSORLG00015011996	cstf2	97	56.766	ENSEASG00005001216	CSTF2	83	80.000	Equus_asinus_asinus
ENSORLG00015011996	cstf2	97	57.436	ENSECAG00000009325	CSTF2	86	80.000	Equus_caballus
ENSORLG00015011996	cstf2	97	57.949	ENSFCAG00000007000	CSTF2	86	80.498	Felis_catus
ENSORLG00015011996	cstf2	88	56.294	ENSFALG00000003859	CSTF2	83	80.952	Ficedula_albicollis
ENSORLG00015011996	cstf2	97	57.483	ENSFDAG00000002416	CSTF2	86	80.498	Fukomys_damarensis
ENSORLG00015011996	cstf2	96	84.221	ENSFHEG00000017065	cstf2	93	83.366	Fundulus_heteroclitus
ENSORLG00015011996	cstf2	96	73.542	ENSGMOG00000005145	cstf2	99	72.917	Gadus_morhua
ENSORLG00015011996	cstf2	97	59.898	ENSGALG00000006760	CSTF2	99	61.257	Gallus_gallus
ENSORLG00015011996	cstf2	96	83.230	ENSGAFG00000020027	cstf2	96	82.816	Gambusia_affinis
ENSORLG00015011996	cstf2	97	77.539	ENSGACG00000017326	cstf2	98	79.175	Gasterosteus_aculeatus
ENSORLG00015011996	cstf2	97	58.564	ENSGAGG00000006037	CSTF2	87	83.534	Gopherus_agassizii
ENSORLG00015011996	cstf2	97	59.358	ENSGGOG00000022267	CSTF2	86	80.498	Gorilla_gorilla
ENSORLG00015011996	cstf2	100	84.879	ENSHBUG00000016183	cstf2	93	86.583	Haplochromis_burtoni
ENSORLG00015011996	cstf2	97	57.143	ENSHGLG00000000659	-	86	88.889	Heterocephalus_glaber_female
ENSORLG00015011996	cstf2	96	51.568	ENSHGLG00000013455	-	99	49.912	Heterocephalus_glaber_female
ENSORLG00015011996	cstf2	97	57.143	ENSHGLG00100001130	-	86	88.889	Heterocephalus_glaber_male
ENSORLG00015011996	cstf2	96	51.568	ENSHGLG00100015391	-	99	50.175	Heterocephalus_glaber_male
ENSORLG00015011996	cstf2	96	83.501	ENSHCOG00000005157	cstf2	96	83.266	Hippocampus_comes
ENSORLG00015011996	cstf2	98	66.792	ENSIPUG00000017839	cstf2	97	66.475	Ictalurus_punctatus
ENSORLG00015011996	cstf2	97	58.793	ENSSTOG00000023445	CSTF2	85	90.385	Ictidomys_tridecemlineatus
ENSORLG00015011996	cstf2	96	58.247	ENSJJAG00000020507	Cstf2	85	90.385	Jaculus_jaculus
ENSORLG00015011996	cstf2	100	83.903	ENSKMAG00000001068	cstf2	96	86.402	Kryptolebias_marmoratus
ENSORLG00015011996	cstf2	65	93.333	ENSLBEG00000028720	cstf2	89	94.915	Labrus_bergylta
ENSORLG00015011996	cstf2	97	59.699	ENSLACG00000015927	CSTF2	99	58.065	Latimeria_chalumnae
ENSORLG00015011996	cstf2	97	86.667	ENSLOCG00000015300	cstf2	79	91.837	Lepisosteus_oculatus
ENSORLG00015011996	cstf2	97	58.603	ENSLAFG00000000474	CSTF2	86	81.328	Loxodonta_africana
ENSORLG00015011996	cstf2	97	59.051	ENSMFAG00000043888	CSTF2	86	80.498	Macaca_fascicularis
ENSORLG00015011996	cstf2	97	59.051	ENSMMUG00000013008	CSTF2	86	78.879	Macaca_mulatta
ENSORLG00015011996	cstf2	97	59.051	ENSMNEG00000041824	CSTF2	86	80.498	Macaca_nemestrina
ENSORLG00015011996	cstf2	97	59.051	ENSMLEG00000036870	CSTF2	86	80.498	Mandrillus_leucophaeus
ENSORLG00015011996	cstf2	94	87.097	ENSMAMG00000020364	cstf2	96	86.882	Mastacembelus_armatus
ENSORLG00015011996	cstf2	100	84.818	ENSMZEG00005007200	cstf2	96	86.526	Maylandia_zebra
ENSORLG00015011996	cstf2	84	70.000	ENSMGAG00000004139	CSTF2	73	85.714	Meleagris_gallopavo
ENSORLG00015011996	cstf2	96	57.705	ENSMAUG00000000965	Cstf2	86	81.590	Mesocricetus_auratus
ENSORLG00015011996	cstf2	97	58.662	ENSMICG00000014121	CSTF2	86	81.743	Microcebus_murinus
ENSORLG00015011996	cstf2	96	58.048	ENSMOCG00000008081	Cstf2	85	82.128	Microtus_ochrogaster
ENSORLG00015011996	cstf2	96	73.053	ENSMMOG00000000538	cstf2	96	73.389	Mola_mola
ENSORLG00015011996	cstf2	97	60.702	ENSMODG00000011785	CSTF2	99	58.475	Monodelphis_domestica
ENSORLG00015011996	cstf2	96	74.648	MGP_CAROLIEiJ_G0033383	Cstf2	85	90.385	Mus_caroli
ENSORLG00015011996	cstf2	96	57.570	ENSMUSG00000031256	Cstf2	85	90.385	Mus_musculus
ENSORLG00015011996	cstf2	96	74.648	MGP_PahariEiJ_G0031923	Cstf2	86	81.328	Mus_pahari
ENSORLG00015011996	cstf2	96	75.000	MGP_SPRETEiJ_G0034548	Cstf2	85	90.385	Mus_spretus
ENSORLG00015011996	cstf2	97	54.859	ENSMPUG00000002339	CSTF2	80	80.498	Mustela_putorius_furo
ENSORLG00015011996	cstf2	90	81.224	ENSMLUG00000004598	CSTF2	78	80.816	Myotis_lucifugus
ENSORLG00015011996	cstf2	96	59.278	ENSNGAG00000021985	Cstf2	86	80.913	Nannospalax_galili
ENSORLG00015011996	cstf2	93	76.360	ENSNBRG00000021694	cstf2	100	78.288	Neolamprologus_brichardi
ENSORLG00015011996	cstf2	97	59.051	ENSNLEG00000007510	CSTF2	86	80.498	Nomascus_leucogenys
ENSORLG00015011996	cstf2	97	60.140	ENSMEUG00000007875	-	99	61.221	Notamacropus_eugenii
ENSORLG00015011996	cstf2	78	67.290	ENSMEUG00000011186	-	99	61.939	Notamacropus_eugenii
ENSORLG00015011996	cstf2	87	58.812	ENSMEUG00000014025	-	99	59.369	Notamacropus_eugenii
ENSORLG00015011996	cstf2	63	73.333	ENSOPRG00000003106	CSTF2	78	75.758	Ochotona_princeps
ENSORLG00015011996	cstf2	97	57.555	ENSODEG00000002059	CSTF2	86	79.918	Octodon_degus
ENSORLG00015011996	cstf2	91	89.474	ENSONIG00000002631	cstf2	60	89.069	Oreochromis_niloticus
ENSORLG00015011996	cstf2	84	85.714	ENSOANG00000004208	CSTF2	71	85.714	Ornithorhynchus_anatinus
ENSORLG00015011996	cstf2	97	57.363	ENSOCUG00000010468	CSTF2	86	81.328	Oryctolagus_cuniculus
ENSORLG00015011996	cstf2	100	99.416	ENSORLG00000001380	cstf2	100	99.416	Oryzias_latipes
ENSORLG00015011996	cstf2	100	99.611	ENSORLG00020021917	cstf2	100	99.611	Oryzias_latipes_hni
ENSORLG00015011996	cstf2	100	96.124	ENSOMEG00000015507	cstf2	100	96.124	Oryzias_melastigma
ENSORLG00015011996	cstf2	97	55.063	ENSOGAG00000011192	CSTF2	79	80.417	Otolemur_garnettii
ENSORLG00015011996	cstf2	97	59.208	ENSOARG00000001022	CSTF2	83	80.498	Ovis_aries
ENSORLG00015011996	cstf2	97	59.358	ENSPPAG00000031804	CSTF2	86	80.498	Pan_paniscus
ENSORLG00015011996	cstf2	97	57.949	ENSPPRG00000022492	CSTF2	86	80.498	Panthera_pardus
ENSORLG00015011996	cstf2	97	57.607	ENSPTIG00000009922	CSTF2	86	79.668	Panthera_tigris_altaica
ENSORLG00015011996	cstf2	97	59.358	ENSPTRG00000022090	CSTF2	86	80.498	Pan_troglodytes
ENSORLG00015011996	cstf2	97	59.051	ENSPANG00000002303	CSTF2	86	80.498	Papio_anubis
ENSORLG00015011996	cstf2	98	71.230	ENSPKIG00000005033	cstf2	92	72.358	Paramormyrops_kingsleyae
ENSORLG00015011996	cstf2	96	84.874	ENSPMGG00000006534	cstf2	96	85.924	Periophthalmus_magnuspinnatus
ENSORLG00015011996	cstf2	96	57.483	ENSPEMG00000019415	Cstf2	86	81.590	Peromyscus_maniculatus_bairdii
ENSORLG00015011996	cstf2	78	66.892	ENSPCIG00000002989	CSTF2	83	85.356	Phascolarctos_cinereus
ENSORLG00015011996	cstf2	96	83.130	ENSPLAG00000011176	cstf2	96	81.504	Poecilia_latipinna
ENSORLG00015011996	cstf2	96	82.520	ENSPMEG00000017743	cstf2	96	81.504	Poecilia_mexicana
ENSORLG00015011996	cstf2	65	86.905	ENSPREG00000011481	cstf2	97	77.306	Poecilia_reticulata
ENSORLG00015011996	cstf2	97	57.190	ENSPPYG00000020541	CSTF2	83	80.498	Pongo_abelii
ENSORLG00015011996	cstf2	97	58.627	ENSPCOG00000027744	CSTF2	86	80.498	Propithecus_coquereli
ENSORLG00015011996	cstf2	93	46.655	ENSPVAG00000008342	CSTF2	87	54.825	Pteropus_vampyrus
ENSORLG00015011996	cstf2	100	77.519	ENSPNYG00000010852	cstf2	94	91.781	Pundamilia_nyererei
ENSORLG00015011996	cstf2	96	69.844	ENSPNAG00000018887	cstf2	97	67.669	Pygocentrus_nattereri
ENSORLG00015011996	cstf2	96	58.390	ENSRNOG00000048025	Cstf2	86	81.328	Rattus_norvegicus
ENSORLG00015011996	cstf2	97	59.187	ENSRBIG00000030745	CSTF2	86	80.498	Rhinopithecus_bieti
ENSORLG00015011996	cstf2	97	59.051	ENSRROG00000045042	CSTF2	86	80.498	Rhinopithecus_roxellana
ENSORLG00015011996	cstf2	97	59.002	ENSSBOG00000021649	CSTF2	86	80.498	Saimiri_boliviensis_boliviensis
ENSORLG00015011996	cstf2	86	83.673	ENSSHAG00000003681	CSTF2	76	83.628	Sarcophilus_harrisii
ENSORLG00015011996	cstf2	96	71.540	ENSSFOG00015006348	cstf2	97	68.846	Scleropages_formosus
ENSORLG00015011996	cstf2	100	85.243	ENSSMAG00000013463	cstf2	96	86.555	Scophthalmus_maximus
ENSORLG00015011996	cstf2	97	60.461	ENSSPUG00000005288	-	98	60.039	Sphenodon_punctatus
ENSORLG00015011996	cstf2	96	60.442	ENSSSCG00000012486	CSTF2	86	80.498	Sus_scrofa
ENSORLG00015011996	cstf2	97	58.000	ENSTGUG00000002253	CSTF2	87	83.133	Taeniopygia_guttata
ENSORLG00015011996	cstf2	97	79.684	ENSTNIG00000016860	cstf2	98	80.040	Tetraodon_nigroviridis
ENSORLG00015011996	cstf2	97	58.120	ENSTTRG00000013556	CSTF2	86	80.498	Tursiops_truncatus
ENSORLG00015011996	cstf2	97	57.458	ENSUAMG00000026605	CSTF2	86	80.498	Ursus_americanus
ENSORLG00015011996	cstf2	97	61.818	ENSUMAG00000012417	CSTF2	85	79.592	Ursus_maritimus
ENSORLG00015011996	cstf2	76	69.679	ENSVPAG00000006466	CSTF2	60	67.262	Vicugna_pacos
ENSORLG00015011996	cstf2	97	58.120	ENSVVUG00000004717	CSTF2	86	80.498	Vulpes_vulpes
ENSORLG00015011996	cstf2	89	81.538	ENSXETG00000009642	cstf2	83	87.755	Xenopus_tropicalis
ENSORLG00015011996	cstf2	96	69.508	ENSXCOG00000016436	cstf2	96	68.233	Xiphophorus_couchianus
ENSORLG00015011996	cstf2	65	86.944	ENSXMAG00000013524	cstf2	97	79.291	Xiphophorus_maculatus