EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015013027 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 50819 bases
Position: chr21:11773404-11824222
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015012169	TUDOR	PF00567.24	9.1e-84	1	4
ENSORLP00015012169	TUDOR	PF00567.24	9.1e-84	2	4
ENSORLP00015012169	TUDOR	PF00567.24	9.1e-84	3	4
ENSORLP00015012169	TUDOR	PF00567.24	9.1e-84	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015032513	-	5506	-	ENSORLP00015012169	1552 (aa)	-	-

Gene Model

Click here to download ENSORLG00015013027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015013027's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015013027	-	98	32.280	ENSG00000132972	RNF17	98	36.571	Homo_sapiens
ENSORLG00015013027	-	90	56.150	ENSAPOG00000017034	rnf17	97	55.872	Acanthochromis_polyacanthus
ENSORLG00015013027	-	98	31.231	ENSAMEG00000017340	RNF17	97	31.122	Ailuropoda_melanoleuca
ENSORLG00015013027	-	99	57.675	ENSAOCG00000018283	rnf17	99	57.702	Amphiprion_ocellaris
ENSORLG00015013027	-	89	52.552	ENSAPEG00000022338	rnf17	96	52.221	Amphiprion_percula
ENSORLG00015013027	-	90	55.657	ENSATEG00000002067	rnf17	99	55.657	Anabas_testudineus
ENSORLG00015013027	-	87	31.237	ENSAPLG00000003969	RNF17	83	33.117	Anas_platyrhynchos
ENSORLG00015013027	-	76	34.606	ENSACAG00000001418	RNF17	75	34.719	Anolis_carolinensis
ENSORLG00015013027	-	99	55.826	ENSACLG00000018279	rnf17	99	55.993	Astatotilapia_calliptera
ENSORLG00015013027	-	92	44.813	ENSAMXG00000011002	rnf17	99	44.728	Astyanax_mexicanus
ENSORLG00015013027	-	59	35.812	ENSBTAG00000000278	RNF17	98	35.812	Bos_taurus
ENSORLG00015013027	-	98	31.303	ENSCJAG00000018937	RNF17	98	37.366	Callithrix_jacchus
ENSORLG00015013027	-	95	31.170	ENSCAFG00000007418	RNF17	96	30.623	Canis_familiaris
ENSORLG00015013027	-	56	40.000	ENSCAFG00020002919	-	98	34.901	Canis_lupus_dingo
ENSORLG00015013027	-	98	31.140	ENSCHIG00000026716	RNF17	98	35.812	Capra_hircus
ENSORLG00015013027	-	98	31.112	ENSTSYG00000000365	RNF17	97	35.575	Carlito_syrichta
ENSORLG00015013027	-	65	31.173	ENSCAPG00000012908	RNF17	75	31.173	Cavia_aperea
ENSORLG00015013027	-	98	30.952	ENSCCAG00000026725	RNF17	97	35.964	Cebus_capucinus
ENSORLG00015013027	-	98	31.487	ENSCATG00000040352	RNF17	98	36.419	Cercocebus_atys
ENSORLG00015013027	-	91	34.897	ENSCLAG00000004127	RNF17	88	34.738	Chinchilla_lanigera
ENSORLG00015013027	-	98	31.522	ENSCSAG00000018019	RNF17	97	31.231	Chlorocebus_sabaeus
ENSORLG00015013027	-	92	31.848	ENSCPBG00000020920	RNF17	97	31.530	Chrysemys_picta_bellii
ENSORLG00015013027	-	98	31.053	ENSCANG00000032927	RNF17	98	36.874	Colobus_angolensis_palliatus
ENSORLG00015013027	-	89	36.460	ENSCGRG00001022658	Rnf17	86	35.628	Cricetulus_griseus_chok1gshd
ENSORLG00015013027	-	89	36.460	ENSCGRG00000009924	Rnf17	86	35.628	Cricetulus_griseus_crigri
ENSORLG00015013027	-	99	46.226	ENSCSEG00000008626	rnf17	97	48.788	Cynoglossus_semilaevis
ENSORLG00015013027	-	85	48.115	ENSCVAG00000017008	rnf17	96	58.430	Cyprinodon_variegatus
ENSORLG00015013027	-	99	41.741	ENSDARG00000056387	rnf17	99	41.497	Danio_rerio
ENSORLG00015013027	-	89	34.044	ENSDNOG00000006115	RNF17	86	34.046	Dasypus_novemcinctus
ENSORLG00015013027	-	58	40.179	ENSEASG00005001421	-	98	40.179	Equus_asinus_asinus
ENSORLG00015013027	-	98	31.968	ENSECAG00000017152	RNF17	96	31.227	Equus_caballus
ENSORLG00015013027	-	60	31.169	ENSEEUG00000000332	RNF17	58	42.254	Erinaceus_europaeus
ENSORLG00015013027	-	99	45.567	ENSELUG00000005626	rnf17	99	45.050	Esox_lucius
ENSORLG00015013027	-	98	31.231	ENSFCAG00000004914	RNF17	99	35.435	Felis_catus
ENSORLG00015013027	-	92	31.508	ENSFALG00000008766	RNF17	79	33.635	Ficedula_albicollis
ENSORLG00015013027	-	99	53.443	ENSFHEG00000014822	rnf17	99	53.153	Fundulus_heteroclitus
ENSORLG00015013027	-	79	67.797	ENSGAFG00000004463	rnf17	94	67.797	Gambusia_affinis
ENSORLG00015013027	-	52	55.385	ENSGACG00000001340	-	100	55.385	Gasterosteus_aculeatus
ENSORLG00015013027	-	91	30.389	ENSGAGG00000016999	RNF17	90	30.057	Gopherus_agassizii
ENSORLG00015013027	-	98	31.815	ENSGGOG00000014491	RNF17	98	36.571	Gorilla_gorilla
ENSORLG00015013027	-	99	55.950	ENSHBUG00000003554	rnf17	99	56.117	Haplochromis_burtoni
ENSORLG00015013027	-	75	35.155	ENSHGLG00000007270	RNF17	73	34.200	Heterocephalus_glaber_female
ENSORLG00015013027	-	98	31.716	ENSHGLG00100017393	RNF17	97	30.998	Heterocephalus_glaber_male
ENSORLG00015013027	-	81	44.690	ENSHCOG00000017676	rnf17	94	44.182	Hippocampus_comes
ENSORLG00015013027	-	89	46.252	ENSIPUG00000001087	rnf17	93	46.252	Ictalurus_punctatus
ENSORLG00015013027	-	64	33.835	ENSSTOG00000011255	-	99	34.135	Ictidomys_tridecemlineatus
ENSORLG00015013027	-	89	35.012	ENSJJAG00000016584	Rnf17	87	34.575	Jaculus_jaculus
ENSORLG00015013027	-	99	57.295	ENSKMAG00000013403	rnf17	99	57.044	Kryptolebias_marmoratus
ENSORLG00015013027	-	90	52.937	ENSLBEG00000014910	rnf17	96	52.238	Labrus_bergylta
ENSORLG00015013027	-	88	32.534	ENSLACG00000000323	RNF17	99	32.530	Latimeria_chalumnae
ENSORLG00015013027	-	100	35.670	ENSLOCG00000010768	rnf17	99	35.162	Lepisosteus_oculatus
ENSORLG00015013027	-	98	31.401	ENSMFAG00000032388	RNF17	98	36.419	Macaca_fascicularis
ENSORLG00015013027	-	98	31.712	ENSMMUG00000014610	RNF17	98	36.419	Macaca_mulatta
ENSORLG00015013027	-	98	31.401	ENSMNEG00000011234	RNF17	98	36.419	Macaca_nemestrina
ENSORLG00015013027	-	98	31.344	ENSMLEG00000030227	RNF17	97	31.085	Mandrillus_leucophaeus
ENSORLG00015013027	-	80	55.556	ENSMAMG00000020403	rnf17	93	55.556	Mastacembelus_armatus
ENSORLG00015013027	-	99	56.012	ENSMZEG00005019166	rnf17	99	56.180	Maylandia_zebra
ENSORLG00015013027	-	78	31.690	ENSMGAG00000015138	RNF17	96	31.807	Meleagris_gallopavo
ENSORLG00015013027	-	98	32.010	ENSMAUG00000004788	Rnf17	97	31.538	Mesocricetus_auratus
ENSORLG00015013027	-	98	31.281	ENSMICG00000010364	RNF17	98	35.426	Microcebus_murinus
ENSORLG00015013027	-	60	36.261	ENSMOCG00000011818	-	99	35.274	Microtus_ochrogaster
ENSORLG00015013027	-	81	52.771	ENSMMOG00000019514	rnf17	93	52.685	Mola_mola
ENSORLG00015013027	-	76	35.214	ENSMODG00000007827	RNF17	96	31.231	Monodelphis_domestica
ENSORLG00015013027	-	89	51.517	ENSMALG00000016943	rnf17	99	50.388	Monopterus_albus
ENSORLG00015013027	-	89	35.895	MGP_CAROLIEiJ_G0019337	Rnf17	87	35.656	Mus_caroli
ENSORLG00015013027	-	89	35.790	ENSMUSG00000000365	Rnf17	87	35.550	Mus_musculus
ENSORLG00015013027	-	89	35.954	MGP_PahariEiJ_G0030355	Rnf17	87	35.632	Mus_pahari
ENSORLG00015013027	-	89	36.036	MGP_SPRETEiJ_G0020228	Rnf17	87	35.796	Mus_spretus
ENSORLG00015013027	-	98	31.250	ENSMPUG00000013305	RNF17	97	31.157	Mustela_putorius_furo
ENSORLG00015013027	-	75	35.045	ENSMLUG00000003903	RNF17	97	31.238	Myotis_lucifugus
ENSORLG00015013027	-	89	35.304	ENSNGAG00000013553	Rnf17	87	34.906	Nannospalax_galili
ENSORLG00015013027	-	80	58.939	ENSNBRG00000012006	rnf17	91	58.939	Neolamprologus_brichardi
ENSORLG00015013027	-	98	31.152	ENSNLEG00000013780	RNF17	98	36.280	Nomascus_leucogenys
ENSORLG00015013027	-	81	43.939	ENSOPRG00000016743	-	51	43.939	Ochotona_princeps
ENSORLG00015013027	-	50	32.470	ENSODEG00000005443	-	97	32.308	Octodon_degus
ENSORLG00015013027	-	100	55.106	ENSONIG00000015746	rnf17	100	57.311	Oreochromis_niloticus
ENSORLG00015013027	-	98	31.582	ENSOCUG00000007384	RNF17	97	31.188	Oryctolagus_cuniculus
ENSORLG00015013027	-	89	98.035	ENSORLG00000012818	rnf17	99	98.035	Oryzias_latipes
ENSORLG00015013027	-	100	98.325	ENSORLG00020009879	-	100	98.325	Oryzias_latipes_hni
ENSORLG00015013027	-	80	81.197	ENSOMEG00000009891	rnf17	97	80.165	Oryzias_melastigma
ENSORLG00015013027	-	98	30.338	ENSOGAG00000014803	RNF17	97	30.446	Otolemur_garnettii
ENSORLG00015013027	-	98	31.434	ENSOARG00000014641	RNF17	99	31.269	Ovis_aries
ENSORLG00015013027	-	78	35.016	ENSPPAG00000028779	RNF17	98	36.738	Pan_paniscus
ENSORLG00015013027	-	98	31.566	ENSPPRG00000009230	RNF17	99	35.586	Panthera_pardus
ENSORLG00015013027	-	98	31.628	ENSPTIG00000001738	RNF17	99	35.586	Panthera_tigris_altaica
ENSORLG00015013027	-	98	32.339	ENSPTRG00000005713	RNF17	98	36.738	Pan_troglodytes
ENSORLG00015013027	-	98	31.432	ENSPANG00000007640	RNF17	98	36.419	Papio_anubis
ENSORLG00015013027	-	85	40.788	ENSPKIG00000001648	rnf17	91	43.308	Paramormyrops_kingsleyae
ENSORLG00015013027	-	75	35.184	ENSPSIG00000011245	RNF17	99	35.780	Pelodiscus_sinensis
ENSORLG00015013027	-	89	36.349	ENSPEMG00000008693	Rnf17	86	35.854	Peromyscus_maniculatus_bairdii
ENSORLG00015013027	-	70	34.327	ENSPCIG00000009190	-	92	33.812	Phascolarctos_cinereus
ENSORLG00015013027	-	100	54.800	ENSPFOG00000007124	rnf17	100	54.670	Poecilia_formosa
ENSORLG00015013027	-	100	55.549	ENSPLAG00000006198	rnf17	99	55.416	Poecilia_latipinna
ENSORLG00015013027	-	100	55.737	ENSPMEG00000022432	rnf17	99	55.542	Poecilia_mexicana
ENSORLG00015013027	-	82	61.404	ENSPREG00000001414	rnf17	91	61.404	Poecilia_reticulata
ENSORLG00015013027	-	98	31.413	ENSPPYG00000005215	RNF17	97	31.223	Pongo_abelii
ENSORLG00015013027	-	72	44.853	ENSPVAG00000013021	RNF17	72	44.853	Pteropus_vampyrus
ENSORLG00015013027	-	93	45.408	ENSPNAG00000027505	rnf17	99	48.129	Pygocentrus_nattereri
ENSORLG00015013027	-	89	36.118	ENSRNOG00000008059	Rnf17	87	35.878	Rattus_norvegicus
ENSORLG00015013027	-	98	31.404	ENSRBIG00000027010	RNF17	97	30.881	Rhinopithecus_bieti
ENSORLG00015013027	-	98	31.367	ENSRROG00000022801	RNF17	98	36.722	Rhinopithecus_roxellana
ENSORLG00015013027	-	98	31.118	ENSSBOG00000021661	RNF17	99	36.486	Saimiri_boliviensis_boliviensis
ENSORLG00015013027	-	98	31.250	ENSSHAG00000005609	RNF17	97	30.811	Sarcophilus_harrisii
ENSORLG00015013027	-	75	41.137	ENSSFOG00015023037	rnf17	89	41.306	Scleropages_formosus
ENSORLG00015013027	-	90	52.302	ENSSMAG00000007429	rnf17	98	51.821	Scophthalmus_maximus
ENSORLG00015013027	-	90	55.556	ENSSDUG00000013530	rnf17	100	55.416	Seriola_dumerili
ENSORLG00015013027	-	90	55.017	ENSSLDG00000019577	rnf17	99	55.862	Seriola_lalandi_dorsalis
ENSORLG00015013027	-	68	34.242	ENSSARG00000003016	RNF17	62	33.636	Sorex_araneus
ENSORLG00015013027	-	87	32.937	ENSSPUG00000008917	RNF17	90	32.444	Sphenodon_punctatus
ENSORLG00015013027	-	88	55.413	ENSSPAG00000001925	rnf17	99	55.128	Stegastes_partitus
ENSORLG00015013027	-	98	31.676	ENSSSCG00000009572	RNF17	97	31.660	Sus_scrofa
ENSORLG00015013027	-	60	32.670	ENSTGUG00000011267	-	99	32.725	Taeniopygia_guttata
ENSORLG00015013027	-	99	45.924	ENSTRUG00000015498	rnf17	99	45.924	Takifugu_rubripes
ENSORLG00015013027	-	75	50.548	ENSTNIG00000015681	rnf17	99	50.295	Tetraodon_nigroviridis
ENSORLG00015013027	-	76	41.423	ENSTBEG00000000282	RNF17	60	35.393	Tupaia_belangeri
ENSORLG00015013027	-	99	33.861	ENSTTRG00000012698	RNF17	95	33.861	Tursiops_truncatus
ENSORLG00015013027	-	56	39.565	ENSUMAG00000013953	-	98	34.586	Ursus_maritimus
ENSORLG00015013027	-	81	40.845	ENSVPAG00000011388	RNF17	76	40.845	Vicugna_pacos
ENSORLG00015013027	-	98	31.122	ENSVVUG00000006226	RNF17	97	31.079	Vulpes_vulpes
ENSORLG00015013027	-	71	30.525	ENSXETG00000034020	RNF17	99	36.715	Xenopus_tropicalis
ENSORLG00015013027	-	90	52.753	ENSXCOG00000018295	rnf17	99	52.962	Xiphophorus_couchianus
ENSORLG00015013027	-	90	54.213	ENSXMAG00000014747	rnf17	99	54.143	Xiphophorus_maculatus