EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015012924 (Gene tree)
Gene ID: -
Gene Symbol: mtrex
Alias: -
Full Name: Oryzias latipes Mtr4 exosome RNA helicase (mtrex)%2C mRNA.
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 20909 bases
Position: chr12:8827886-8848794
Accession: NM_001164882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015011915	rRNA_proc-arch	PF13234.6	7.5e-88	1	1
ENSORLP00015029555	rRNA_proc-arch	PF13234.6	8e-88	1	1
ENSORLP00015011915	DEAD	PF00270.29	5.2e-17	1	1
ENSORLP00015029555	DEAD	PF00270.29	5.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015018915	-	3224	-	ENSORLP00015029555	1036 (aa)	-	-
ENSORLT00015032397	-	2994	-	ENSORLP00015011915	997 (aa)	-	-

Gene Model

Click here to download ENSORLG00015012924's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015012924's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015012924	mtrex	94	34.568	ENSORLG00015016750	skiv2l	80	35.494

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015012924	mtrex	100	82.173	ENSG00000039123	MTREX	100	82.364	Homo_sapiens
ENSORLG00015012924	mtrex	100	93.153	ENSAPOG00000007814	mtrex	100	92.960	Acanthochromis_polyacanthus
ENSORLG00015012924	mtrex	100	82.476	ENSAMEG00000013856	MTREX	100	82.476	Ailuropoda_melanoleuca
ENSORLG00015012924	mtrex	98	92.566	ENSACIG00000015117	mtrex	98	92.464	Amphilophus_citrinellus
ENSORLG00015012924	mtrex	100	93.250	ENSAOCG00000011884	mtrex	100	93.057	Amphiprion_ocellaris
ENSORLG00015012924	mtrex	100	93.153	ENSAPEG00000019384	mtrex	100	92.960	Amphiprion_percula
ENSORLG00015012924	mtrex	100	93.147	ENSATEG00000015117	mtrex	100	93.147	Anabas_testudineus
ENSORLG00015012924	mtrex	94	86.610	ENSAPLG00000009694	MTREX	98	86.066	Anas_platyrhynchos
ENSORLG00015012924	mtrex	100	83.668	ENSACAG00000015200	MTREX	96	83.668	Anolis_carolinensis
ENSORLG00015012924	mtrex	100	82.459	ENSANAG00000023095	MTREX	100	82.650	Aotus_nancymaae
ENSORLG00015012924	mtrex	100	92.478	ENSACLG00000001921	mtrex	100	92.382	Astatotilapia_calliptera
ENSORLG00015012924	mtrex	95	86.322	ENSAMXG00000018751	mtrex	99	86.322	Astyanax_mexicanus
ENSORLG00015012924	mtrex	100	82.555	ENSBTAG00000010518	MTREX	100	82.555	Bos_taurus
ENSORLG00015012924	mtrex	93	53.714	WBGene00012342	mtr-4	91	53.822	Caenorhabditis_elegans
ENSORLG00015012924	mtrex	100	81.801	ENSCJAG00000001773	MTREX	100	81.775	Callithrix_jacchus
ENSORLG00015012924	mtrex	100	82.459	ENSCAFG00000006818	MTREX	100	82.459	Canis_familiaris
ENSORLG00015012924	mtrex	100	82.459	ENSCAFG00020024352	MTREX	100	82.459	Canis_lupus_dingo
ENSORLG00015012924	mtrex	100	82.269	ENSCHIG00000024413	MTREX	100	82.146	Capra_hircus
ENSORLG00015012924	mtrex	93	84.560	ENSTSYG00000007389	MTREX	100	84.560	Carlito_syrichta
ENSORLG00015012924	mtrex	87	75.455	ENSCAPG00000008696	MTREX	92	75.455	Cavia_aperea
ENSORLG00015012924	mtrex	100	82.521	ENSCPOG00000009797	MTREX	100	82.526	Cavia_porcellus
ENSORLG00015012924	mtrex	100	82.459	ENSCCAG00000014177	MTREX	100	82.650	Cebus_capucinus
ENSORLG00015012924	mtrex	100	82.364	ENSCATG00000042153	MTREX	100	82.555	Cercocebus_atys
ENSORLG00015012924	mtrex	100	82.555	ENSCLAG00000006622	MTREX	100	82.650	Chinchilla_lanigera
ENSORLG00015012924	mtrex	100	78.612	ENSCSAG00000016445	MTREX	100	78.802	Chlorocebus_sabaeus
ENSORLG00015012924	mtrex	61	97.222	ENSCHOG00000010936	-	62	97.222	Choloepus_hoffmanni
ENSORLG00015012924	mtrex	100	83.654	ENSCPBG00000026551	MTREX	94	83.654	Chrysemys_picta_bellii
ENSORLG00015012924	mtrex	99	64.981	ENSCING00000003239	-	99	65.263	Ciona_intestinalis
ENSORLG00015012924	mtrex	99	64.430	ENSCSAVG00000009304	-	100	68.991	Ciona_savignyi
ENSORLG00015012924	mtrex	100	82.555	ENSCANG00000035770	MTREX	100	82.555	Colobus_angolensis_palliatus
ENSORLG00015012924	mtrex	100	82.667	ENSCGRG00001024680	Mtrex	100	82.667	Cricetulus_griseus_chok1gshd
ENSORLG00015012924	mtrex	100	82.667	ENSCGRG00000000307	Mtrex	100	82.667	Cricetulus_griseus_crigri
ENSORLG00015012924	mtrex	100	90.927	ENSCSEG00000018621	mtrex	98	90.927	Cynoglossus_semilaevis
ENSORLG00015012924	mtrex	100	93.250	ENSCVAG00000004556	mtrex	100	93.250	Cyprinodon_variegatus
ENSORLG00015012924	mtrex	100	86.416	ENSDARG00000013457	mtrex	100	86.416	Danio_rerio
ENSORLG00015012924	mtrex	100	82.303	ENSDNOG00000015375	MTREX	100	82.303	Dasypus_novemcinctus
ENSORLG00015012924	mtrex	100	82.139	ENSDORG00000006782	Mtrex	100	82.258	Dipodomys_ordii
ENSORLG00015012924	mtrex	99	61.668	FBgn0001986	Mtr4	99	61.748	Drosophila_melanogaster
ENSORLG00015012924	mtrex	90	66.977	ENSETEG00000000727	MTREX	90	66.977	Echinops_telfairi
ENSORLG00015012924	mtrex	99	72.517	ENSEBUG00000012869	mtrex	99	72.517	Eptatretus_burgeri
ENSORLG00015012924	mtrex	100	82.713	ENSEASG00005013270	MTREX	100	82.713	Equus_asinus_asinus
ENSORLG00015012924	mtrex	100	82.808	ENSECAG00000023723	MTREX	100	88.372	Equus_caballus
ENSORLG00015012924	mtrex	98	74.951	ENSEEUG00000000527	MTREX	100	74.710	Erinaceus_europaeus
ENSORLG00015012924	mtrex	98	87.602	ENSELUG00000004898	mtrex	100	91.071	Esox_lucius
ENSORLG00015012924	mtrex	100	82.745	ENSFCAG00000010575	MTREX	100	82.745	Felis_catus
ENSORLG00015012924	mtrex	100	81.906	ENSFALG00000010850	MTREX	100	81.906	Ficedula_albicollis
ENSORLG00015012924	mtrex	100	82.330	ENSFDAG00000011199	MTREX	100	82.330	Fukomys_damarensis
ENSORLG00015012924	mtrex	100	91.900	ENSFHEG00000023014	mtrex	100	88.580	Fundulus_heteroclitus
ENSORLG00015012924	mtrex	100	84.571	ENSGMOG00000014702	mtrex	100	85.053	Gadus_morhua
ENSORLG00015012924	mtrex	100	83.237	ENSGALG00000014709	MTREX	86	83.237	Gallus_gallus
ENSORLG00015012924	mtrex	100	92.382	ENSGAFG00000012425	mtrex	100	92.382	Gambusia_affinis
ENSORLG00015012924	mtrex	100	87.066	ENSGACG00000016260	mtrex	96	91.621	Gasterosteus_aculeatus
ENSORLG00015012924	mtrex	100	83.269	ENSGAGG00000020036	MTREX	100	83.269	Gopherus_agassizii
ENSORLG00015012924	mtrex	100	82.269	ENSGGOG00000001867	MTREX	100	82.459	Gorilla_gorilla
ENSORLG00015012924	mtrex	100	92.478	ENSHBUG00000006229	mtrex	100	92.382	Haplochromis_burtoni
ENSORLG00015012924	mtrex	100	82.330	ENSHGLG00000019445	SKIV2L2	100	82.330	Heterocephalus_glaber_female
ENSORLG00015012924	mtrex	100	82.330	ENSHGLG00100011833	SKIV2L2	100	82.330	Heterocephalus_glaber_male
ENSORLG00015012924	mtrex	94	89.741	ENSHCOG00000019995	mtrex	100	89.399	Hippocampus_comes
ENSORLG00015012924	mtrex	100	85.645	ENSIPUG00000024348	skiv2l2	100	85.453	Ictalurus_punctatus
ENSORLG00015012924	mtrex	100	82.493	ENSSTOG00000010802	MTREX	100	82.683	Ictidomys_tridecemlineatus
ENSORLG00015012924	mtrex	100	77.885	ENSJJAG00000020975	Mtrex	100	77.778	Jaculus_jaculus
ENSORLG00015012924	mtrex	100	92.575	ENSKMAG00000012642	mtrex	100	92.575	Kryptolebias_marmoratus
ENSORLG00015012924	mtrex	100	92.671	ENSLBEG00000019367	mtrex	100	92.478	Labrus_bergylta
ENSORLG00015012924	mtrex	100	83.062	ENSLACG00000009075	MTREX	100	83.189	Latimeria_chalumnae
ENSORLG00015012924	mtrex	100	85.481	ENSLOCG00000010186	mtrex	100	85.192	Lepisosteus_oculatus
ENSORLG00015012924	mtrex	99	80.306	ENSLAFG00000010497	MTREX	100	80.323	Loxodonta_africana
ENSORLG00015012924	mtrex	100	82.364	ENSMFAG00000031610	MTREX	100	82.555	Macaca_fascicularis
ENSORLG00015012924	mtrex	100	82.431	ENSMMUG00000010379	MTREX	100	82.493	Macaca_mulatta
ENSORLG00015012924	mtrex	100	82.364	ENSMNEG00000032746	MTREX	100	82.555	Macaca_nemestrina
ENSORLG00015012924	mtrex	100	82.364	ENSMLEG00000041051	MTREX	100	82.555	Mandrillus_leucophaeus
ENSORLG00015012924	mtrex	98	92.449	ENSMAMG00000016753	mtrex	98	94.064	Mastacembelus_armatus
ENSORLG00015012924	mtrex	100	92.478	ENSMZEG00005000414	mtrex	100	92.382	Maylandia_zebra
ENSORLG00015012924	mtrex	95	61.694	ENSMGAG00000003980	MTREX	99	61.492	Meleagris_gallopavo
ENSORLG00015012924	mtrex	100	82.667	ENSMAUG00000010727	Mtrex	100	82.667	Mesocricetus_auratus
ENSORLG00015012924	mtrex	100	82.650	ENSMICG00000012779	MTREX	100	82.716	Microcebus_murinus
ENSORLG00015012924	mtrex	100	82.330	ENSMOCG00000019886	Mtrex	100	82.459	Microtus_ochrogaster
ENSORLG00015012924	mtrex	98	92.269	ENSMMOG00000002476	mtrex	98	92.269	Mola_mola
ENSORLG00015012924	mtrex	100	83.269	ENSMODG00000019494	MTREX	100	83.365	Monodelphis_domestica
ENSORLG00015012924	mtrex	99	86.468	ENSMALG00000002917	mtrex	99	89.070	Monopterus_albus
ENSORLG00015012924	mtrex	100	82.173	MGP_CAROLIEiJ_G0018896	Mtrex	100	82.173	Mus_caroli
ENSORLG00015012924	mtrex	100	82.235	ENSMUSG00000016018	Mtrex	100	82.269	Mus_musculus
ENSORLG00015012924	mtrex	100	82.139	MGP_PahariEiJ_G0015967	Mtrex	100	82.173	Mus_pahari
ENSORLG00015012924	mtrex	100	82.235	MGP_SPRETEiJ_G0019775	Mtrex	100	82.269	Mus_spretus
ENSORLG00015012924	mtrex	100	82.555	ENSMPUG00000007619	MTREX	100	82.745	Mustela_putorius_furo
ENSORLG00015012924	mtrex	100	82.000	ENSMLUG00000001152	MTREX	100	82.095	Myotis_lucifugus
ENSORLG00015012924	mtrex	100	82.303	ENSNGAG00000011938	Mtrex	100	82.621	Nannospalax_galili
ENSORLG00015012924	mtrex	100	92.382	ENSNBRG00000011293	mtrex	100	92.285	Neolamprologus_brichardi
ENSORLG00015012924	mtrex	100	78.653	ENSNLEG00000001494	MTREX	100	78.592	Nomascus_leucogenys
ENSORLG00015012924	mtrex	83	96.078	ENSMEUG00000006496	-	83	96.078	Notamacropus_eugenii
ENSORLG00015012924	mtrex	100	70.115	ENSOPRG00000008009	MTREX	100	70.115	Ochotona_princeps
ENSORLG00015012924	mtrex	100	81.888	ENSODEG00000017234	MTREX	100	82.078	Octodon_degus
ENSORLG00015012924	mtrex	100	92.093	ENSONIG00000007587	mtrex	100	91.996	Oreochromis_niloticus
ENSORLG00015012924	mtrex	52	83.721	ENSOANG00000004885	-	99	83.721	Ornithorhynchus_anatinus
ENSORLG00015012924	mtrex	100	82.808	ENSOCUG00000004463	MTREX	100	82.808	Oryctolagus_cuniculus
ENSORLG00015012924	mtrex	100	99.710	ENSORLG00000005443	mtrex	100	99.710	Oryzias_latipes
ENSORLG00015012924	mtrex	100	99.710	ENSORLG00020006329	mtrex	100	99.710	Oryzias_latipes_hni
ENSORLG00015012924	mtrex	100	97.979	ENSOMEG00000008825	mtrex	100	97.979	Oryzias_melastigma
ENSORLG00015012924	mtrex	100	82.207	ENSOGAG00000002886	MTREX	100	82.716	Otolemur_garnettii
ENSORLG00015012924	mtrex	100	82.034	ENSOARG00000007764	MTREX	100	81.913	Ovis_aries
ENSORLG00015012924	mtrex	100	82.414	ENSPPAG00000039291	MTREX	100	82.555	Pan_paniscus
ENSORLG00015012924	mtrex	100	82.745	ENSPPRG00000019701	MTREX	100	82.745	Panthera_pardus
ENSORLG00015012924	mtrex	100	81.316	ENSPTIG00000009313	MTREX	100	81.316	Panthera_tigris_altaica
ENSORLG00015012924	mtrex	100	82.414	ENSPTRG00000016878	MTREX	100	82.555	Pan_troglodytes
ENSORLG00015012924	mtrex	100	82.269	ENSPANG00000009697	MTREX	100	82.459	Papio_anubis
ENSORLG00015012924	mtrex	100	85.632	ENSPKIG00000020833	mtrex	100	85.632	Paramormyrops_kingsleyae
ENSORLG00015012924	mtrex	100	83.173	ENSPSIG00000012150	MTREX	100	83.142	Pelodiscus_sinensis
ENSORLG00015012924	mtrex	100	87.861	ENSPMGG00000002582	mtrex	100	87.861	Periophthalmus_magnuspinnatus
ENSORLG00015012924	mtrex	95	65.081	ENSPMAG00000009668	mtrex	100	65.015	Petromyzon_marinus
ENSORLG00015012924	mtrex	94	87.500	ENSPCIG00000024730	MTREX	100	87.605	Phascolarctos_cinereus
ENSORLG00015012924	mtrex	77	94.948	ENSPFOG00000003141	mtrex	100	95.051	Poecilia_formosa
ENSORLG00015012924	mtrex	100	93.057	ENSPLAG00000021311	mtrex	100	93.057	Poecilia_latipinna
ENSORLG00015012924	mtrex	95	93.143	ENSPMEG00000010597	mtrex	99	93.626	Poecilia_mexicana
ENSORLG00015012924	mtrex	100	92.960	ENSPREG00000003089	mtrex	100	92.960	Poecilia_reticulata
ENSORLG00015012924	mtrex	94	87.128	ENSPPYG00000015469	MTREX	98	82.171	Pongo_abelii
ENSORLG00015012924	mtrex	94	72.558	ENSPCAG00000013120	MTREX	94	72.558	Procavia_capensis
ENSORLG00015012924	mtrex	99	76.883	ENSPCOG00000018092	MTREX	100	76.883	Propithecus_coquereli
ENSORLG00015012924	mtrex	100	82.459	ENSPVAG00000002445	MTREX	100	82.650	Pteropus_vampyrus
ENSORLG00015012924	mtrex	100	92.382	ENSPNYG00000006164	mtrex	100	92.285	Pundamilia_nyererei
ENSORLG00015012924	mtrex	100	86.994	ENSPNAG00000008794	mtrex	100	87.187	Pygocentrus_nattereri
ENSORLG00015012924	mtrex	94	87.021	ENSRNOG00000010125	Mtrex	97	82.012	Rattus_norvegicus
ENSORLG00015012924	mtrex	100	80.553	ENSRBIG00000034930	MTREX	100	80.839	Rhinopithecus_bieti
ENSORLG00015012924	mtrex	100	82.269	ENSRROG00000039895	MTREX	100	82.555	Rhinopithecus_roxellana
ENSORLG00015012924	mtrex	94	53.668	YJL050W	MTR4	99	50.876	Saccharomyces_cerevisiae
ENSORLG00015012924	mtrex	100	82.459	ENSSBOG00000026693	MTREX	100	82.650	Saimiri_boliviensis_boliviensis
ENSORLG00015012924	mtrex	96	85.271	ENSSHAG00000004600	MTREX	99	85.271	Sarcophilus_harrisii
ENSORLG00015012924	mtrex	100	86.635	ENSSFOG00015014355	skiv2l2	100	86.635	Scleropages_formosus
ENSORLG00015012924	mtrex	100	91.610	ENSSMAG00000007572	mtrex	100	91.321	Scophthalmus_maximus
ENSORLG00015012924	mtrex	100	92.671	ENSSDUG00000023789	mtrex	100	92.671	Seriola_dumerili
ENSORLG00015012924	mtrex	100	92.768	ENSSLDG00000006301	mtrex	100	92.768	Seriola_lalandi_dorsalis
ENSORLG00015012924	mtrex	94	86.915	ENSSARG00000008387	MTREX	100	80.934	Sorex_araneus
ENSORLG00015012924	mtrex	89	85.240	ENSSPUG00000007071	MTREX	96	85.240	Sphenodon_punctatus
ENSORLG00015012924	mtrex	98	89.531	ENSSPAG00000011319	mtrex	98	89.332	Stegastes_partitus
ENSORLG00015012924	mtrex	100	82.605	ENSSSCG00000016911	MTREX	100	82.795	Sus_scrofa
ENSORLG00015012924	mtrex	100	81.460	ENSTGUG00000002480	MTREX	100	81.460	Taeniopygia_guttata
ENSORLG00015012924	mtrex	100	90.260	ENSTRUG00000014571	mtrex	100	90.164	Takifugu_rubripes
ENSORLG00015012924	mtrex	100	68.126	ENSTBEG00000007769	MTREX	100	68.281	Tupaia_belangeri
ENSORLG00015012924	mtrex	100	82.571	ENSTTRG00000008678	MTREX	100	82.571	Tursiops_truncatus
ENSORLG00015012924	mtrex	100	82.459	ENSUAMG00000023061	MTREX	100	82.336	Ursus_americanus
ENSORLG00015012924	mtrex	100	82.596	ENSUMAG00000009373	MTREX	99	88.343	Ursus_maritimus
ENSORLG00015012924	mtrex	100	73.639	ENSVPAG00000011174	MTREX	100	73.448	Vicugna_pacos
ENSORLG00015012924	mtrex	100	82.555	ENSVVUG00000021337	MTREX	100	82.650	Vulpes_vulpes
ENSORLG00015012924	mtrex	100	84.601	ENSXETG00000032798	MTREX	100	84.601	Xenopus_tropicalis
ENSORLG00015012924	mtrex	100	92.382	ENSXMAG00000004799	mtrex	100	92.382	Xiphophorus_maculatus