EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015013084 (Gene tree)
Gene ID: -
Gene Symbol: cth1
Alias: -
Full Name: cysteine three histidine 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 1185 bases
Position: chr18:28864984-28866168
Accession: ZDB-GENE-990806-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015012243	zf-CCCH	PF00642.24	4e-28	1	4
ENSORLP00015012243	zf-CCCH	PF00642.24	4e-28	2	4
ENSORLP00015012243	zf-CCCH	PF00642.24	4e-28	3	4
ENSORLP00015012243	zf-CCCH	PF00642.24	4e-28	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015032543	-	1099	-	ENSORLP00015012243	297 (aa)	-	-

Gene Model

Click here to download ENSORLG00015013084's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015013084's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015013084	cth1	89	59.206	ENSAPOG00000012552	cth1	100	58.621	Acanthochromis_polyacanthus
ENSORLG00015013084	cth1	88	60.949	ENSACIG00000016026	cth1	99	56.230	Amphilophus_citrinellus
ENSORLG00015013084	cth1	100	60.256	ENSAOCG00000001644	cth1	100	57.372	Amphiprion_ocellaris
ENSORLG00015013084	cth1	100	60.256	ENSAPEG00000008930	cth1	100	57.372	Amphiprion_percula
ENSORLG00015013084	cth1	99	61.111	ENSATEG00000002281	cth1	97	59.752	Anabas_testudineus
ENSORLG00015013084	cth1	84	58.730	ENSACLG00000015353	cth1	94	58.271	Astatotilapia_calliptera
ENSORLG00015013084	cth1	96	51.887	ENSAMXG00000025717	cth1	99	50.309	Astyanax_mexicanus
ENSORLG00015013084	cth1	100	58.154	ENSCSEG00000014617	cth1	100	59.692	Cynoglossus_semilaevis
ENSORLG00015013084	cth1	100	55.410	ENSCVAG00000001680	cth1	65	55.882	Cyprinodon_variegatus
ENSORLG00015013084	cth1	78	53.846	ENSDARG00000057328	cth1	96	52.229	Danio_rerio
ENSORLG00015013084	cth1	88	51.827	ENSELUG00000012738	cth1	90	53.247	Esox_lucius
ENSORLG00015013084	cth1	100	53.674	ENSFHEG00000022665	cth1	100	52.077	Fundulus_heteroclitus
ENSORLG00015013084	cth1	99	58.033	ENSGMOG00000007360	cth1	100	54.194	Gadus_morhua
ENSORLG00015013084	cth1	100	56.151	ENSGAFG00000019288	cth1	100	52.848	Gambusia_affinis
ENSORLG00015013084	cth1	99	62.583	ENSGACG00000000802	cth1	99	60.133	Gasterosteus_aculeatus
ENSORLG00015013084	cth1	100	57.667	ENSHBUG00000014400	cth1	100	57.000	Haplochromis_burtoni
ENSORLG00015013084	cth1	99	50.167	ENSHCOG00000010276	cth1	99	48.667	Hippocampus_comes
ENSORLG00015013084	cth1	100	53.354	ENSIPUG00000018040	cth1	95	54.019	Ictalurus_punctatus
ENSORLG00015013084	cth1	100	61.716	ENSKMAG00000005944	cth1	100	59.406	Kryptolebias_marmoratus
ENSORLG00015013084	cth1	100	60.938	ENSLBEG00000019253	cth1	100	61.635	Labrus_bergylta
ENSORLG00015013084	cth1	70	52.577	ENSLOCG00000002047	cth1	90	52.577	Lepisosteus_oculatus
ENSORLG00015013084	cth1	88	47.522	ENSMAMG00000001525	cth1	99	55.745	Mastacembelus_armatus
ENSORLG00015013084	cth1	100	57.667	ENSMZEG00005022335	cth1	100	57.096	Maylandia_zebra
ENSORLG00015013084	cth1	94	57.947	ENSMMOG00000020518	cth1	100	57.807	Mola_mola
ENSORLG00015013084	cth1	100	52.139	ENSMALG00000020738	cth1	58	60.455	Monopterus_albus
ENSORLG00015013084	cth1	89	60.150	ENSNBRG00000022789	cth1	80	59.836	Neolamprologus_brichardi
ENSORLG00015013084	cth1	99	58.882	ENSONIG00000021318	cth1	99	58.224	Oreochromis_niloticus
ENSORLG00015013084	cth1	100	98.990	ENSORLG00000022847	cth1	100	98.990	Oryzias_latipes
ENSORLG00015013084	cth1	100	97.980	ENSORLG00020011979	cth1	100	97.980	Oryzias_latipes_hni
ENSORLG00015013084	cth1	100	69.408	ENSOMEG00000005809	cth1	85	71.287	Oryzias_melastigma
ENSORLG00015013084	cth1	86	51.557	ENSPKIG00000015883	cth1	86	50.173	Paramormyrops_kingsleyae
ENSORLG00015013084	cth1	99	56.970	ENSPMGG00000004275	cth1	96	58.842	Periophthalmus_magnuspinnatus
ENSORLG00015013084	cth1	100	59.105	ENSPFOG00000013583	cth1	94	55.911	Poecilia_formosa
ENSORLG00015013084	cth1	100	58.786	ENSPLAG00000018158	cth1	94	55.591	Poecilia_latipinna
ENSORLG00015013084	cth1	100	58.786	ENSPMEG00000005744	cth1	100	56.230	Poecilia_mexicana
ENSORLG00015013084	cth1	99	58.333	ENSPREG00000004099	cth1	100	56.410	Poecilia_reticulata
ENSORLG00015013084	cth1	91	57.875	ENSPNYG00000016705	cth1	93	57.143	Pundamilia_nyererei
ENSORLG00015013084	cth1	89	55.219	ENSPNAG00000013147	cth1	83	51.460	Pygocentrus_nattereri
ENSORLG00015013084	cth1	91	52.013	ENSSFOG00015017190	cth1	80	50.965	Scleropages_formosus
ENSORLG00015013084	cth1	100	59.568	ENSSMAG00000007977	cth1	100	60.870	Scophthalmus_maximus
ENSORLG00015013084	cth1	100	61.934	ENSSDUG00000004321	cth1	100	62.538	Seriola_dumerili
ENSORLG00015013084	cth1	100	60.241	ENSSLDG00000004516	-	100	62.651	Seriola_lalandi_dorsalis
ENSORLG00015013084	cth1	100	60.241	ENSSLDG00000012760	cth1	100	62.651	Seriola_lalandi_dorsalis
ENSORLG00015013084	cth1	99	60.423	ENSSLDG00000010023	-	100	62.840	Seriola_lalandi_dorsalis
ENSORLG00015013084	cth1	100	57.680	ENSSPAG00000018659	cth1	100	57.098	Stegastes_partitus
ENSORLG00015013084	cth1	100	52.812	ENSTRUG00000012770	cth1	100	54.688	Takifugu_rubripes
ENSORLG00015013084	cth1	100	56.563	ENSTNIG00000000740	cth1	100	54.688	Tetraodon_nigroviridis
ENSORLG00015013084	cth1	82	54.508	ENSXCOG00000003710	cth1	81	54.185	Xiphophorus_couchianus
ENSORLG00015013084	cth1	100	56.051	ENSXMAG00000023885	cth1	100	53.503	Xiphophorus_maculatus