EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015012855 (Gene tree)
Gene ID: -
Gene Symbol: sf1
Alias: -
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 16327 bases
Position: chr18:28927680-28944006
Accession: ZDB-GENE-030131-2492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015012029	KH_1	PF00013.29	3.2e-06	1	1
ENSORLP00015012029	zf-CCHC	PF00098.23	0.00051	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015019030	-	6153	-	ENSORLP00015012029	677 (aa)	-	-

Gene Model

Click here to download ENSORLG00015012855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015012855's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015012855	sf1	69	86.555	ENSAPOG00000012341	sf1	68	87.555	Acanthochromis_polyacanthus
ENSORLG00015012855	sf1	59	76.499	ENSAMEG00000017828	SF1	58	80.366	Ailuropoda_melanoleuca
ENSORLG00015012855	sf1	69	86.765	ENSAOCG00000010934	sf1	68	87.773	Amphiprion_ocellaris
ENSORLG00015012855	sf1	69	86.765	ENSAPEG00000009498	sf1	68	87.773	Amphiprion_percula
ENSORLG00015012855	sf1	66	87.473	ENSATEG00000001894	sf1	68	86.900	Anabas_testudineus
ENSORLG00015012855	sf1	85	63.980	ENSANAG00000022607	-	89	71.693	Aotus_nancymaae
ENSORLG00015012855	sf1	59	76.611	ENSANAG00000026664	-	89	80.577	Aotus_nancymaae
ENSORLG00015012855	sf1	68	82.479	ENSAMXG00000003630	sf1	60	83.480	Astyanax_mexicanus
ENSORLG00015012855	sf1	59	76.259	ENSBTAG00000001035	SF1	62	80.366	Bos_taurus
ENSORLG00015012855	sf1	59	76.499	ENSCJAG00000002780	SF1	75	67.568	Callithrix_jacchus
ENSORLG00015012855	sf1	59	76.259	ENSCAFG00000014239	SF1	58	80.105	Canis_familiaris
ENSORLG00015012855	sf1	59	76.259	ENSCAFG00020014381	SF1	58	80.366	Canis_lupus_dingo
ENSORLG00015012855	sf1	59	76.499	ENSCHIG00000025867	SF1	68	80.105	Capra_hircus
ENSORLG00015012855	sf1	59	71.535	ENSTSYG00000033618	SF1	81	93.455	Carlito_syrichta
ENSORLG00015012855	sf1	58	76.755	ENSCAPG00000010762	SF1	66	80.688	Cavia_aperea
ENSORLG00015012855	sf1	59	76.499	ENSCPOG00000012290	SF1	69	80.423	Cavia_porcellus
ENSORLG00015012855	sf1	59	76.499	ENSCCAG00000037881	SF1	89	80.577	Cebus_capucinus
ENSORLG00015012855	sf1	57	70.529	ENSCCAG00000023781	-	83	71.129	Cebus_capucinus
ENSORLG00015012855	sf1	59	76.499	ENSCATG00000011564	SF1	89	80.577	Cercocebus_atys
ENSORLG00015012855	sf1	59	76.499	ENSCSAG00000007258	SF1	68	80.105	Chlorocebus_sabaeus
ENSORLG00015012855	sf1	56	71.106	ENSCHOG00000006008	SF1	67	74.380	Choloepus_hoffmanni
ENSORLG00015012855	sf1	59	57.554	ENSCING00000005564	-	92	56.156	Ciona_intestinalis
ENSORLG00015012855	sf1	53	54.974	ENSCSAVG00000009055	-	63	62.567	Ciona_savignyi
ENSORLG00015012855	sf1	59	76.259	ENSCANG00000042201	SF1	89	80.577	Colobus_angolensis_palliatus
ENSORLG00015012855	sf1	59	76.978	ENSCGRG00001003677	Sf1	65	80.890	Cricetulus_griseus_chok1gshd
ENSORLG00015012855	sf1	58	77.240	ENSCGRG00000001708	Sf1	68	81.217	Cricetulus_griseus_crigri
ENSORLG00015012855	sf1	70	86.694	ENSCSEG00000014375	sf1	66	87.965	Cynoglossus_semilaevis
ENSORLG00015012855	sf1	66	89.207	ENSCVAG00000001670	sf1	68	88.621	Cyprinodon_variegatus
ENSORLG00015012855	sf1	68	79.531	ENSDARG00000008188	sf1	65	89.757	Danio_rerio
ENSORLG00015012855	sf1	59	76.978	ENSDNOG00000001282	SF1	68	80.105	Dasypus_novemcinctus
ENSORLG00015012855	sf1	59	76.555	ENSDORG00000016334	Sf1	58	80.418	Dipodomys_ordii
ENSORLG00015012855	sf1	59	76.499	ENSEASG00005018272	SF1	68	80.105	Equus_asinus_asinus
ENSORLG00015012855	sf1	59	76.739	ENSECAG00000024544	SF1	68	80.366	Equus_caballus
ENSORLG00015012855	sf1	52	76.944	ENSEEUG00000001058	SF1	84	80.473	Erinaceus_europaeus
ENSORLG00015012855	sf1	70	80.652	ENSELUG00000013225	sf1	61	84.052	Esox_lucius
ENSORLG00015012855	sf1	59	76.499	ENSFCAG00000012231	SF1	75	67.636	Felis_catus
ENSORLG00015012855	sf1	58	76.755	ENSFDAG00000009833	SF1	66	80.688	Fukomys_damarensis
ENSORLG00015012855	sf1	66	88.962	ENSFHEG00000022656	sf1	68	88.596	Fundulus_heteroclitus
ENSORLG00015012855	sf1	62	82.506	ENSGMOG00000007469	sf1	64	88.418	Gadus_morhua
ENSORLG00015012855	sf1	66	88.106	ENSGAFG00000019284	sf1	74	87.746	Gambusia_affinis
ENSORLG00015012855	sf1	55	91.711	ENSGACG00000000826	sf1	64	92.453	Gasterosteus_aculeatus
ENSORLG00015012855	sf1	62	79.206	ENSGAGG00000021691	SF1	68	70.143	Gopherus_agassizii
ENSORLG00015012855	sf1	66	87.885	ENSHBUG00000011598	sf1	67	87.965	Haplochromis_burtoni
ENSORLG00015012855	sf1	59	76.499	ENSHGLG00000009541	SF1	65	80.366	Heterocephalus_glaber_female
ENSORLG00015012855	sf1	55	69.287	ENSHGLG00100008255	-	71	75.775	Heterocephalus_glaber_male
ENSORLG00015012855	sf1	58	76.755	ENSHGLG00100013879	-	66	80.688	Heterocephalus_glaber_male
ENSORLG00015012855	sf1	68	84.289	ENSHCOG00000011388	sf1	68	85.621	Hippocampus_comes
ENSORLG00015012855	sf1	64	66.890	ENSSTOG00000024353	-	68	70.284	Ictidomys_tridecemlineatus
ENSORLG00015012855	sf1	58	76.755	ENSSTOG00000009790	-	59	80.688	Ictidomys_tridecemlineatus
ENSORLG00015012855	sf1	59	76.499	ENSJJAG00000011788	Sf1	58	80.628	Jaculus_jaculus
ENSORLG00015012855	sf1	68	86.596	ENSKMAG00000005854	sf1	70	86.900	Kryptolebias_marmoratus
ENSORLG00015012855	sf1	66	87.013	ENSLBEG00000019836	sf1	73	86.825	Labrus_bergylta
ENSORLG00015012855	sf1	66	78.992	ENSLOCG00000002130	sf1	67	79.202	Lepisosteus_oculatus
ENSORLG00015012855	sf1	59	77.966	ENSLAFG00000007201	SF1	63	81.481	Loxodonta_africana
ENSORLG00015012855	sf1	59	76.259	ENSMFAG00000033122	SF1	89	80.577	Macaca_fascicularis
ENSORLG00015012855	sf1	59	76.499	ENSMMUG00000022606	SF1	91	80.105	Macaca_mulatta
ENSORLG00015012855	sf1	59	76.499	ENSMNEG00000037901	SF1	89	80.577	Macaca_nemestrina
ENSORLG00015012855	sf1	61	74.023	ENSMLEG00000040706	SF1	89	80.902	Mandrillus_leucophaeus
ENSORLG00015012855	sf1	66	89.254	ENSMAMG00000001780	sf1	68	88.478	Mastacembelus_armatus
ENSORLG00015012855	sf1	66	87.885	ENSMZEG00005009196	sf1	67	87.965	Maylandia_zebra
ENSORLG00015012855	sf1	59	76.978	ENSMAUG00000014064	Sf1	65	80.890	Mesocricetus_auratus
ENSORLG00015012855	sf1	59	76.499	ENSMICG00000001202	SF1	89	80.366	Microcebus_murinus
ENSORLG00015012855	sf1	59	76.739	ENSMOCG00000022038	Sf1	65	80.890	Microtus_ochrogaster
ENSORLG00015012855	sf1	66	84.768	ENSMMOG00000020474	sf1	67	84.211	Mola_mola
ENSORLG00015012855	sf1	59	76.794	ENSMODG00000029407	SF1	81	80.366	Monodelphis_domestica
ENSORLG00015012855	sf1	66	83.370	ENSMALG00000020521	sf1	73	82.637	Monopterus_albus
ENSORLG00015012855	sf1	59	76.978	MGP_CAROLIEiJ_G0022607	Sf1	99	94.737	Mus_caroli
ENSORLG00015012855	sf1	59	76.978	ENSMUSG00000024949	Sf1	99	94.737	Mus_musculus
ENSORLG00015012855	sf1	59	76.978	MGP_PahariEiJ_G0014101	Sf1	99	94.737	Mus_pahari
ENSORLG00015012855	sf1	59	76.978	MGP_SPRETEiJ_G0023518	Sf1	99	94.737	Mus_spretus
ENSORLG00015012855	sf1	59	76.259	ENSMPUG00000012684	SF1	58	80.366	Mustela_putorius_furo
ENSORLG00015012855	sf1	59	76.978	ENSMLUG00000015217	-	58	80.366	Myotis_lucifugus
ENSORLG00015012855	sf1	62	73.636	ENSMLUG00000029800	-	64	76.963	Myotis_lucifugus
ENSORLG00015012855	sf1	59	76.739	ENSNGAG00000005550	Sf1	65	80.628	Nannospalax_galili
ENSORLG00015012855	sf1	59	76.739	ENSNLEG00000005236	-	89	80.577	Nomascus_leucogenys
ENSORLG00015012855	sf1	58	76.829	ENSMEUG00000013424	SF1	69	80.533	Notamacropus_eugenii
ENSORLG00015012855	sf1	52	76.408	ENSOPRG00000005008	SF1	66	80.473	Ochotona_princeps
ENSORLG00015012855	sf1	59	74.101	ENSODEG00000006102	-	59	77.749	Octodon_degus
ENSORLG00015012855	sf1	66	87.665	ENSONIG00000015728	sf1	67	87.746	Oreochromis_niloticus
ENSORLG00015012855	sf1	59	76.259	ENSOCUG00000026486	SF1	59	80.105	Oryctolagus_cuniculus
ENSORLG00015012855	sf1	100	98.671	ENSORLG00000011853	sf1	100	98.671	Oryzias_latipes
ENSORLG00015012855	sf1	100	98.671	ENSORLG00020011834	sf1	100	98.671	Oryzias_latipes_hni
ENSORLG00015012855	sf1	100	92.805	ENSOMEG00000005210	sf1	100	92.805	Oryzias_melastigma
ENSORLG00015012855	sf1	59	76.259	ENSOGAG00000016196	SF1	59	80.105	Otolemur_garnettii
ENSORLG00015012855	sf1	59	76.499	ENSOARG00000009166	SF1	65	80.105	Ovis_aries
ENSORLG00015012855	sf1	59	77.218	ENSPPAG00000002799	-	91	80.577	Pan_paniscus
ENSORLG00015012855	sf1	59	76.499	ENSPPRG00000013566	SF1	58	81.370	Panthera_pardus
ENSORLG00015012855	sf1	59	76.499	ENSPTIG00000016141	SF1	69	78.517	Panthera_tigris_altaica
ENSORLG00015012855	sf1	60	76.706	ENSPTRG00000003846	SF1	89	80.577	Pan_troglodytes
ENSORLG00015012855	sf1	59	76.499	ENSPANG00000020754	SF1	89	80.577	Papio_anubis
ENSORLG00015012855	sf1	59	76.978	ENSPEMG00000010463	Sf1	65	80.890	Peromyscus_maniculatus_bairdii
ENSORLG00015012855	sf1	59	76.739	ENSPCIG00000018173	SF1	60	80.366	Phascolarctos_cinereus
ENSORLG00015012855	sf1	66	88.767	ENSPFOG00000013683	sf1	68	88.184	Poecilia_formosa
ENSORLG00015012855	sf1	91	82.154	ENSPLAG00000018076	sf1	63	88.537	Poecilia_latipinna
ENSORLG00015012855	sf1	66	88.767	ENSPMEG00000005726	sf1	68	88.403	Poecilia_mexicana
ENSORLG00015012855	sf1	66	88.987	ENSPREG00000004155	sf1	68	88.621	Poecilia_reticulata
ENSORLG00015012855	sf1	59	76.499	ENSPPYG00000003098	-	71	80.105	Pongo_abelii
ENSORLG00015012855	sf1	59	76.259	ENSPCAG00000013631	SF1	75	67.054	Procavia_capensis
ENSORLG00015012855	sf1	73	69.088	ENSPCOG00000027546	SF1	89	80.366	Propithecus_coquereli
ENSORLG00015012855	sf1	59	76.739	ENSPVAG00000016938	SF1	75	68.039	Pteropus_vampyrus
ENSORLG00015012855	sf1	66	88.326	ENSPNYG00000004673	sf1	67	87.746	Pundamilia_nyererei
ENSORLG00015012855	sf1	66	82.819	ENSPNAG00000013072	sf1	67	82.705	Pygocentrus_nattereri
ENSORLG00015012855	sf1	59	76.978	ENSRNOG00000021085	Sf1	61	79.936	Rattus_norvegicus
ENSORLG00015012855	sf1	59	76.499	ENSRBIG00000042818	SF1	89	80.577	Rhinopithecus_bieti
ENSORLG00015012855	sf1	59	76.316	ENSRROG00000045655	SF1	89	80.902	Rhinopithecus_roxellana
ENSORLG00015012855	sf1	81	63.793	ENSSBOG00000022267	-	85	70.739	Saimiri_boliviensis_boliviensis
ENSORLG00015012855	sf1	59	78.133	ENSSHAG00000006841	SF1	71	81.250	Sarcophilus_harrisii
ENSORLG00015012855	sf1	69	78.794	ENSSFOG00015021978	sf1	66	79.610	Scleropages_formosus
ENSORLG00015012855	sf1	84	81.588	ENSSMAG00000007549	sf1	71	87.013	Scophthalmus_maximus
ENSORLG00015012855	sf1	66	89.059	ENSSDUG00000003903	sf1	70	88.720	Seriola_dumerili
ENSORLG00015012855	sf1	66	89.059	ENSSLDG00000013075	sf1	68	88.720	Seriola_lalandi_dorsalis
ENSORLG00015012855	sf1	58	72.155	ENSSARG00000008180	SF1	71	75.926	Sorex_araneus
ENSORLG00015012855	sf1	59	77.622	ENSSPUG00000012907	SF1	59	85.196	Sphenodon_punctatus
ENSORLG00015012855	sf1	69	87.815	ENSSPAG00000019060	sf1	68	88.865	Stegastes_partitus
ENSORLG00015012855	sf1	59	76.978	ENSSSCG00000013021	SF1	68	80.105	Sus_scrofa
ENSORLG00015012855	sf1	73	72.106	ENSTNIG00000004820	sf1	72	76.215	Tetraodon_nigroviridis
ENSORLG00015012855	sf1	58	72.525	ENSTBEG00000013133	SF1	54	75.335	Tupaia_belangeri
ENSORLG00015012855	sf1	58	72.397	ENSTTRG00000008857	SF1	68	75.661	Tursiops_truncatus
ENSORLG00015012855	sf1	59	77.805	ENSUMAG00000007268	SF1	72	80.366	Ursus_maritimus
ENSORLG00015012855	sf1	59	76.499	ENSVVUG00000028585	SF1	68	80.105	Vulpes_vulpes
ENSORLG00015012855	sf1	86	72.034	ENSXETG00000008434	sf1	62	86.150	Xenopus_tropicalis
ENSORLG00015012855	sf1	53	92.308	ENSXCOG00000003704	sf1	70	90.323	Xiphophorus_couchianus
ENSORLG00015012855	sf1	66	88.326	ENSXMAG00000007822	sf1	70	87.965	Xiphophorus_maculatus