EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015012909 (Gene tree)
Gene ID: -
Gene Symbol: ttf2
Alias: -
Full Name: transcription termination factor 2
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 23206 bases
Position: chr21:11842130-11865335
Accession: 101163698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015012051	ResIII	PF04851.15	6.3e-08	1	1
ENSORLP00015029661	ResIII	PF04851.15	6.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015019112	-	4197	-	ENSORLP00015029661	1136 (aa)	-	-
ENSORLT00015032465	-	3902	XM_004081620	ENSORLP00015012051	1112 (aa)	XP_004081668	-
ENSORLT00015019026	-	3770	-	ENSORLP00015029641	1068 (aa)	-	-

Gene Model

Click here to download ENSORLG00015012909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015012909's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015012909	ttf2	50	39.024	ENSORLG00015017166	hltf	77	30.110

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015012909	ttf2	100	69.284	ENSAPOG00000016882	ttf2	100	69.459	Acanthochromis_polyacanthus
ENSORLG00015012909	ttf2	100	66.725	ENSACIG00000005837	ttf2	100	66.753	Amphilophus_citrinellus
ENSORLG00015012909	ttf2	100	69.244	ENSAOCG00000001866	ttf2	100	69.592	Amphiprion_ocellaris
ENSORLG00015012909	ttf2	100	69.244	ENSAPEG00000022425	ttf2	100	69.418	Amphiprion_percula
ENSORLG00015012909	ttf2	100	68.150	ENSATEG00000002050	ttf2	100	68.412	Anabas_testudineus
ENSORLG00015012909	ttf2	86	60.774	ENSACAG00000010769	-	81	59.795	Anolis_carolinensis
ENSORLG00015012909	ttf2	100	67.454	ENSACLG00000018148	ttf2	100	67.426	Astatotilapia_calliptera
ENSORLG00015012909	ttf2	96	59.481	ENSAMXG00000016683	ttf2	97	59.048	Astyanax_mexicanus
ENSORLG00015012909	ttf2	100	47.735	ENSCJAG00000005909	-	100	47.819	Callithrix_jacchus
ENSORLG00015012909	ttf2	99	61.041	ENSCPBG00000020902	-	92	60.792	Chrysemys_picta_bellii
ENSORLG00015012909	ttf2	100	48.516	ENSCGRG00001006277	-	100	47.871	Cricetulus_griseus_chok1gshd
ENSORLG00015012909	ttf2	100	48.346	ENSCGRG00000017781	-	100	47.700	Cricetulus_griseus_crigri
ENSORLG00015012909	ttf2	100	65.704	ENSCSEG00000008842	ttf2	100	65.118	Cynoglossus_semilaevis
ENSORLG00015012909	ttf2	99	69.767	ENSCVAG00000000795	ttf2	100	69.052	Cyprinodon_variegatus
ENSORLG00015012909	ttf2	100	59.574	ENSDARG00000104105	ttf2	100	59.234	Danio_rerio
ENSORLG00015012909	ttf2	98	53.371	ENSEASG00005006374	-	93	53.034	Equus_asinus_asinus
ENSORLG00015012909	ttf2	100	47.615	ENSFDAG00000019681	-	100	47.189	Fukomys_damarensis
ENSORLG00015012909	ttf2	100	67.277	ENSFHEG00000014849	ttf2	100	67.338	Fundulus_heteroclitus
ENSORLG00015012909	ttf2	100	59.342	ENSGMOG00000015604	ttf2	100	57.651	Gadus_morhua
ENSORLG00015012909	ttf2	100	62.888	ENSGACG00000001351	ttf2	100	62.799	Gasterosteus_aculeatus
ENSORLG00015012909	ttf2	99	48.933	ENSGAGG00000001126	-	99	48.973	Gopherus_agassizii
ENSORLG00015012909	ttf2	99	67.627	ENSHBUG00000003595	ttf2	99	67.627	Haplochromis_burtoni
ENSORLG00015012909	ttf2	84	69.685	ENSHCOG00000018006	ttf2	97	66.015	Hippocampus_comes
ENSORLG00015012909	ttf2	100	59.779	ENSIPUG00000003123	ttf2	100	59.184	Ictalurus_punctatus
ENSORLG00015012909	ttf2	100	68.293	ENSKMAG00000013535	ttf2	100	68.380	Kryptolebias_marmoratus
ENSORLG00015012909	ttf2	100	66.139	ENSMAMG00000020428	ttf2	100	66.232	Mastacembelus_armatus
ENSORLG00015012909	ttf2	100	67.243	ENSMZEG00005019186	ttf2	100	67.650	Maylandia_zebra
ENSORLG00015012909	ttf2	100	49.828	ENSMAUG00000016725	-	100	49.610	Mesocricetus_auratus
ENSORLG00015012909	ttf2	100	63.264	ENSMMOG00000019490	ttf2	100	63.787	Mola_mola
ENSORLG00015012909	ttf2	100	67.711	ENSONIG00000015742	ttf2	100	67.916	Oreochromis_niloticus
ENSORLG00015012909	ttf2	100	97.572	ENSORLG00020009694	ttf2	100	97.572	Oryzias_latipes_hni
ENSORLG00015012909	ttf2	99	84.846	ENSOMEG00000009786	ttf2	100	83.666	Oryzias_melastigma
ENSORLG00015012909	ttf2	93	59.155	ENSPMGG00000018367	ttf2	98	58.967	Periophthalmus_magnuspinnatus
ENSORLG00015012909	ttf2	100	67.511	ENSPFOG00000006601	ttf2	100	67.454	Poecilia_formosa
ENSORLG00015012909	ttf2	100	67.308	ENSPLAG00000006236	ttf2	100	67.250	Poecilia_latipinna
ENSORLG00015012909	ttf2	100	67.511	ENSPMEG00000022477	ttf2	100	67.454	Poecilia_mexicana
ENSORLG00015012909	ttf2	100	66.724	ENSPNYG00000006961	ttf2	100	66.810	Pundamilia_nyererei
ENSORLG00015012909	ttf2	100	58.292	ENSPNAG00000018988	ttf2	99	57.877	Pygocentrus_nattereri
ENSORLG00015012909	ttf2	100	67.189	ENSSLDG00000019476	ttf2	100	67.016	Seriola_lalandi_dorsalis
ENSORLG00015012909	ttf2	100	68.718	ENSSPAG00000002204	ttf2	100	68.544	Stegastes_partitus
ENSORLG00015012909	ttf2	99	67.835	ENSXCOG00000018307	ttf2	100	67.199	Xiphophorus_couchianus
ENSORLG00015012909	ttf2	100	68.102	ENSXMAG00000014772	ttf2	100	67.399	Xiphophorus_maculatus