EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015012100 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: FA complementation group M
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 33364 bases
Position: chr22:9597757-9631120
Accession: 101171121
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015029144	ResIII	PF04851.15	3.3e-18	1	1
ENSORLP00015029144	DEAD	PF00270.29	6.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015018105	-	5973	XM_011490289	ENSORLP00015029144	1990 (aa)	XP_011488591	-

Gene Model

Click here to download ENSORLG00015012100's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015012100's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015012100	-	73	54.630	ENSG00000187790	FANCM	97	58.815	Homo_sapiens
ENSORLG00015012100	-	99	62.309	ENSATEG00000012412	-	99	62.200	Anabas_testudineus
ENSORLG00015012100	-	100	62.322	ENSACLG00000016008	-	100	62.988	Astatotilapia_calliptera
ENSORLG00015012100	-	86	45.725	ENSAMXG00000020275	-	92	46.230	Astyanax_mexicanus
ENSORLG00015012100	-	73	55.324	ENSBTAG00000002612	FANCM	95	56.650	Bos_taurus
ENSORLG00015012100	-	73	55.336	ENSCJAG00000015945	FANCM	50	54.988	Callithrix_jacchus
ENSORLG00015012100	-	80	53.802	ENSCAFG00000014062	FANCM	50	54.060	Canis_familiaris
ENSORLG00015012100	-	73	54.503	ENSCHIG00000015176	FANCM	62	54.872	Capra_hircus
ENSORLG00015012100	-	79	54.918	ENSCPOG00000001446	FANCM	50	54.801	Cavia_porcellus
ENSORLG00015012100	-	69	55.140	ENSCCAG00000026593	FANCM	50	54.790	Cebus_capucinus
ENSORLG00015012100	-	65	54.032	ENSCPBG00000015089	FANCM	67	53.486	Chrysemys_picta_bellii
ENSORLG00015012100	-	73	54.630	ENSCANG00000029498	FANCM	50	54.282	Colobus_angolensis_palliatus
ENSORLG00015012100	-	79	54.936	ENSCGRG00001023573	Fancm	51	54.472	Cricetulus_griseus_chok1gshd
ENSORLG00015012100	-	99	57.055	ENSCSEG00000002313	-	100	57.367	Cynoglossus_semilaevis
ENSORLG00015012100	-	94	59.674	ENSCVAG00000015579	-	99	59.538	Cyprinodon_variegatus
ENSORLG00015012100	-	72	54.426	ENSDNOG00000007697	FANCM	50	54.312	Dasypus_novemcinctus
ENSORLG00015012100	-	92	54.812	ENSDORG00000010095	Fancm	50	54.577	Dipodomys_ordii
ENSORLG00015012100	-	56	55.793	ENSETEG00000003360	FANCM	51	55.793	Echinops_telfairi
ENSORLG00015012100	-	63	54.861	ENSEASG00005007781	FANCM	96	59.375	Equus_asinus_asinus
ENSORLG00015012100	-	68	55.093	ENSECAG00000018694	FANCM	53	55.671	Equus_caballus
ENSORLG00015012100	-	51	52.727	ENSEEUG00000005607	-	51	52.143	Erinaceus_europaeus
ENSORLG00015012100	-	88	50.036	ENSELUG00000015761	-	96	49.571	Esox_lucius
ENSORLG00015012100	-	72	54.545	ENSFALG00000001703	FANCM	77	54.545	Ficedula_albicollis
ENSORLG00015012100	-	73	55.322	ENSFDAG00000009043	FANCM	63	55.088	Fukomys_damarensis
ENSORLG00015012100	-	94	67.173	ENSGMOG00000002019	-	100	50.814	Gadus_morhua
ENSORLG00015012100	-	66	57.464	ENSGALG00000031182	FANCM	65	55.652	Gallus_gallus
ENSORLG00015012100	-	99	54.981	ENSGACG00000009448	-	99	54.558	Gasterosteus_aculeatus
ENSORLG00015012100	-	100	61.244	ENSHBUG00000007085	-	100	61.241	Haplochromis_burtoni
ENSORLG00015012100	-	73	53.600	ENSHGLG00000013787	FANCM	68	54.220	Heterocephalus_glaber_female
ENSORLG00015012100	-	73	53.600	ENSHGLG00100006377	FANCM	68	54.220	Heterocephalus_glaber_male
ENSORLG00015012100	-	99	47.538	ENSIPUG00000014629	fancm	89	65.405	Ictalurus_punctatus
ENSORLG00015012100	-	89	62.733	ENSLBEG00000004982	-	95	63.169	Labrus_bergylta
ENSORLG00015012100	-	73	56.315	ENSLACG00000007739	FANCM	62	55.787	Latimeria_chalumnae
ENSORLG00015012100	-	99	51.566	ENSLOCG00000011318	FANCM	95	51.418	Lepisosteus_oculatus
ENSORLG00015012100	-	78	54.459	ENSLAFG00000001136	FANCM	51	54.345	Loxodonta_africana
ENSORLG00015012100	-	100	60.817	ENSMAMG00000007087	-	99	60.770	Mastacembelus_armatus
ENSORLG00015012100	-	100	62.322	ENSMZEG00005004644	-	100	62.988	Maylandia_zebra
ENSORLG00015012100	-	79	52.149	ENSMAUG00000015450	Fancm	50	51.860	Mesocricetus_auratus
ENSORLG00015012100	-	73	55.324	ENSMICG00000005811	FANCM	50	54.977	Microcebus_murinus
ENSORLG00015012100	-	79	54.872	ENSMOCG00000008775	Fancm	50	54.809	Microtus_ochrogaster
ENSORLG00015012100	-	94	59.742	ENSMMOG00000010215	-	99	56.768	Mola_mola
ENSORLG00015012100	-	72	52.907	ENSMODG00000007334	FANCM	51	52.907	Monodelphis_domestica
ENSORLG00015012100	-	79	53.963	MGP_CAROLIEiJ_G0017791	Fancm	58	52.868	Mus_caroli
ENSORLG00015012100	-	73	53.900	ENSMUSG00000055884	Fancm	95	57.790	Mus_musculus
ENSORLG00015012100	-	79	53.846	MGP_SPRETEiJ_G0018636	Fancm	56	53.667	Mus_spretus
ENSORLG00015012100	-	79	52.955	ENSMLUG00000006671	FANCM	71	52.607	Myotis_lucifugus
ENSORLG00015012100	-	73	53.310	ENSNGAG00000017199	Fancm	63	53.194	Nannospalax_galili
ENSORLG00015012100	-	73	54.809	ENSNLEG00000004432	FANCM	69	54.461	Nomascus_leucogenys
ENSORLG00015012100	-	91	77.224	ENSONIG00000003531	-	90	77.224	Oreochromis_niloticus
ENSORLG00015012100	-	81	54.646	ENSOCUG00000007539	FANCM	52	53.982	Oryctolagus_cuniculus
ENSORLG00015012100	-	100	96.845	ENSORLG00000014503	-	100	96.845	Oryzias_latipes
ENSORLG00015012100	-	100	97.288	ENSORLG00020013516	-	100	97.288	Oryzias_latipes_hni
ENSORLG00015012100	-	100	80.729	ENSOMEG00000010717	-	99	80.579	Oryzias_melastigma
ENSORLG00015012100	-	73	56.112	ENSOGAG00000003015	FANCM	50	55.620	Otolemur_garnettii
ENSORLG00015012100	-	73	54.734	ENSOARG00000009429	FANCM	69	55.104	Ovis_aries
ENSORLG00015012100	-	73	54.977	ENSPPAG00000028944	FANCM	50	54.630	Pan_paniscus
ENSORLG00015012100	-	73	54.630	ENSPTRG00000006307	FANCM	50	54.282	Pan_troglodytes
ENSORLG00015012100	-	78	54.861	ENSPANG00000023200	FANCM	50	54.514	Papio_anubis
ENSORLG00015012100	-	79	53.118	ENSPEMG00000005619	Fancm	57	53.002	Peromyscus_maniculatus_bairdii
ENSORLG00015012100	-	85	80.556	ENSPFOG00000002008	-	85	80.556	Poecilia_formosa
ENSORLG00015012100	-	99	60.983	ENSPLAG00000014164	-	99	61.032	Poecilia_latipinna
ENSORLG00015012100	-	99	60.790	ENSPMEG00000010746	-	99	60.938	Poecilia_mexicana
ENSORLG00015012100	-	99	61.333	ENSPREG00000019849	-	99	61.037	Poecilia_reticulata
ENSORLG00015012100	-	79	54.977	ENSPPYG00000005781	FANCM	52	54.630	Pongo_abelii
ENSORLG00015012100	-	99	43.962	ENSPNAG00000013558	-	66	54.244	Pygocentrus_nattereri
ENSORLG00015012100	-	81	50.763	ENSRNOG00000056721	Fancm	82	50.436	Rattus_norvegicus
ENSORLG00015012100	-	73	54.273	ENSRBIG00000011451	FANCM	50	54.273	Rhinopithecus_bieti
ENSORLG00015012100	-	73	55.104	ENSSBOG00000030882	FANCM	51	54.408	Saimiri_boliviensis_boliviensis
ENSORLG00015012100	-	66	57.931	ENSSHAG00000000507	FANCM	69	52.768	Sarcophilus_harrisii
ENSORLG00015012100	-	99	59.394	ENSSMAG00000019903	-	100	73.861	Scophthalmus_maximus
ENSORLG00015012100	-	70	59.910	ENSSDUG00000016682	-	91	90.051	Seriola_dumerili
ENSORLG00015012100	-	99	62.160	ENSSLDG00000003408	-	99	62.298	Seriola_lalandi_dorsalis
ENSORLG00015012100	-	60	58.321	ENSSARG00000002618	FANCM	51	58.321	Sorex_araneus
ENSORLG00015012100	-	79	54.693	ENSSSCG00000005000	FANCM	51	54.577	Sus_scrofa
ENSORLG00015012100	-	99	56.568	ENSTNIG00000017277	-	100	56.208	Tetraodon_nigroviridis
ENSORLG00015012100	-	73	53.318	ENSTTRG00000006669	FANCM	50	52.852	Tursiops_truncatus
ENSORLG00015012100	-	80	53.687	ENSVVUG00000000357	FANCM	50	53.944	Vulpes_vulpes
ENSORLG00015012100	-	99	61.024	ENSXMAG00000007702	-	99	62.033	Xiphophorus_maculatus