EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015012206 (Gene tree)
Gene ID: -
Gene Symbol: ppargc1a
Alias: -
Full Name: peroxisome proliferator-activated receptor gamma%2C coactivator 1 alpha
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 45903 bases
Position: chr18:10392759-10438661
Accession: ZDB-GENE-080505-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015011325	RRM_1	PF00076.22	2.2e-07	1	1
ENSORLP00015011357	RRM_1	PF00076.22	2.5e-07	1	1
ENSORLP00015011385	RRM_1	PF00076.22	3.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015018187	-	2993	-	ENSORLP00015011357	875 (aa)	-	-
ENSORLT00015018156	-	2367	-	ENSORLP00015011325	788 (aa)	-	-
ENSORLT00015018198	-	4169	-	ENSORLP00015011385	1267 (aa)	-	-

Gene Model

Click here to download ENSORLG00015012206's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015012206's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015012206	ppargc1a	90	82.051	ENSG00000109819	PPARGC1A	91	78.421	Homo_sapiens
ENSORLG00015012206	ppargc1a	98	96.735	ENSAPOG00000018632	ppargc1a	99	96.735	Acanthochromis_polyacanthus
ENSORLG00015012206	ppargc1a	91	80.488	ENSAMEG00000010421	PPARGC1A	91	77.895	Ailuropoda_melanoleuca
ENSORLG00015012206	ppargc1a	91	96.053	ENSACIG00000009732	ppargc1a	100	94.737	Amphilophus_citrinellus
ENSORLG00015012206	ppargc1a	98	96.735	ENSAOCG00000006754	ppargc1a	100	96.735	Amphiprion_ocellaris
ENSORLG00015012206	ppargc1a	100	82.475	ENSAPEG00000022574	ppargc1a	100	96.735	Amphiprion_percula
ENSORLG00015012206	ppargc1a	99	97.368	ENSATEG00000016702	ppargc1a	99	90.850	Anabas_testudineus
ENSORLG00015012206	ppargc1a	91	81.212	ENSAPLG00000005303	PPARGC1A	89	80.899	Anas_platyrhynchos
ENSORLG00015012206	ppargc1a	100	54.675	ENSACAG00000000741	PPARGC1A	72	79.213	Anolis_carolinensis
ENSORLG00015012206	ppargc1a	98	85.484	ENSANAG00000035930	PPARGC1A	91	77.895	Aotus_nancymaae
ENSORLG00015012206	ppargc1a	95	95.082	ENSACLG00000001002	ppargc1a	98	95.142	Astatotilapia_calliptera
ENSORLG00015012206	ppargc1a	99	93.421	ENSAMXG00000002461	ppargc1a	99	64.743	Astyanax_mexicanus
ENSORLG00015012206	ppargc1a	100	54.653	ENSBTAG00000017024	PPARGC1A	91	77.249	Bos_taurus
ENSORLG00015012206	ppargc1a	98	85.484	ENSCJAG00000013024	PPARGC1A	91	77.895	Callithrix_jacchus
ENSORLG00015012206	ppargc1a	91	80.488	ENSCAFG00000016519	PPARGC1A	91	77.895	Canis_familiaris
ENSORLG00015012206	ppargc1a	88	80.488	ENSCAFG00020027242	PPARGC1A	90	77.895	Canis_lupus_dingo
ENSORLG00015012206	ppargc1a	100	54.653	ENSCHIG00000015991	PPARGC1A	91	77.368	Capra_hircus
ENSORLG00015012206	ppargc1a	90	82.051	ENSTSYG00000010439	PPARGC1A	91	78.421	Carlito_syrichta
ENSORLG00015012206	ppargc1a	85	83.673	ENSCAPG00000005150	PPARGC1A	83	77.368	Cavia_aperea
ENSORLG00015012206	ppargc1a	88	82.895	ENSCPOG00000001518	PPARGC1A	91	77.368	Cavia_porcellus
ENSORLG00015012206	ppargc1a	99	82.051	ENSCCAG00000024681	PPARGC1A	91	77.895	Cebus_capucinus
ENSORLG00015012206	ppargc1a	99	82.051	ENSCATG00000032575	PPARGC1A	91	78.421	Cercocebus_atys
ENSORLG00015012206	ppargc1a	99	82.895	ENSCLAG00000002058	PPARGC1A	90	77.368	Chinchilla_lanigera
ENSORLG00015012206	ppargc1a	90	82.051	ENSCSAG00000016575	PPARGC1A	91	78.421	Chlorocebus_sabaeus
ENSORLG00015012206	ppargc1a	99	82.051	ENSCANG00000033426	PPARGC1A	91	77.895	Colobus_angolensis_palliatus
ENSORLG00015012206	ppargc1a	100	55.095	ENSCGRG00001015534	Ppargc1a	88	77.368	Cricetulus_griseus_chok1gshd
ENSORLG00015012206	ppargc1a	100	55.095	ENSCGRG00000000200	Ppargc1a	88	77.368	Cricetulus_griseus_crigri
ENSORLG00015012206	ppargc1a	97	94.694	ENSCSEG00000006884	ppargc1a	97	96.537	Cynoglossus_semilaevis
ENSORLG00015012206	ppargc1a	100	69.750	ENSCVAG00000016547	ppargc1a	97	76.689	Cyprinodon_variegatus
ENSORLG00015012206	ppargc1a	91	84.239	ENSDARG00000067829	ppargc1a	93	80.833	Danio_rerio
ENSORLG00015012206	ppargc1a	98	85.484	ENSDNOG00000041106	PPARGC1A	90	77.895	Dasypus_novemcinctus
ENSORLG00015012206	ppargc1a	98	51.617	ENSDORG00000016276	Ppargc1a	98	54.358	Dipodomys_ordii
ENSORLG00015012206	ppargc1a	91	80.488	ENSEASG00005007984	PPARGC1A	91	77.895	Equus_asinus_asinus
ENSORLG00015012206	ppargc1a	89	80.488	ENSECAG00000009164	PPARGC1A	88	78.421	Equus_caballus
ENSORLG00015012206	ppargc1a	98	54.796	ENSEEUG00000009219	PPARGC1A	91	75.789	Erinaceus_europaeus
ENSORLG00015012206	ppargc1a	99	96.053	ENSELUG00000017027	ppargc1a	92	96.053	Esox_lucius
ENSORLG00015012206	ppargc1a	100	54.751	ENSFCAG00000000043	PPARGC1A	72	77.368	Felis_catus
ENSORLG00015012206	ppargc1a	98	54.012	ENSFALG00000009211	PPARGC1A	85	80.899	Ficedula_albicollis
ENSORLG00015012206	ppargc1a	90	84.211	ENSFDAG00000005659	PPARGC1A	91	75.789	Fukomys_damarensis
ENSORLG00015012206	ppargc1a	99	94.606	ENSFHEG00000021990	ppargc1a	100	93.878	Fundulus_heteroclitus
ENSORLG00015012206	ppargc1a	100	54.002	ENSGALG00000042851	PPARGC1A	91	77.895	Gallus_gallus
ENSORLG00015012206	ppargc1a	99	96.053	ENSGAFG00000015514	ppargc1a	100	93.469	Gambusia_affinis
ENSORLG00015012206	ppargc1a	99	53.837	ENSGAGG00000007043	PPARGC1A	86	79.775	Gopherus_agassizii
ENSORLG00015012206	ppargc1a	99	82.051	ENSGGOG00000009810	PPARGC1A	91	78.421	Gorilla_gorilla
ENSORLG00015012206	ppargc1a	97	96.053	ENSHBUG00000005269	ppargc1a	100	95.547	Haplochromis_burtoni
ENSORLG00015012206	ppargc1a	88	86.667	ENSHGLG00000007022	PPARGC1A	91	75.789	Heterocephalus_glaber_female
ENSORLG00015012206	ppargc1a	90	84.211	ENSHGLG00100000133	PPARGC1A	91	75.789	Heterocephalus_glaber_male
ENSORLG00015012206	ppargc1a	99	93.421	ENSHCOG00000014886	ppargc1a	99	84.768	Hippocampus_comes
ENSORLG00015012206	ppargc1a	95	94.737	ENSIPUG00000020313	ppargc1a	50	85.185	Ictalurus_punctatus
ENSORLG00015012206	ppargc1a	89	83.607	ENSSTOG00000012522	PPARGC1A	100	54.708	Ictidomys_tridecemlineatus
ENSORLG00015012206	ppargc1a	99	94.737	ENSKMAG00000005390	ppargc1a	99	84.950	Kryptolebias_marmoratus
ENSORLG00015012206	ppargc1a	99	97.368	ENSLBEG00000019562	ppargc1a	100	94.286	Labrus_bergylta
ENSORLG00015012206	ppargc1a	91	86.628	ENSLACG00000014054	PPARGC1A	88	81.538	Latimeria_chalumnae
ENSORLG00015012206	ppargc1a	69	58.472	ENSLOCG00000012350	ppargc1a	91	84.653	Lepisosteus_oculatus
ENSORLG00015012206	ppargc1a	99	84.211	ENSLAFG00000012981	PPARGC1A	90	77.368	Loxodonta_africana
ENSORLG00015012206	ppargc1a	99	82.051	ENSMFAG00000000534	PPARGC1A	91	78.421	Macaca_fascicularis
ENSORLG00015012206	ppargc1a	90	82.051	ENSMMUG00000001844	PPARGC1A	88	82.051	Macaca_mulatta
ENSORLG00015012206	ppargc1a	99	82.051	ENSMNEG00000028682	PPARGC1A	91	78.421	Macaca_nemestrina
ENSORLG00015012206	ppargc1a	99	82.051	ENSMLEG00000034233	PPARGC1A	91	78.421	Mandrillus_leucophaeus
ENSORLG00015012206	ppargc1a	99	96.053	ENSMAMG00000005531	ppargc1a	99	90.323	Mastacembelus_armatus
ENSORLG00015012206	ppargc1a	97	96.053	ENSMZEG00005001739	ppargc1a	100	79.393	Maylandia_zebra
ENSORLG00015012206	ppargc1a	91	81.818	ENSMGAG00000012485	PPARGC1A	89	81.461	Meleagris_gallopavo
ENSORLG00015012206	ppargc1a	91	78.659	ENSMAUG00000011811	Ppargc1a	88	76.842	Mesocricetus_auratus
ENSORLG00015012206	ppargc1a	91	80.488	ENSMICG00000015390	PPARGC1A	91	78.421	Microcebus_murinus
ENSORLG00015012206	ppargc1a	100	54.804	ENSMOCG00000008765	Ppargc1a	88	76.842	Microtus_ochrogaster
ENSORLG00015012206	ppargc1a	99	94.737	ENSMMOG00000011847	ppargc1a	99	94.545	Mola_mola
ENSORLG00015012206	ppargc1a	63	80.488	ENSMODG00000000549	PPARGC1A	64	84.211	Monodelphis_domestica
ENSORLG00015012206	ppargc1a	97	94.286	ENSMALG00000004625	ppargc1a	95	91.118	Monopterus_albus
ENSORLG00015012206	ppargc1a	90	81.579	MGP_CAROLIEiJ_G0027213	Ppargc1a	83	81.579	Mus_caroli
ENSORLG00015012206	ppargc1a	90	81.579	ENSMUSG00000029167	Ppargc1a	83	81.579	Mus_musculus
ENSORLG00015012206	ppargc1a	90	81.579	MGP_PahariEiJ_G0016995	Ppargc1a	83	81.579	Mus_pahari
ENSORLG00015012206	ppargc1a	100	54.157	MGP_SPRETEiJ_G0028208	Ppargc1a	100	54.491	Mus_spretus
ENSORLG00015012206	ppargc1a	91	80.488	ENSMPUG00000016736	PPARGC1A	72	77.895	Mustela_putorius_furo
ENSORLG00015012206	ppargc1a	99	84.211	ENSMLUG00000016307	PPARGC1A	89	79.775	Myotis_lucifugus
ENSORLG00015012206	ppargc1a	100	51.297	ENSNGAG00000015090	Ppargc1a	100	53.983	Nannospalax_galili
ENSORLG00015012206	ppargc1a	100	82.025	ENSNBRG00000023403	ppargc1a	98	95.547	Neolamprologus_brichardi
ENSORLG00015012206	ppargc1a	99	82.051	ENSNLEG00000016760	PPARGC1A	89	78.421	Nomascus_leucogenys
ENSORLG00015012206	ppargc1a	100	54.299	ENSOPRG00000012899	PPARGC1A	72	77.368	Ochotona_princeps
ENSORLG00015012206	ppargc1a	100	74.648	ENSONIG00000007635	ppargc1a	100	87.137	Oreochromis_niloticus
ENSORLG00015012206	ppargc1a	100	55.582	ENSOANG00000006680	PPARGC1A	71	81.461	Ornithorhynchus_anatinus
ENSORLG00015012206	ppargc1a	100	53.121	ENSOCUG00000014668	PPARGC1A	72	76.842	Oryctolagus_cuniculus
ENSORLG00015012206	ppargc1a	100	99.184	ENSORLG00000004788	ppargc1a	100	99.184	Oryzias_latipes
ENSORLG00015012206	ppargc1a	100	99.184	ENSORLG00020014690	ppargc1a	100	98.974	Oryzias_latipes_hni
ENSORLG00015012206	ppargc1a	99	100.000	ENSOMEG00000000670	ppargc1a	100	98.785	Oryzias_melastigma
ENSORLG00015012206	ppargc1a	100	54.900	ENSOGAG00000014559	PPARGC1A	91	76.842	Otolemur_garnettii
ENSORLG00015012206	ppargc1a	100	54.535	ENSOARG00000005581	PPARGC1A	88	77.895	Ovis_aries
ENSORLG00015012206	ppargc1a	99	82.051	ENSPPAG00000034694	PPARGC1A	90	78.421	Pan_paniscus
ENSORLG00015012206	ppargc1a	100	54.923	ENSPPRG00000001711	PPARGC1A	72	77.368	Panthera_pardus
ENSORLG00015012206	ppargc1a	100	54.923	ENSPTIG00000007378	PPARGC1A	72	77.368	Panthera_tigris_altaica
ENSORLG00015012206	ppargc1a	99	82.051	ENSPTRG00000015954	PPARGC1A	90	78.421	Pan_troglodytes
ENSORLG00015012206	ppargc1a	99	82.051	ENSPANG00000005420	PPARGC1A	91	78.421	Papio_anubis
ENSORLG00015012206	ppargc1a	93	76.596	ENSPKIG00000002531	ppargc1a	86	76.596	Paramormyrops_kingsleyae
ENSORLG00015012206	ppargc1a	100	53.513	ENSPSIG00000011790	PPARGC1A	86	80.337	Pelodiscus_sinensis
ENSORLG00015012206	ppargc1a	100	93.421	ENSPMGG00000019204	ppargc1a	99	80.782	Periophthalmus_magnuspinnatus
ENSORLG00015012206	ppargc1a	100	54.353	ENSPEMG00000010892	Ppargc1a	83	81.579	Peromyscus_maniculatus_bairdii
ENSORLG00015012206	ppargc1a	100	54.923	ENSPCIG00000015835	PPARGC1A	87	79.213	Phascolarctos_cinereus
ENSORLG00015012206	ppargc1a	99	97.368	ENSPFOG00000001263	ppargc1a	99	90.698	Poecilia_formosa
ENSORLG00015012206	ppargc1a	86	97.368	ENSPLAG00000002827	ppargc1a	95	95.082	Poecilia_latipinna
ENSORLG00015012206	ppargc1a	99	97.368	ENSPMEG00000000720	ppargc1a	100	90.228	Poecilia_mexicana
ENSORLG00015012206	ppargc1a	99	97.368	ENSPREG00000019171	ppargc1a	100	94.694	Poecilia_reticulata
ENSORLG00015012206	ppargc1a	90	82.051	ENSPPYG00000014640	PPARGC1A	91	78.421	Pongo_abelii
ENSORLG00015012206	ppargc1a	100	54.751	ENSPCAG00000016308	PPARGC1A	89	76.404	Procavia_capensis
ENSORLG00015012206	ppargc1a	100	55.359	ENSPCOG00000022858	PPARGC1A	91	78.421	Propithecus_coquereli
ENSORLG00015012206	ppargc1a	91	79.878	ENSPVAG00000004965	PPARGC1A	91	77.368	Pteropus_vampyrus
ENSORLG00015012206	ppargc1a	97	96.053	ENSPNYG00000006846	ppargc1a	99	95.547	Pundamilia_nyererei
ENSORLG00015012206	ppargc1a	99	93.421	ENSPNAG00000010393	ppargc1a	98	93.421	Pygocentrus_nattereri
ENSORLG00015012206	ppargc1a	100	54.448	ENSRNOG00000004473	Ppargc1a	70	75.789	Rattus_norvegicus
ENSORLG00015012206	ppargc1a	99	82.051	ENSRBIG00000032333	PPARGC1A	73	77.895	Rhinopithecus_bieti
ENSORLG00015012206	ppargc1a	99	82.051	ENSRROG00000010419	PPARGC1A	91	77.895	Rhinopithecus_roxellana
ENSORLG00015012206	ppargc1a	98	85.484	ENSSBOG00000006423	PPARGC1A	91	77.895	Saimiri_boliviensis_boliviensis
ENSORLG00015012206	ppargc1a	99	84.211	ENSSHAG00000010033	PPARGC1A	80	84.211	Sarcophilus_harrisii
ENSORLG00015012206	ppargc1a	100	50.753	ENSSFOG00015018522	ppargc1a	73	73.913	Scleropages_formosus
ENSORLG00015012206	ppargc1a	81	90.789	ENSSFOG00015001633	ppargc1a	53	90.789	Scleropages_formosus
ENSORLG00015012206	ppargc1a	97	97.368	ENSSMAG00000011571	ppargc1a	93	97.807	Scophthalmus_maximus
ENSORLG00015012206	ppargc1a	100	79.474	ENSSDUG00000007408	ppargc1a	100	78.616	Seriola_dumerili
ENSORLG00015012206	ppargc1a	99	97.368	ENSSLDG00000006987	ppargc1a	93	96.774	Seriola_lalandi_dorsalis
ENSORLG00015012206	ppargc1a	89	79.200	ENSSARG00000000575	PPARGC1A	90	66.803	Sorex_araneus
ENSORLG00015012206	ppargc1a	91	81.707	ENSSPUG00000013556	PPARGC1A	100	55.066	Sphenodon_punctatus
ENSORLG00015012206	ppargc1a	96	96.522	ENSSPAG00000023514	ppargc1a	100	96.735	Stegastes_partitus
ENSORLG00015012206	ppargc1a	100	54.181	ENSSSCG00000029275	PPARGC1A	73	78.421	Sus_scrofa
ENSORLG00015012206	ppargc1a	100	54.407	ENSTGUG00000009487	PPARGC1A	88	80.899	Taeniopygia_guttata
ENSORLG00015012206	ppargc1a	91	69.173	ENSTRUG00000007210	ppargc1a	85	90.698	Takifugu_rubripes
ENSORLG00015012206	ppargc1a	100	53.444	ENSTTRG00000005327	PPARGC1A	69	80.606	Tursiops_truncatus
ENSORLG00015012206	ppargc1a	93	51.008	ENSUAMG00000020843	PPARGC1A	68	77.249	Ursus_americanus
ENSORLG00015012206	ppargc1a	98	54.600	ENSUMAG00000003557	PPARGC1A	72	77.895	Ursus_maritimus
ENSORLG00015012206	ppargc1a	82	80.000	ENSVPAG00000003478	PPARGC1A	81	79.775	Vicugna_pacos
ENSORLG00015012206	ppargc1a	91	80.488	ENSVVUG00000013365	PPARGC1A	72	77.895	Vulpes_vulpes
ENSORLG00015012206	ppargc1a	100	53.717	ENSXETG00000020468	ppargc1a	90	76.966	Xenopus_tropicalis
ENSORLG00015012206	ppargc1a	99	97.368	ENSXCOG00000004835	ppargc1a	97	92.491	Xiphophorus_couchianus
ENSORLG00015012206	ppargc1a	99	94.583	ENSXMAG00000007748	ppargc1a	100	77.839	Xiphophorus_maculatus