EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015012735 (Gene tree)
Gene ID: -
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 28544 bases
Position: chr5:11589914-11618457
Accession: ZDB-GENE-180313-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015011786	R3H	PF01424.22	8.7e-11	1	1
ENSORLP00015029467	R3H	PF01424.22	9e-11	1	1
ENSORLP00015029495	R3H	PF01424.22	9.4e-11	1	1
ENSORLP00015029473	R3H	PF01424.22	9.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015018776	-	2832	-	ENSORLP00015011786	943 (aa)	-	-
ENSORLT00015032361	-	6277	-	ENSORLP00015029473	1051 (aa)	-	-
ENSORLT00015018763	-	6232	-	ENSORLP00015029467	1036 (aa)	-	-
ENSORLT00015018850	-	6331	-	ENSORLP00015029495	1069 (aa)	-	-

Gene Model

Click here to download ENSORLG00015012735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015012735's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015012735	r3hdm2	75	55.307	ENSORLG00015017355	r3hdm1	81	57.558

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015012735	r3hdm2	99	64.245	ENSG00000179912	R3HDM2	89	80.556	Homo_sapiens
ENSORLG00015012735	r3hdm2	100	90.203	ENSAPOG00000020341	r3hdm2	100	90.749	Acanthochromis_polyacanthus
ENSORLG00015012735	r3hdm2	95	66.860	ENSAMEG00000004812	R3HDM2	99	64.635	Ailuropoda_melanoleuca
ENSORLG00015012735	r3hdm2	94	91.732	ENSACIG00000016146	r3hdm2	98	90.380	Amphilophus_citrinellus
ENSORLG00015012735	r3hdm2	100	90.414	ENSAOCG00000023694	r3hdm2	100	90.969	Amphiprion_ocellaris
ENSORLG00015012735	r3hdm2	100	90.508	ENSAPEG00000008851	r3hdm2	100	91.063	Amphiprion_percula
ENSORLG00015012735	r3hdm2	100	87.631	ENSATEG00000025024	r3hdm2	100	87.526	Anabas_testudineus
ENSORLG00015012735	r3hdm2	100	57.055	ENSAPLG00000004298	R3HDM2	93	70.208	Anas_platyrhynchos
ENSORLG00015012735	r3hdm2	99	61.998	ENSACAG00000006388	R3HDM2	99	60.205	Anolis_carolinensis
ENSORLG00015012735	r3hdm2	98	61.427	ENSANAG00000031310	-	99	59.524	Aotus_nancymaae
ENSORLG00015012735	r3hdm2	99	64.149	ENSANAG00000025397	-	99	63.228	Aotus_nancymaae
ENSORLG00015012735	r3hdm2	100	90.207	ENSACLG00000019106	r3hdm2	100	90.009	Astatotilapia_calliptera
ENSORLG00015012735	r3hdm2	94	69.010	ENSAMXG00000017180	r3hdm2	99	70.882	Astyanax_mexicanus
ENSORLG00015012735	r3hdm2	99	63.950	ENSBTAG00000018361	R3HDM2	99	63.123	Bos_taurus
ENSORLG00015012735	r3hdm2	99	63.654	ENSCJAG00000007365	R3HDM2	99	63.158	Callithrix_jacchus
ENSORLG00015012735	r3hdm2	99	63.828	ENSCAFG00000000215	R3HDM2	99	63.671	Canis_familiaris
ENSORLG00015012735	r3hdm2	99	65.149	ENSCAFG00020023713	R3HDM2	99	65.460	Canis_lupus_dingo
ENSORLG00015012735	r3hdm2	95	66.896	ENSCHIG00000014022	R3HDM2	99	64.850	Capra_hircus
ENSORLG00015012735	r3hdm2	99	63.576	ENSTSYG00000001449	R3HDM2	99	63.419	Carlito_syrichta
ENSORLG00015012735	r3hdm2	95	67.667	ENSCPOG00000009217	R3HDM2	99	64.624	Cavia_porcellus
ENSORLG00015012735	r3hdm2	89	62.670	ENSCCAG00000026083	R3HDM2	99	63.765	Cebus_capucinus
ENSORLG00015012735	r3hdm2	99	65.038	ENSCATG00000036929	R3HDM2	99	64.601	Cercocebus_atys
ENSORLG00015012735	r3hdm2	95	67.118	ENSCLAG00000011997	R3HDM2	99	65.028	Chinchilla_lanigera
ENSORLG00015012735	r3hdm2	99	65.417	ENSCSAG00000004911	R3HDM2	99	65.352	Chlorocebus_sabaeus
ENSORLG00015012735	r3hdm2	74	66.467	ENSCHOG00000005636	R3HDM2	89	66.335	Choloepus_hoffmanni
ENSORLG00015012735	r3hdm2	99	63.645	ENSCPBG00000013922	R3HDM2	99	62.860	Chrysemys_picta_bellii
ENSORLG00015012735	r3hdm2	99	64.640	ENSCANG00000043807	R3HDM2	99	64.507	Colobus_angolensis_palliatus
ENSORLG00015012735	r3hdm2	99	63.376	ENSCGRG00001017324	R3hdm2	99	62.022	Cricetulus_griseus_chok1gshd
ENSORLG00015012735	r3hdm2	99	63.376	ENSCGRG00000003862	R3hdm2	99	62.022	Cricetulus_griseus_crigri
ENSORLG00015012735	r3hdm2	100	89.414	ENSCSEG00000010925	r3hdm2	99	90.535	Cynoglossus_semilaevis
ENSORLG00015012735	r3hdm2	100	89.100	ENSCVAG00000009058	r3hdm2	100	88.815	Cyprinodon_variegatus
ENSORLG00015012735	r3hdm2	94	71.685	ENSDARG00000102610	r3hdm2	99	73.307	Danio_rerio
ENSORLG00015012735	r3hdm2	99	64.948	ENSDNOG00000015033	R3HDM2	100	65.654	Dasypus_novemcinctus
ENSORLG00015012735	r3hdm2	95	63.945	ENSDORG00000011462	R3hdm2	98	63.002	Dipodomys_ordii
ENSORLG00015012735	r3hdm2	95	67.280	ENSEASG00005007091	R3HDM2	99	64.018	Equus_asinus_asinus
ENSORLG00015012735	r3hdm2	99	65.250	ENSECAG00000003157	R3HDM2	99	65.028	Equus_caballus
ENSORLG00015012735	r3hdm2	100	78.405	ENSELUG00000015969	r3hdm2	100	78.674	Esox_lucius
ENSORLG00015012735	r3hdm2	99	65.306	ENSFCAG00000000192	R3HDM2	98	64.773	Felis_catus
ENSORLG00015012735	r3hdm2	81	62.925	ENSFALG00000000255	R3HDM2	99	59.914	Ficedula_albicollis
ENSORLG00015012735	r3hdm2	99	64.722	ENSFDAG00000019385	R3HDM2	99	64.815	Fukomys_damarensis
ENSORLG00015012735	r3hdm2	100	90.066	ENSFHEG00000016484	r3hdm2	100	89.688	Fundulus_heteroclitus
ENSORLG00015012735	r3hdm2	95	82.209	ENSGMOG00000007961	r3hdm2	100	82.927	Gadus_morhua
ENSORLG00015012735	r3hdm2	99	63.832	ENSGALG00000043736	R3HDM2	99	63.066	Gallus_gallus
ENSORLG00015012735	r3hdm2	100	90.521	ENSGAFG00000013887	r3hdm2	100	90.112	Gambusia_affinis
ENSORLG00015012735	r3hdm2	95	88.086	ENSGACG00000006442	r3hdm2	100	88.184	Gasterosteus_aculeatus
ENSORLG00015012735	r3hdm2	99	63.101	ENSGAGG00000017797	R3HDM2	99	62.095	Gopherus_agassizii
ENSORLG00015012735	r3hdm2	99	65.038	ENSGGOG00000015007	R3HDM2	99	64.574	Gorilla_gorilla
ENSORLG00015012735	r3hdm2	99	65.306	ENSHGLG00000010434	-	99	64.995	Heterocephalus_glaber_female
ENSORLG00015012735	r3hdm2	89	60.161	ENSHGLG00000010421	-	97	58.352	Heterocephalus_glaber_female
ENSORLG00015012735	r3hdm2	99	65.213	ENSHGLG00100004183	-	99	64.903	Heterocephalus_glaber_male
ENSORLG00015012735	r3hdm2	93	58.787	ENSHGLG00100018871	-	96	57.216	Heterocephalus_glaber_male
ENSORLG00015012735	r3hdm2	100	86.817	ENSHCOG00000001142	r3hdm2	97	87.821	Hippocampus_comes
ENSORLG00015012735	r3hdm2	100	74.747	ENSIPUG00000023873	r3hdm2	100	74.378	Ictalurus_punctatus
ENSORLG00015012735	r3hdm2	99	60.971	ENSSTOG00000013424	R3HDM2	99	60.100	Ictidomys_tridecemlineatus
ENSORLG00015012735	r3hdm2	99	64.717	ENSJJAG00000010001	R3hdm2	99	64.253	Jaculus_jaculus
ENSORLG00015012735	r3hdm2	100	90.350	ENSKMAG00000012695	r3hdm2	97	89.962	Kryptolebias_marmoratus
ENSORLG00015012735	r3hdm2	100	90.056	ENSLBEG00000013115	r3hdm2	96	89.963	Labrus_bergylta
ENSORLG00015012735	r3hdm2	95	66.085	ENSLACG00000019064	r3hdm2	100	65.116	Latimeria_chalumnae
ENSORLG00015012735	r3hdm2	99	72.945	ENSLOCG00000005976	r3hdm2	99	72.616	Lepisosteus_oculatus
ENSORLG00015012735	r3hdm2	99	65.488	ENSLAFG00000006510	R3HDM2	99	65.395	Loxodonta_africana
ENSORLG00015012735	r3hdm2	99	65.038	ENSMFAG00000036385	R3HDM2	99	64.789	Macaca_fascicularis
ENSORLG00015012735	r3hdm2	99	65.556	ENSMMUG00000021789	R3HDM2	99	65.338	Macaca_mulatta
ENSORLG00015012735	r3hdm2	99	65.164	ENSMNEG00000025314	R3HDM2	99	64.977	Macaca_nemestrina
ENSORLG00015012735	r3hdm2	99	65.132	ENSMLEG00000028915	R3HDM2	99	64.695	Mandrillus_leucophaeus
ENSORLG00015012735	r3hdm2	100	91.517	ENSMAMG00000009793	r3hdm2	100	91.871	Mastacembelus_armatus
ENSORLG00015012735	r3hdm2	100	89.642	ENSMZEG00005007319	r3hdm2	100	89.444	Maylandia_zebra
ENSORLG00015012735	r3hdm2	99	63.610	ENSMICG00000012389	R3HDM2	99	63.228	Microcebus_murinus
ENSORLG00015012735	r3hdm2	99	64.107	ENSMOCG00000014425	R3hdm2	99	63.158	Microtus_ochrogaster
ENSORLG00015012735	r3hdm2	95	84.631	ENSMMOG00000007448	r3hdm2	99	83.874	Mola_mola
ENSORLG00015012735	r3hdm2	91	82.729	ENSMALG00000010211	r3hdm2	98	85.429	Monopterus_albus
ENSORLG00015012735	r3hdm2	99	64.657	MGP_CAROLIEiJ_G0015896	R3hdm2	99	63.822	Mus_caroli
ENSORLG00015012735	r3hdm2	99	64.810	ENSMUSG00000025404	R3hdm2	99	64.345	Mus_musculus
ENSORLG00015012735	r3hdm2	95	66.085	MGP_PahariEiJ_G0031189	R3hdm2	99	63.796	Mus_pahari
ENSORLG00015012735	r3hdm2	99	64.782	MGP_SPRETEiJ_G0016722	R3hdm2	99	64.319	Mus_spretus
ENSORLG00015012735	r3hdm2	94	66.373	ENSMPUG00000001818	R3HDM2	96	64.011	Mustela_putorius_furo
ENSORLG00015012735	r3hdm2	99	65.709	ENSMLUG00000004980	R3HDM2	99	64.875	Myotis_lucifugus
ENSORLG00015012735	r3hdm2	99	64.668	ENSNGAG00000018800	R3hdm2	99	64.537	Nannospalax_galili
ENSORLG00015012735	r3hdm2	94	89.258	ENSNBRG00000004483	r3hdm2	99	89.147	Neolamprologus_brichardi
ENSORLG00015012735	r3hdm2	99	65.226	ENSNLEG00000017351	R3HDM2	99	64.789	Nomascus_leucogenys
ENSORLG00015012735	r3hdm2	99	56.522	ENSMEUG00000008588	R3HDM2	99	55.453	Notamacropus_eugenii
ENSORLG00015012735	r3hdm2	99	59.476	ENSOPRG00000013670	R3HDM2	99	57.681	Ochotona_princeps
ENSORLG00015012735	r3hdm2	100	87.103	ENSONIG00000005075	r3hdm2	100	86.237	Oreochromis_niloticus
ENSORLG00015012735	r3hdm2	99	65.037	ENSOCUG00000013258	R3HDM2	99	63.579	Oryctolagus_cuniculus
ENSORLG00015012735	r3hdm2	100	99.719	ENSORLG00000005502	r3hdm2	100	99.719	Oryzias_latipes
ENSORLG00015012735	r3hdm2	54	35.577	ENSORLG00000011606	-	74	37.127	Oryzias_latipes
ENSORLG00015012735	r3hdm2	100	99.906	ENSORLG00020017069	r3hdm2	100	99.906	Oryzias_latipes_hni
ENSORLG00015012735	r3hdm2	52	36.088	ENSORLG00020019613	-	66	36.567	Oryzias_latipes_hni
ENSORLG00015012735	r3hdm2	100	91.131	ENSOMEG00000018079	r3hdm2	100	91.309	Oryzias_melastigma
ENSORLG00015012735	r3hdm2	96	56.773	ENSOGAG00000027966	-	99	55.224	Otolemur_garnettii
ENSORLG00015012735	r3hdm2	99	62.429	ENSOGAG00000012055	R3HDM2	99	62.465	Otolemur_garnettii
ENSORLG00015012735	r3hdm2	99	63.559	ENSOARG00000006929	R3HDM2	99	63.037	Ovis_aries
ENSORLG00015012735	r3hdm2	99	65.226	ENSPPAG00000034395	R3HDM2	99	64.789	Pan_paniscus
ENSORLG00015012735	r3hdm2	99	62.430	ENSPPRG00000009240	R3HDM2	99	63.133	Panthera_pardus
ENSORLG00015012735	r3hdm2	99	62.430	ENSPTIG00000008752	R3HDM2	99	63.133	Panthera_tigris_altaica
ENSORLG00015012735	r3hdm2	99	65.132	ENSPTRG00000046457	R3HDM2	99	64.883	Pan_troglodytes
ENSORLG00015012735	r3hdm2	95	65.766	ENSPANG00000024002	R3HDM2	97	64.800	Papio_anubis
ENSORLG00015012735	r3hdm2	100	79.002	ENSPKIG00000003171	r3hdm2	100	79.379	Paramormyrops_kingsleyae
ENSORLG00015012735	r3hdm2	64	55.572	ENSPSIG00000006954	R3HDM2	99	55.275	Pelodiscus_sinensis
ENSORLG00015012735	r3hdm2	94	85.856	ENSPMGG00000007061	r3hdm2	99	86.424	Periophthalmus_magnuspinnatus
ENSORLG00015012735	r3hdm2	99	64.200	ENSPEMG00000015964	R3hdm2	99	63.241	Peromyscus_maniculatus_bairdii
ENSORLG00015012735	r3hdm2	99	63.263	ENSPCIG00000023841	R3HDM2	99	61.964	Phascolarctos_cinereus
ENSORLG00015012735	r3hdm2	94	95.211	ENSPFOG00000006077	r3hdm2	92	95.211	Poecilia_formosa
ENSORLG00015012735	r3hdm2	100	90.900	ENSPLAG00000002971	r3hdm2	100	90.616	Poecilia_latipinna
ENSORLG00015012735	r3hdm2	100	90.900	ENSPMEG00000005330	r3hdm2	100	90.616	Poecilia_mexicana
ENSORLG00015012735	r3hdm2	100	90.427	ENSPREG00000008424	r3hdm2	100	90.142	Poecilia_reticulata
ENSORLG00015012735	r3hdm2	97	60.333	ENSPPYG00000004685	R3HDM2	80	58.325	Pongo_abelii
ENSORLG00015012735	r3hdm2	88	79.859	ENSPCAG00000014642	R3HDM2	92	80.919	Procavia_capensis
ENSORLG00015012735	r3hdm2	99	63.854	ENSPCOG00000013201	R3HDM2	99	62.430	Propithecus_coquereli
ENSORLG00015012735	r3hdm2	99	65.367	ENSPVAG00000003967	R3HDM2	99	63.820	Pteropus_vampyrus
ENSORLG00015012735	r3hdm2	94	83.401	ENSPNYG00000013479	r3hdm2	100	82.688	Pundamilia_nyererei
ENSORLG00015012735	r3hdm2	100	74.457	ENSPNAG00000017473	r3hdm2	100	75.815	Pygocentrus_nattereri
ENSORLG00015012735	r3hdm2	95	65.604	ENSRNOG00000007801	R3hdm2	99	63.309	Rattus_norvegicus
ENSORLG00015012735	r3hdm2	99	62.261	ENSRBIG00000037403	R3HDM2	99	60.226	Rhinopithecus_bieti
ENSORLG00015012735	r3hdm2	99	65.677	ENSRROG00000022271	R3HDM2	99	64.695	Rhinopithecus_roxellana
ENSORLG00015012735	r3hdm2	99	63.844	ENSSBOG00000023547	R3HDM2	99	63.228	Saimiri_boliviensis_boliviensis
ENSORLG00015012735	r3hdm2	99	61.792	ENSSHAG00000003511	R3HDM2	99	62.907	Sarcophilus_harrisii
ENSORLG00015012735	r3hdm2	94	77.374	ENSSFOG00015011219	r3hdm2	99	76.869	Scleropages_formosus
ENSORLG00015012735	r3hdm2	100	89.289	ENSSMAG00000012073	r3hdm2	100	89.100	Scophthalmus_maximus
ENSORLG00015012735	r3hdm2	100	90.028	ENSSDUG00000019269	r3hdm2	100	90.566	Seriola_dumerili
ENSORLG00015012735	r3hdm2	100	89.915	ENSSLDG00000005252	r3hdm2	100	90.359	Seriola_lalandi_dorsalis
ENSORLG00015012735	r3hdm2	90	60.177	ENSSARG00000003958	R3HDM2	94	58.854	Sorex_araneus
ENSORLG00015012735	r3hdm2	95	62.524	ENSSPUG00000014132	R3HDM2	99	59.294	Sphenodon_punctatus
ENSORLG00015012735	r3hdm2	100	89.746	ENSSPAG00000022594	r3hdm2	100	90.593	Stegastes_partitus
ENSORLG00015012735	r3hdm2	99	64.061	ENSSSCG00000026498	R3HDM2	100	65.393	Sus_scrofa
ENSORLG00015012735	r3hdm2	72	63.371	ENSTGUG00000015881	R3HDM2	99	62.516	Taeniopygia_guttata
ENSORLG00015012735	r3hdm2	94	86.557	ENSTRUG00000015075	r3hdm2	98	86.667	Takifugu_rubripes
ENSORLG00015012735	r3hdm2	91	95.068	ENSTNIG00000007057	r3hdm2	89	95.068	Tetraodon_nigroviridis
ENSORLG00015012735	r3hdm2	82	65.052	ENSTBEG00000015967	R3HDM2	78	65.052	Tupaia_belangeri
ENSORLG00015012735	r3hdm2	99	56.134	ENSTTRG00000013082	R3HDM2	94	63.102	Tursiops_truncatus
ENSORLG00015012735	r3hdm2	95	67.258	ENSUAMG00000020913	R3HDM2	99	64.972	Ursus_americanus
ENSORLG00015012735	r3hdm2	91	66.461	ENSUMAG00000019179	R3HDM2	96	64.546	Ursus_maritimus
ENSORLG00015012735	r3hdm2	90	80.456	ENSVPAG00000008656	R3HDM2	91	76.636	Vicugna_pacos
ENSORLG00015012735	r3hdm2	97	65.081	ENSVVUG00000018014	R3HDM2	95	64.801	Vulpes_vulpes
ENSORLG00015012735	r3hdm2	99	61.852	ENSXETG00000017153	r3hdm2	99	59.539	Xenopus_tropicalis
ENSORLG00015012735	r3hdm2	87	89.542	ENSXCOG00000013882	r3hdm2	100	89.424	Xiphophorus_couchianus
ENSORLG00015012735	r3hdm2	100	90.711	ENSXMAG00000017978	r3hdm2	100	90.401	Xiphophorus_maculatus