EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015012746 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 9033 bases
Position: chr16:7205177-7214209
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015029538	POP1	PF06978.11	6e-38	1	2
ENSORLP00015029538	POP1	PF06978.11	6e-38	2	2
ENSORLP00015029538	POPLD	PF08170.12	6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015018882	POP1-201	3615	-	ENSORLP00015029538	954 (aa)	-	-

Gene Model

Click here to download ENSORLG00015012746's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015012746's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015012746	POP1	100	47.843	ENSG00000104356	POP1	100	47.793	Homo_sapiens
ENSORLG00015012746	POP1	100	74.393	ENSAPOG00000008198	pop1	100	74.393	Acanthochromis_polyacanthus
ENSORLG00015012746	POP1	100	47.555	ENSAMEG00000000556	POP1	92	49.631	Ailuropoda_melanoleuca
ENSORLG00015012746	POP1	100	68.884	ENSACIG00000004169	POP1	100	68.270	Amphilophus_citrinellus
ENSORLG00015012746	POP1	100	73.631	ENSAOCG00000010991	pop1	100	73.631	Amphiprion_ocellaris
ENSORLG00015012746	POP1	100	68.012	ENSAPEG00000007607	pop1	100	68.012	Amphiprion_percula
ENSORLG00015012746	POP1	100	73.299	ENSATEG00000024814	POP1	100	73.014	Anabas_testudineus
ENSORLG00015012746	POP1	95	49.843	ENSAPLG00000014418	POP1	99	50.158	Anas_platyrhynchos
ENSORLG00015012746	POP1	99	47.389	ENSACAG00000016083	POP1	100	47.182	Anolis_carolinensis
ENSORLG00015012746	POP1	86	52.537	ENSANAG00000026360	POP1	99	52.537	Aotus_nancymaae
ENSORLG00015012746	POP1	100	71.226	ENSACLG00000010951	pop1	100	71.761	Astatotilapia_calliptera
ENSORLG00015012746	POP1	100	56.735	ENSAMXG00000014483	POP1	100	56.342	Astyanax_mexicanus
ENSORLG00015012746	POP1	100	47.839	ENSBTAG00000012596	POP1	100	47.923	Bos_taurus
ENSORLG00015012746	POP1	62	31.801	WBGene00015486	C05D11.9	67	31.801	Caenorhabditis_elegans
ENSORLG00015012746	POP1	100	47.679	ENSCJAG00000015567	POP1	100	47.826	Callithrix_jacchus
ENSORLG00015012746	POP1	100	48.606	ENSCAFG00000000469	POP1	100	48.115	Canis_familiaris
ENSORLG00015012746	POP1	100	47.379	ENSCAFG00020026765	POP1	100	46.712	Canis_lupus_dingo
ENSORLG00015012746	POP1	100	47.688	ENSCHIG00000017066	POP1	100	47.780	Capra_hircus
ENSORLG00015012746	POP1	100	46.997	ENSTSYG00000003097	POP1	92	48.963	Carlito_syrichta
ENSORLG00015012746	POP1	100	46.570	ENSCAPG00000007251	POP1	92	48.424	Cavia_aperea
ENSORLG00015012746	POP1	100	47.868	ENSCPOG00000002901	POP1	92	49.684	Cavia_porcellus
ENSORLG00015012746	POP1	100	48.120	ENSCCAG00000018939	POP1	100	48.488	Cebus_capucinus
ENSORLG00015012746	POP1	100	47.743	ENSCATG00000040916	POP1	92	49.479	Cercocebus_atys
ENSORLG00015012746	POP1	100	47.721	ENSCLAG00000007208	POP1	89	49.578	Chinchilla_lanigera
ENSORLG00015012746	POP1	92	49.947	ENSCSAG00000012340	POP1	99	50.053	Chlorocebus_sabaeus
ENSORLG00015012746	POP1	94	46.905	ENSCHOG00000011432	POP1	96	46.708	Choloepus_hoffmanni
ENSORLG00015012746	POP1	100	48.625	ENSCPBG00000006373	POP1	100	48.928	Chrysemys_picta_bellii
ENSORLG00015012746	POP1	100	47.605	ENSCANG00000001647	POP1	92	49.583	Colobus_angolensis_palliatus
ENSORLG00015012746	POP1	100	46.094	ENSCGRG00001017308	Pop1	92	48.247	Cricetulus_griseus_chok1gshd
ENSORLG00015012746	POP1	100	43.600	ENSCGRG00000010824	Pop1	100	43.470	Cricetulus_griseus_crigri
ENSORLG00015012746	POP1	100	70.071	ENSCSEG00000008737	POP1	100	70.071	Cynoglossus_semilaevis
ENSORLG00015012746	POP1	100	71.282	ENSCVAG00000022248	pop1	100	70.974	Cyprinodon_variegatus
ENSORLG00015012746	POP1	53	52.652	ENSDARG00000102087	pop1	99	51.670	Danio_rerio
ENSORLG00015012746	POP1	100	44.549	ENSDNOG00000019974	POP1	92	47.089	Dasypus_novemcinctus
ENSORLG00015012746	POP1	100	43.269	ENSDORG00000015384	Pop1	100	41.244	Dipodomys_ordii
ENSORLG00015012746	POP1	88	45.783	ENSETEG00000007839	POP1	80	49.899	Echinops_telfairi
ENSORLG00015012746	POP1	53	44.466	ENSEBUG00000009897	pop1	96	43.874	Eptatretus_burgeri
ENSORLG00015012746	POP1	100	48.073	ENSEASG00005003189	POP1	98	48.120	Equus_asinus_asinus
ENSORLG00015012746	POP1	100	48.081	ENSECAG00000024236	POP1	100	48.081	Equus_caballus
ENSORLG00015012746	POP1	50	73.684	ENSEEUG00000003050	-	53	78.462	Erinaceus_europaeus
ENSORLG00015012746	POP1	100	60.976	ENSELUG00000003526	pop1	100	60.953	Esox_lucius
ENSORLG00015012746	POP1	100	47.150	ENSFCAG00000002168	POP1	92	49.110	Felis_catus
ENSORLG00015012746	POP1	100	47.965	ENSFALG00000005711	POP1	100	48.195	Ficedula_albicollis
ENSORLG00015012746	POP1	100	47.092	ENSFDAG00000017068	POP1	100	47.505	Fukomys_damarensis
ENSORLG00015012746	POP1	100	71.253	ENSFHEG00000019518	pop1	100	71.561	Fundulus_heteroclitus
ENSORLG00015012746	POP1	100	62.513	ENSGMOG00000000659	POP1	100	61.366	Gadus_morhua
ENSORLG00015012746	POP1	100	70.267	ENSGAFG00000019770	POP1	100	69.691	Gambusia_affinis
ENSORLG00015012746	POP1	100	64.491	ENSGACG00000003499	pop1	100	64.176	Gasterosteus_aculeatus
ENSORLG00015012746	POP1	100	48.535	ENSGAGG00000011737	POP1	98	48.833	Gopherus_agassizii
ENSORLG00015012746	POP1	100	47.409	ENSGGOG00000003176	POP1	100	47.839	Gorilla_gorilla
ENSORLG00015012746	POP1	100	71.862	ENSHBUG00000021583	pop1	100	71.862	Haplochromis_burtoni
ENSORLG00015012746	POP1	100	47.348	ENSHGLG00000006029	POP1	92	49.009	Heterocephalus_glaber_female
ENSORLG00015012746	POP1	100	47.348	ENSHGLG00100016879	POP1	92	49.009	Heterocephalus_glaber_male
ENSORLG00015012746	POP1	100	64.264	ENSHCOG00000013888	pop1	100	63.564	Hippocampus_comes
ENSORLG00015012746	POP1	99	56.324	ENSIPUG00000018336	pop1	100	55.917	Ictalurus_punctatus
ENSORLG00015012746	POP1	100	46.770	ENSSTOG00000011455	POP1	89	48.532	Ictidomys_tridecemlineatus
ENSORLG00015012746	POP1	100	46.154	ENSJJAG00000013325	Pop1	100	45.598	Jaculus_jaculus
ENSORLG00015012746	POP1	100	73.216	ENSKMAG00000001346	POP1	100	73.216	Kryptolebias_marmoratus
ENSORLG00015012746	POP1	100	65.047	ENSLBEG00000024457	POP1	100	64.736	Labrus_bergylta
ENSORLG00015012746	POP1	94	51.556	ENSLACG00000012498	POP1	98	52.273	Latimeria_chalumnae
ENSORLG00015012746	POP1	100	54.154	ENSLOCG00000009817	POP1	100	54.474	Lepisosteus_oculatus
ENSORLG00015012746	POP1	100	48.752	ENSLAFG00000010770	POP1	91	51.263	Loxodonta_africana
ENSORLG00015012746	POP1	100	47.893	ENSMFAG00000000347	POP1	92	49.688	Macaca_fascicularis
ENSORLG00015012746	POP1	100	47.751	ENSMNEG00000036870	POP1	92	49.376	Macaca_nemestrina
ENSORLG00015012746	POP1	100	48.031	ENSMLEG00000034986	POP1	92	49.844	Mandrillus_leucophaeus
ENSORLG00015012746	POP1	100	73.003	ENSMAMG00000004040	pop1	100	72.396	Mastacembelus_armatus
ENSORLG00015012746	POP1	100	71.660	ENSMZEG00005025448	pop1	100	71.660	Maylandia_zebra
ENSORLG00015012746	POP1	100	46.780	ENSMGAG00000012167	POP1	100	47.574	Meleagris_gallopavo
ENSORLG00015012746	POP1	100	47.225	ENSMAUG00000017537	Pop1	92	49.364	Mesocricetus_auratus
ENSORLG00015012746	POP1	100	47.419	ENSMICG00000004361	POP1	100	47.587	Microcebus_murinus
ENSORLG00015012746	POP1	100	46.784	ENSMOCG00000006356	Pop1	92	48.674	Microtus_ochrogaster
ENSORLG00015012746	POP1	100	65.589	ENSMMOG00000018242	pop1	100	65.622	Mola_mola
ENSORLG00015012746	POP1	100	46.609	ENSMODG00000006561	POP1	100	46.242	Monodelphis_domestica
ENSORLG00015012746	POP1	100	70.922	ENSMALG00000012621	POP1	100	71.125	Monopterus_albus
ENSORLG00015012746	POP1	100	46.295	MGP_CAROLIEiJ_G0019726	Pop1	92	47.912	Mus_caroli
ENSORLG00015012746	POP1	100	45.962	ENSMUSG00000022325	Pop1	92	47.534	Mus_musculus
ENSORLG00015012746	POP1	100	45.946	MGP_PahariEiJ_G0019735	Pop1	92	47.794	Mus_pahari
ENSORLG00015012746	POP1	100	45.821	MGP_SPRETEiJ_G0020622	Pop1	92	47.544	Mus_spretus
ENSORLG00015012746	POP1	100	47.587	ENSMPUG00000015250	POP1	92	49.475	Mustela_putorius_furo
ENSORLG00015012746	POP1	100	45.472	ENSMLUG00000010204	POP1	100	45.419	Myotis_lucifugus
ENSORLG00015012746	POP1	100	46.911	ENSNGAG00000001582	Pop1	100	46.815	Nannospalax_galili
ENSORLG00015012746	POP1	100	67.351	ENSNBRG00000002356	pop1	100	67.146	Neolamprologus_brichardi
ENSORLG00015012746	POP1	100	47.692	ENSNLEG00000002541	POP1	100	47.404	Nomascus_leucogenys
ENSORLG00015012746	POP1	81	55.114	ENSMEUG00000003118	POP1	90	55.114	Notamacropus_eugenii
ENSORLG00015012746	POP1	100	47.252	ENSOPRG00000007667	POP1	92	49.158	Ochotona_princeps
ENSORLG00015012746	POP1	100	46.929	ENSODEG00000003984	POP1	92	49.161	Octodon_degus
ENSORLG00015012746	POP1	100	72.626	ENSONIG00000016445	pop1	100	72.626	Oreochromis_niloticus
ENSORLG00015012746	POP1	61	47.047	ENSOANG00000001278	-	94	47.047	Ornithorhynchus_anatinus
ENSORLG00015012746	POP1	100	46.941	ENSOCUG00000017400	POP1	92	49.062	Oryctolagus_cuniculus
ENSORLG00015012746	POP1	100	97.170	ENSORLG00000002839	pop1	100	97.170	Oryzias_latipes
ENSORLG00015012746	POP1	100	86.572	ENSORLG00020022450	POP1	100	86.572	Oryzias_latipes_hni
ENSORLG00015012746	POP1	100	86.875	ENSOMEG00000006915	pop1	99	86.979	Oryzias_melastigma
ENSORLG00015012746	POP1	100	47.429	ENSOGAG00000001466	POP1	100	47.454	Otolemur_garnettii
ENSORLG00015012746	POP1	100	47.939	ENSPPAG00000018410	POP1	100	47.889	Pan_paniscus
ENSORLG00015012746	POP1	100	46.686	ENSPPRG00000005002	POP1	92	48.793	Panthera_pardus
ENSORLG00015012746	POP1	100	46.686	ENSPTIG00000016527	POP1	92	48.745	Panthera_tigris_altaica
ENSORLG00015012746	POP1	100	48.035	ENSPTRG00000020458	POP1	100	47.985	Pan_troglodytes
ENSORLG00015012746	POP1	100	48.319	ENSPANG00000009704	POP1	92	49.948	Papio_anubis
ENSORLG00015012746	POP1	100	58.901	ENSPKIG00000016325	POP1	100	59.289	Paramormyrops_kingsleyae
ENSORLG00015012746	POP1	100	47.674	ENSPSIG00000012343	POP1	100	47.822	Pelodiscus_sinensis
ENSORLG00015012746	POP1	100	62.576	ENSPMGG00000022253	POP1	100	61.866	Periophthalmus_magnuspinnatus
ENSORLG00015012746	POP1	99	46.029	ENSPEMG00000023633	Pop1	92	47.871	Peromyscus_maniculatus_bairdii
ENSORLG00015012746	POP1	92	43.920	ENSPMAG00000003209	POP1	100	43.828	Petromyzon_marinus
ENSORLG00015012746	POP1	100	47.560	ENSPCIG00000012216	POP1	93	49.074	Phascolarctos_cinereus
ENSORLG00015012746	POP1	100	70.594	ENSPFOG00000012490	POP1	100	69.980	Poecilia_formosa
ENSORLG00015012746	POP1	100	70.389	ENSPLAG00000004646	POP1	100	69.672	Poecilia_latipinna
ENSORLG00015012746	POP1	100	70.329	ENSPMEG00000019592	POP1	100	69.713	Poecilia_mexicana
ENSORLG00015012746	POP1	100	71.458	ENSPREG00000020951	POP1	100	71.047	Poecilia_reticulata
ENSORLG00015012746	POP1	100	47.943	ENSPPYG00000018777	POP1	100	47.601	Pongo_abelii
ENSORLG00015012746	POP1	100	45.437	ENSPCAG00000016662	POP1	92	47.126	Procavia_capensis
ENSORLG00015012746	POP1	100	47.323	ENSPCOG00000019420	POP1	100	47.262	Propithecus_coquereli
ENSORLG00015012746	POP1	100	46.473	ENSPVAG00000014468	POP1	100	46.635	Pteropus_vampyrus
ENSORLG00015012746	POP1	100	67.901	ENSPNYG00000004476	pop1	100	68.107	Pundamilia_nyererei
ENSORLG00015012746	POP1	100	55.709	ENSPNAG00000000265	pop1	100	55.217	Pygocentrus_nattereri
ENSORLG00015012746	POP1	100	46.257	ENSRNOG00000005243	Pop1	92	48.739	Rattus_norvegicus
ENSORLG00015012746	POP1	100	48.031	ENSRBIG00000007996	POP1	92	50.052	Rhinopithecus_bieti
ENSORLG00015012746	POP1	100	48.031	ENSRROG00000012334	POP1	92	50.052	Rhinopithecus_roxellana
ENSORLG00015012746	POP1	94	49.635	ENSSBOG00000020830	POP1	93	49.687	Saimiri_boliviensis_boliviensis
ENSORLG00015012746	POP1	100	47.353	ENSSHAG00000000296	POP1	100	46.872	Sarcophilus_harrisii
ENSORLG00015012746	POP1	100	58.444	ENSSFOG00015007429	pop1	99	58.240	Scleropages_formosus
ENSORLG00015012746	POP1	100	70.259	ENSSMAG00000010467	POP1	100	70.155	Scophthalmus_maximus
ENSORLG00015012746	POP1	100	72.984	ENSSDUG00000007817	POP1	100	73.085	Seriola_dumerili
ENSORLG00015012746	POP1	100	73.185	ENSSLDG00000012565	POP1	100	73.185	Seriola_lalandi_dorsalis
ENSORLG00015012746	POP1	100	46.415	ENSSPUG00000003550	-	100	46.602	Sphenodon_punctatus
ENSORLG00015012746	POP1	100	71.253	ENSSPAG00000014955	pop1	100	70.842	Stegastes_partitus
ENSORLG00015012746	POP1	100	48.299	ENSSSCG00000006078	POP1	92	50.264	Sus_scrofa
ENSORLG00015012746	POP1	95	46.275	ENSTGUG00000012011	-	100	46.210	Taeniopygia_guttata
ENSORLG00015012746	POP1	100	68.004	ENSTRUG00000010856	pop1	100	67.695	Takifugu_rubripes
ENSORLG00015012746	POP1	94	68.896	ENSTNIG00000013297	pop1	98	68.896	Tetraodon_nigroviridis
ENSORLG00015012746	POP1	94	46.618	ENSTBEG00000014214	POP1	96	46.314	Tupaia_belangeri
ENSORLG00015012746	POP1	100	47.190	ENSTTRG00000016071	POP1	100	46.962	Tursiops_truncatus
ENSORLG00015012746	POP1	99	49.049	ENSUAMG00000017309	POP1	96	49.791	Ursus_americanus
ENSORLG00015012746	POP1	100	47.353	ENSUMAG00000016952	POP1	91	63.690	Ursus_maritimus
ENSORLG00015012746	POP1	86	50.903	ENSVPAG00000008278	POP1	74	62.051	Vicugna_pacos
ENSORLG00015012746	POP1	100	47.195	ENSVVUG00000010994	POP1	100	46.712	Vulpes_vulpes
ENSORLG00015012746	POP1	100	61.245	ENSXCOG00000017043	POP1	100	60.732	Xiphophorus_couchianus
ENSORLG00015012746	POP1	100	69.672	ENSXMAG00000002472	POP1	100	69.672	Xiphophorus_maculatus