EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015012025 (Gene tree)
Gene ID: -
Gene Symbol: lsg1
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 4615 bases
Position: chr4:13987570-13992184
Accession: ZDB-GENE-030131-2184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015011185	MMR_HSR1	PF01926.23	9.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015032101	-	1809	-	ENSORLP00015011185	602 (aa)	-	-

Gene Model

Click here to download ENSORLG00015012025's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015012025's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015012025	lsg1	99	63.623	ENSG00000041802	LSG1	90	76.398	Homo_sapiens
ENSORLG00015012025	lsg1	100	79.206	ENSAPOG00000009694	lsg1	99	79.741	Acanthochromis_polyacanthus
ENSORLG00015012025	lsg1	100	61.898	ENSAMEG00000009343	LSG1	98	62.229	Ailuropoda_melanoleuca
ENSORLG00015012025	lsg1	98	79.479	ENSACIG00000012406	lsg1	98	79.316	Amphilophus_citrinellus
ENSORLG00015012025	lsg1	100	78.922	ENSAOCG00000016066	lsg1	99	79.288	Amphiprion_ocellaris
ENSORLG00015012025	lsg1	100	80.851	ENSAPEG00000003252	lsg1	98	81.271	Amphiprion_percula
ENSORLG00015012025	lsg1	98	79.645	ENSATEG00000011794	lsg1	98	79.483	Anabas_testudineus
ENSORLG00015012025	lsg1	95	61.218	ENSACAG00000004222	LSG1	100	60.703	Anolis_carolinensis
ENSORLG00015012025	lsg1	99	63.775	ENSANAG00000021153	LSG1	98	64.130	Aotus_nancymaae
ENSORLG00015012025	lsg1	100	77.469	ENSACLG00000000520	lsg1	98	77.008	Astatotilapia_calliptera
ENSORLG00015012025	lsg1	100	68.817	ENSAMXG00000008271	lsg1	98	70.063	Astyanax_mexicanus
ENSORLG00015012025	lsg1	99	64.055	ENSBTAG00000008461	LSG1	98	64.577	Bos_taurus
ENSORLG00015012025	lsg1	83	41.602	WBGene00016907	C53H9.2	82	44.330	Caenorhabditis_elegans
ENSORLG00015012025	lsg1	99	63.927	ENSCJAG00000013962	LSG1	98	64.130	Callithrix_jacchus
ENSORLG00015012025	lsg1	95	64.856	ENSCAFG00000013445	LSG1	100	64.856	Canis_familiaris
ENSORLG00015012025	lsg1	100	63.485	ENSCAFG00020002216	LSG1	99	63.987	Canis_lupus_dingo
ENSORLG00015012025	lsg1	100	64.241	ENSCHIG00000015769	LSG1	98	64.613	Capra_hircus
ENSORLG00015012025	lsg1	99	62.614	ENSTSYG00000001447	LSG1	98	61.883	Carlito_syrichta
ENSORLG00015012025	lsg1	94	63.062	ENSCAPG00000009856	LSG1	99	62.748	Cavia_aperea
ENSORLG00015012025	lsg1	99	64.363	ENSCCAG00000035744	LSG1	98	64.734	Cebus_capucinus
ENSORLG00015012025	lsg1	99	63.927	ENSCATG00000042060	LSG1	98	63.199	Cercocebus_atys
ENSORLG00015012025	lsg1	99	63.623	ENSCSAG00000008796	LSG1	90	63.975	Chlorocebus_sabaeus
ENSORLG00015012025	lsg1	100	65.008	ENSCPBG00000015941	LSG1	82	64.462	Chrysemys_picta_bellii
ENSORLG00015012025	lsg1	83	50.295	ENSCING00000007079	-	97	50.202	Ciona_intestinalis
ENSORLG00015012025	lsg1	93	47.513	ENSCSAVG00000002514	-	98	50.507	Ciona_savignyi
ENSORLG00015012025	lsg1	99	62.861	ENSCANG00000030709	LSG1	98	62.888	Colobus_angolensis_palliatus
ENSORLG00015012025	lsg1	99	64.613	ENSCGRG00001019846	Lsg1	98	65.372	Cricetulus_griseus_chok1gshd
ENSORLG00015012025	lsg1	99	63.287	ENSCGRG00000014617	Lsg1	98	64.038	Cricetulus_griseus_crigri
ENSORLG00015012025	lsg1	98	75.962	ENSCSEG00000008522	lsg1	98	75.962	Cynoglossus_semilaevis
ENSORLG00015012025	lsg1	97	79.248	ENSCVAG00000002484	lsg1	98	80.163	Cyprinodon_variegatus
ENSORLG00015012025	lsg1	100	71.094	ENSDARG00000015352	lsg1	98	71.246	Danio_rerio
ENSORLG00015012025	lsg1	99	62.918	ENSDNOG00000006224	LSG1	98	62.791	Dasypus_novemcinctus
ENSORLG00015012025	lsg1	99	51.456	FBgn0266284	Ns3	98	50.909	Drosophila_melanogaster
ENSORLG00015012025	lsg1	87	76.000	ENSETEG00000003888	LSG1	87	80.645	Echinops_telfairi
ENSORLG00015012025	lsg1	87	57.417	ENSEBUG00000003119	lsg1	85	57.417	Eptatretus_burgeri
ENSORLG00015012025	lsg1	99	63.830	ENSEASG00005000678	LSG1	98	64.186	Equus_asinus_asinus
ENSORLG00015012025	lsg1	99	63.982	ENSECAG00000017659	LSG1	98	64.031	Equus_caballus
ENSORLG00015012025	lsg1	87	54.701	ENSEEUG00000015217	LSG1	85	54.701	Erinaceus_europaeus
ENSORLG00015012025	lsg1	100	73.194	ENSELUG00000023973	lsg1	98	73.443	Esox_lucius
ENSORLG00015012025	lsg1	100	62.367	ENSFCAG00000024957	LSG1	98	62.848	Felis_catus
ENSORLG00015012025	lsg1	92	61.228	ENSFALG00000007210	LSG1	94	61.551	Ficedula_albicollis
ENSORLG00015012025	lsg1	99	62.559	ENSFDAG00000017373	LSG1	98	62.898	Fukomys_damarensis
ENSORLG00015012025	lsg1	97	80.195	ENSFHEG00000003680	lsg1	98	79.968	Fundulus_heteroclitus
ENSORLG00015012025	lsg1	98	67.353	ENSGMOG00000015834	lsg1	88	80.408	Gadus_morhua
ENSORLG00015012025	lsg1	99	59.304	ENSGALG00000007058	LSG1	86	59.783	Gallus_gallus
ENSORLG00015012025	lsg1	97	82.119	ENSGAFG00000015831	lsg1	98	82.372	Gambusia_affinis
ENSORLG00015012025	lsg1	98	76.603	ENSGACG00000009323	lsg1	98	76.282	Gasterosteus_aculeatus
ENSORLG00015012025	lsg1	99	63.623	ENSGGOG00000000520	LSG1	98	63.975	Gorilla_gorilla
ENSORLG00015012025	lsg1	100	78.627	ENSHBUG00000005659	lsg1	98	77.990	Haplochromis_burtoni
ENSORLG00015012025	lsg1	99	63.233	ENSHGLG00000017390	LSG1	98	63.916	Heterocephalus_glaber_female
ENSORLG00015012025	lsg1	99	63.233	ENSHGLG00100018587	LSG1	98	63.916	Heterocephalus_glaber_male
ENSORLG00015012025	lsg1	97	77.419	ENSHCOG00000016848	lsg1	98	77.170	Hippocampus_comes
ENSORLG00015012025	lsg1	100	71.315	ENSIPUG00000008631	lsg1	98	71.475	Ictalurus_punctatus
ENSORLG00015012025	lsg1	71	60.042	ENSSTOG00000010234	LSG1	90	61.088	Ictidomys_tridecemlineatus
ENSORLG00015012025	lsg1	99	63.453	ENSJJAG00000015513	Lsg1	98	63.782	Jaculus_jaculus
ENSORLG00015012025	lsg1	98	77.886	ENSKMAG00000009681	lsg1	98	78.713	Kryptolebias_marmoratus
ENSORLG00015012025	lsg1	98	79.062	ENSLBEG00000024261	lsg1	98	79.899	Labrus_bergylta
ENSORLG00015012025	lsg1	100	63.705	ENSLACG00000013399	LSG1	98	64.363	Latimeria_chalumnae
ENSORLG00015012025	lsg1	98	70.330	ENSLOCG00000004918	lsg1	98	70.016	Lepisosteus_oculatus
ENSORLG00015012025	lsg1	99	64.341	ENSLAFG00000012919	-	98	64.557	Loxodonta_africana
ENSORLG00015012025	lsg1	99	63.623	ENSMFAG00000039903	LSG1	98	62.888	Macaca_fascicularis
ENSORLG00015012025	lsg1	99	63.623	ENSMMUG00000010708	LSG1	98	63.975	Macaca_mulatta
ENSORLG00015012025	lsg1	99	63.623	ENSMNEG00000031538	LSG1	98	63.043	Macaca_nemestrina
ENSORLG00015012025	lsg1	99	63.623	ENSMLEG00000041184	LSG1	98	63.975	Mandrillus_leucophaeus
ENSORLG00015012025	lsg1	100	79.454	ENSMAMG00000000470	lsg1	98	79.344	Mastacembelus_armatus
ENSORLG00015012025	lsg1	100	78.783	ENSMZEG00005017865	lsg1	98	78.150	Maylandia_zebra
ENSORLG00015012025	lsg1	88	60.647	ENSMGAG00000007050	LSG1	99	61.054	Meleagris_gallopavo
ENSORLG00015012025	lsg1	90	65.157	ENSMAUG00000016976	Lsg1	90	65.832	Mesocricetus_auratus
ENSORLG00015012025	lsg1	99	62.748	ENSMICG00000049087	LSG1	98	63.396	Microcebus_murinus
ENSORLG00015012025	lsg1	99	63.509	ENSMOCG00000022136	Lsg1	98	65.024	Microtus_ochrogaster
ENSORLG00015012025	lsg1	98	77.517	ENSMMOG00000008884	lsg1	98	77.517	Mola_mola
ENSORLG00015012025	lsg1	99	54.669	ENSMODG00000019828	LSG1	98	54.839	Monodelphis_domestica
ENSORLG00015012025	lsg1	100	64.286	MGP_CAROLIEiJ_G0020648	Lsg1	98	64.659	Mus_caroli
ENSORLG00015012025	lsg1	100	63.975	ENSMUSG00000022538	Lsg1	98	64.976	Mus_musculus
ENSORLG00015012025	lsg1	98	64.207	MGP_PahariEiJ_G0016352	Lsg1	98	64.409	Mus_pahari
ENSORLG00015012025	lsg1	100	64.130	MGP_SPRETEiJ_G0021544	Lsg1	98	64.976	Mus_spretus
ENSORLG00015012025	lsg1	100	62.974	ENSMPUG00000003734	LSG1	98	62.848	Mustela_putorius_furo
ENSORLG00015012025	lsg1	100	64.373	ENSMLUG00000012548	LSG1	98	64.219	Myotis_lucifugus
ENSORLG00015012025	lsg1	99	65.039	ENSNGAG00000021872	Lsg1	98	65.756	Nannospalax_galili
ENSORLG00015012025	lsg1	99	64.231	ENSNLEG00000008293	LSG1	98	64.596	Nomascus_leucogenys
ENSORLG00015012025	lsg1	71	69.072	ENSMEUG00000009041	-	84	69.072	Notamacropus_eugenii
ENSORLG00015012025	lsg1	100	77.245	ENSONIG00000002635	lsg1	98	77.093	Oreochromis_niloticus
ENSORLG00015012025	lsg1	95	65.210	ENSOANG00000012742	LSG1	99	65.147	Ornithorhynchus_anatinus
ENSORLG00015012025	lsg1	99	63.030	ENSOCUG00000004817	LSG1	98	62.906	Oryctolagus_cuniculus
ENSORLG00015012025	lsg1	100	97.368	ENSORLG00000007695	lsg1	100	97.368	Oryzias_latipes
ENSORLG00015012025	lsg1	100	95.779	ENSORLG00020016286	lsg1	100	95.779	Oryzias_latipes_hni
ENSORLG00015012025	lsg1	98	90.216	ENSOMEG00000022379	lsg1	98	90.682	Oryzias_melastigma
ENSORLG00015012025	lsg1	99	62.179	ENSOGAG00000003475	LSG1	98	62.500	Otolemur_garnettii
ENSORLG00015012025	lsg1	100	63.400	ENSOARG00000020403	LSG1	98	63.750	Ovis_aries
ENSORLG00015012025	lsg1	99	63.623	ENSPPAG00000029271	LSG1	98	63.975	Pan_paniscus
ENSORLG00015012025	lsg1	100	61.712	ENSPPRG00000010281	LSG1	98	62.175	Panthera_pardus
ENSORLG00015012025	lsg1	100	62.519	ENSPTIG00000010789	LSG1	98	63.003	Panthera_tigris_altaica
ENSORLG00015012025	lsg1	99	63.470	ENSPTRG00000015760	LSG1	98	63.820	Pan_troglodytes
ENSORLG00015012025	lsg1	99	63.470	ENSPANG00000018249	LSG1	98	62.733	Papio_anubis
ENSORLG00015012025	lsg1	99	71.677	ENSPKIG00000002895	lsg1	98	72.258	Paramormyrops_kingsleyae
ENSORLG00015012025	lsg1	96	61.006	ENSPSIG00000009821	LSG1	99	60.883	Pelodiscus_sinensis
ENSORLG00015012025	lsg1	95	77.685	ENSPMGG00000000931	lsg1	100	77.685	Periophthalmus_magnuspinnatus
ENSORLG00015012025	lsg1	99	63.482	ENSPEMG00000012082	-	98	64.151	Peromyscus_maniculatus_bairdii
ENSORLG00015012025	lsg1	99	60.090	ENSPMAG00000007451	lsg1	98	60.061	Petromyzon_marinus
ENSORLG00015012025	lsg1	98	65.405	ENSPCIG00000013890	LSG1	78	65.405	Phascolarctos_cinereus
ENSORLG00015012025	lsg1	97	78.686	ENSPFOG00000021882	lsg1	98	79.133	Poecilia_formosa
ENSORLG00015012025	lsg1	97	80.000	ENSPLAG00000019536	lsg1	98	79.903	Poecilia_latipinna
ENSORLG00015012025	lsg1	97	78.435	ENSPMEG00000017281	lsg1	98	78.400	Poecilia_mexicana
ENSORLG00015012025	lsg1	97	69.280	ENSPREG00000006048	lsg1	98	69.586	Poecilia_reticulata
ENSORLG00015012025	lsg1	92	62.975	ENSPPYG00000014425	LSG1	98	63.682	Pongo_abelii
ENSORLG00015012025	lsg1	89	73.333	ENSPCAG00000005511	LSG1	88	79.032	Procavia_capensis
ENSORLG00015012025	lsg1	99	63.190	ENSPCOG00000012360	LSG1	98	63.224	Propithecus_coquereli
ENSORLG00015012025	lsg1	100	77.469	ENSPNYG00000021994	lsg1	98	77.008	Pundamilia_nyererei
ENSORLG00015012025	lsg1	100	71.607	ENSPNAG00000015533	lsg1	98	70.794	Pygocentrus_nattereri
ENSORLG00015012025	lsg1	100	63.053	ENSRNOG00000001727	Lsg1	98	63.707	Rattus_norvegicus
ENSORLG00015012025	lsg1	99	63.262	ENSRBIG00000029053	LSG1	98	63.608	Rhinopithecus_bieti
ENSORLG00015012025	lsg1	99	63.262	ENSRROG00000037702	LSG1	98	63.608	Rhinopithecus_roxellana
ENSORLG00015012025	lsg1	82	40.962	YGL099W	LSG1	71	42.653	Saccharomyces_cerevisiae
ENSORLG00015012025	lsg1	99	63.775	ENSSBOG00000034938	LSG1	98	64.286	Saimiri_boliviensis_boliviensis
ENSORLG00015012025	lsg1	76	59.542	ENSSHAG00000003487	LSG1	100	60.115	Sarcophilus_harrisii
ENSORLG00015012025	lsg1	98	71.497	ENSSFOG00015008955	lsg1	98	70.860	Scleropages_formosus
ENSORLG00015012025	lsg1	98	79.206	ENSSDUG00000004622	lsg1	98	78.889	Seriola_dumerili
ENSORLG00015012025	lsg1	98	80.456	ENSSLDG00000010869	lsg1	98	80.456	Seriola_lalandi_dorsalis
ENSORLG00015012025	lsg1	86	66.066	ENSSARG00000012981	LSG1	78	66.066	Sorex_araneus
ENSORLG00015012025	lsg1	100	64.590	ENSSPUG00000016347	LSG1	98	63.975	Sphenodon_punctatus
ENSORLG00015012025	lsg1	100	79.805	ENSSPAG00000005508	lsg1	99	80.402	Stegastes_partitus
ENSORLG00015012025	lsg1	100	63.256	ENSSSCG00000011827	LSG1	98	63.449	Sus_scrofa
ENSORLG00015012025	lsg1	88	59.564	ENSTGUG00000009068	LSG1	100	59.732	Taeniopygia_guttata
ENSORLG00015012025	lsg1	97	75.246	ENSTRUG00000017380	lsg1	98	75.163	Takifugu_rubripes
ENSORLG00015012025	lsg1	97	76.214	ENSTNIG00000015570	lsg1	98	76.688	Tetraodon_nigroviridis
ENSORLG00015012025	lsg1	100	60.337	ENSTTRG00000000559	LSG1	98	60.312	Tursiops_truncatus
ENSORLG00015012025	lsg1	100	61.912	ENSUAMG00000012454	LSG1	98	62.539	Ursus_americanus
ENSORLG00015012025	lsg1	100	61.912	ENSUMAG00000000855	LSG1	98	62.539	Ursus_maritimus
ENSORLG00015012025	lsg1	95	60.640	ENSVPAG00000012400	LSG1	100	60.320	Vicugna_pacos
ENSORLG00015012025	lsg1	95	64.887	ENSVVUG00000008956	LSG1	97	64.887	Vulpes_vulpes
ENSORLG00015012025	lsg1	100	66.461	ENSXETG00000003451	lsg1	98	67.419	Xenopus_tropicalis
ENSORLG00015012025	lsg1	97	80.750	ENSXCOG00000003239	lsg1	98	80.357	Xiphophorus_couchianus
ENSORLG00015012025	lsg1	97	80.960	ENSXMAG00000005536	lsg1	98	80.725	Xiphophorus_maculatus