EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015012586 (Gene tree)
Gene ID: -
Gene Symbol: arl13b
Alias: -
Full Name: ADP-ribosylation factor-like 13b
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 4786 bases
Position: chr2:22270162-22274947
Accession: ZDB-GENE-021217-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015029426	MMR_HSR1	PF01926.23	1.9e-05	1	1
ENSORLP00015029421	MMR_HSR1	PF01926.23	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015032338	-	2598	-	ENSORLP00015029421	423 (aa)	-	-
ENSORLT00015018672	-	2694	-	ENSORLP00015029426	395 (aa)	-	-

Gene Model

Click here to download ENSORLG00015012586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015012586's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015012586	arl13b	67	43.284	ENSORLG00015011862	arl13a	76	38.801

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015012586	arl13b	100	83.171	ENSAPOG00000013256	arl13b	100	83.415	Acanthochromis_polyacanthus
ENSORLG00015012586	arl13b	99	82.178	ENSACIG00000017582	arl13b	90	95.392	Amphilophus_citrinellus
ENSORLG00015012586	arl13b	100	83.171	ENSAOCG00000002828	arl13b	100	83.415	Amphiprion_ocellaris
ENSORLG00015012586	arl13b	94	82.597	ENSAPEG00000014654	arl13b	99	82.857	Amphiprion_percula
ENSORLG00015012586	arl13b	95	81.074	ENSATEG00000017586	arl13b	97	81.330	Anabas_testudineus
ENSORLG00015012586	arl13b	94	60.337	ENSACAG00000000523	ARL13B	99	59.615	Anolis_carolinensis
ENSORLG00015012586	arl13b	99	79.901	ENSACLG00000024227	arl13b	92	88.940	Astatotilapia_calliptera
ENSORLG00015012586	arl13b	99	74.390	ENSAMXG00000042824	arl13b	99	74.083	Astyanax_mexicanus
ENSORLG00015012586	arl13b	95	56.764	ENSCAPG00000006764	ARL13B	77	79.798	Cavia_aperea
ENSORLG00015012586	arl13b	99	60.101	ENSCPOG00000002558	ARL13B	99	58.629	Cavia_porcellus
ENSORLG00015012586	arl13b	95	58.612	ENSCLAG00000006379	ARL13B	99	57.246	Chinchilla_lanigera
ENSORLG00015012586	arl13b	99	61.982	ENSCPBG00000005599	ARL13B	99	62.212	Chrysemys_picta_bellii
ENSORLG00015012586	arl13b	100	77.073	ENSCSEG00000005258	arl13b	100	77.561	Cynoglossus_semilaevis
ENSORLG00015012586	arl13b	99	82.108	ENSCVAG00000001545	arl13b	99	82.108	Cyprinodon_variegatus
ENSORLG00015012586	arl13b	99	76.847	ENSDARG00000012763	arl13b	99	76.847	Danio_rerio
ENSORLG00015012586	arl13b	68	52.985	ENSEBUG00000006528	arl13b	91	52.985	Eptatretus_burgeri
ENSORLG00015012586	arl13b	79	73.432	ENSEEUG00000010823	ARL13B	99	56.582	Erinaceus_europaeus
ENSORLG00015012586	arl13b	93	57.531	ENSFALG00000001654	ARL13B	99	56.468	Ficedula_albicollis
ENSORLG00015012586	arl13b	99	61.343	ENSFDAG00000006556	ARL13B	99	59.862	Fukomys_damarensis
ENSORLG00015012586	arl13b	94	76.804	ENSFHEG00000016049	arl13b	99	79.688	Fundulus_heteroclitus
ENSORLG00015012586	arl13b	95	68.700	ENSGMOG00000018628	arl13b	99	69.067	Gadus_morhua
ENSORLG00015012586	arl13b	99	78.055	ENSGAFG00000000025	arl13b	99	78.947	Gambusia_affinis
ENSORLG00015012586	arl13b	100	77.586	ENSGACG00000014228	arl13b	100	77.586	Gasterosteus_aculeatus
ENSORLG00015012586	arl13b	99	61.485	ENSGAGG00000019336	ARL13B	99	62.471	Gopherus_agassizii
ENSORLG00015012586	arl13b	99	82.469	ENSHBUG00000020619	arl13b	99	82.630	Haplochromis_burtoni
ENSORLG00015012586	arl13b	94	79.211	ENSHCOG00000006106	arl13b	99	79.211	Hippocampus_comes
ENSORLG00015012586	arl13b	100	84.198	ENSKMAG00000001122	arl13b	99	84.938	Kryptolebias_marmoratus
ENSORLG00015012586	arl13b	100	77.053	ENSLBEG00000014612	arl13b	100	79.268	Labrus_bergylta
ENSORLG00015012586	arl13b	99	69.585	ENSLOCG00000010465	arl13b	99	69.406	Lepisosteus_oculatus
ENSORLG00015012586	arl13b	100	80.000	ENSMAMG00000021452	arl13b	100	80.488	Mastacembelus_armatus
ENSORLG00015012586	arl13b	99	82.222	ENSMZEG00005017827	arl13b	99	82.382	Maylandia_zebra
ENSORLG00015012586	arl13b	100	80.101	ENSMMOG00000010253	arl13b	100	80.101	Mola_mola
ENSORLG00015012586	arl13b	100	74.623	ENSMALG00000014655	arl13b	100	74.623	Monopterus_albus
ENSORLG00015012586	arl13b	99	61.751	MGP_CAROLIEiJ_G0020856	Arl13b	99	62.238	Mus_caroli
ENSORLG00015012586	arl13b	99	61.239	ENSMUSG00000022911	Arl13b	99	61.628	Mus_musculus
ENSORLG00015012586	arl13b	99	60.140	MGP_PahariEiJ_G0016561	Arl13b	99	60.930	Mus_pahari
ENSORLG00015012586	arl13b	99	60.970	MGP_SPRETEiJ_G0021763	Arl13b	99	61.628	Mus_spretus
ENSORLG00015012586	arl13b	95	60.732	ENSMLUG00000017473	ARL13B	96	60.976	Myotis_lucifugus
ENSORLG00015012586	arl13b	99	80.303	ENSNBRG00000004078	arl13b	92	96.070	Neolamprologus_brichardi
ENSORLG00015012586	arl13b	99	59.251	ENSNLEG00000001772	ARL13B	99	59.719	Nomascus_leucogenys
ENSORLG00015012586	arl13b	79	64.344	ENSMEUG00000008036	-	60	64.344	Notamacropus_eugenii
ENSORLG00015012586	arl13b	99	60.606	ENSODEG00000011381	ARL13B	99	61.305	Octodon_degus
ENSORLG00015012586	arl13b	99	78.291	ENSONIG00000001864	arl13b	99	77.726	Oreochromis_niloticus
ENSORLG00015012586	arl13b	100	98.492	ENSORLG00000006350	arl13b	100	98.492	Oryzias_latipes
ENSORLG00015012586	arl13b	100	97.975	ENSORLG00020013754	arl13b	100	97.975	Oryzias_latipes_hni
ENSORLG00015012586	arl13b	55	93.088	ENSOMEG00000010187	arl13b	84	93.088	Oryzias_melastigma
ENSORLG00015012586	arl13b	94	62.195	ENSPSIG00000018115	ARL13B	99	62.195	Pelodiscus_sinensis
ENSORLG00015012586	arl13b	100	79.167	ENSPMGG00000004584	arl13b	100	81.188	Periophthalmus_magnuspinnatus
ENSORLG00015012586	arl13b	99	45.287	ENSPCIG00000026984	ARL13B	97	44.626	Phascolarctos_cinereus
ENSORLG00015012586	arl13b	99	81.141	ENSPFOG00000005379	arl13b	99	81.390	Poecilia_formosa
ENSORLG00015012586	arl13b	94	80.475	ENSPLAG00000008699	arl13b	99	80.739	Poecilia_latipinna
ENSORLG00015012586	arl13b	96	79.949	ENSPMEG00000015387	arl13b	99	80.829	Poecilia_mexicana
ENSORLG00015012586	arl13b	99	79.302	ENSPREG00000006291	arl13b	99	80.050	Poecilia_reticulata
ENSORLG00015012586	arl13b	95	80.106	ENSPNYG00000022879	arl13b	98	80.106	Pundamilia_nyererei
ENSORLG00015012586	arl13b	99	75.306	ENSPNAG00000003803	arl13b	99	76.528	Pygocentrus_nattereri
ENSORLG00015012586	arl13b	54	71.759	ENSSFOG00015023057	arl13b	85	71.759	Scleropages_formosus
ENSORLG00015012586	arl13b	57	83.556	ENSSFOG00015005491	arl13b	83	84.977	Scleropages_formosus
ENSORLG00015012586	arl13b	100	76.119	ENSSMAG00000015450	arl13b	100	76.214	Scophthalmus_maximus
ENSORLG00015012586	arl13b	94	83.636	ENSSDUG00000005560	arl13b	96	83.896	Seriola_dumerili
ENSORLG00015012586	arl13b	94	83.377	ENSSLDG00000013361	arl13b	99	83.636	Seriola_lalandi_dorsalis
ENSORLG00015012586	arl13b	99	61.124	ENSSARG00000003872	ARL13B	99	61.593	Sorex_araneus
ENSORLG00015012586	arl13b	58	81.304	ENSSPUG00000006649	ARL13B	88	80.645	Sphenodon_punctatus
ENSORLG00015012586	arl13b	96	81.472	ENSSPAG00000016442	arl13b	91	81.472	Stegastes_partitus
ENSORLG00015012586	arl13b	99	58.451	ENSTGUG00000013493	ARL13B	99	56.103	Taeniopygia_guttata
ENSORLG00015012586	arl13b	53	73.206	ENSTRUG00000003641	arl13b	74	71.939	Takifugu_rubripes
ENSORLG00015012586	arl13b	99	52.222	ENSTRUG00000013035	-	84	71.889	Takifugu_rubripes
ENSORLG00015012586	arl13b	99	57.143	ENSVVUG00000021511	ARL13B	99	56.909	Vulpes_vulpes
ENSORLG00015012586	arl13b	53	40.376	ENSXETG00000026166	arl13a	50	40.845	Xenopus_tropicalis
ENSORLG00015012586	arl13b	99	61.717	ENSXETG00000032383	ARL13B	100	74.182	Xenopus_tropicalis
ENSORLG00015012586	arl13b	99	78.535	ENSXCOG00000016955	arl13b	99	78.535	Xiphophorus_couchianus
ENSORLG00015012586	arl13b	99	79.648	ENSXMAG00000002089	arl13b	99	80.423	Xiphophorus_maculatus