EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015013267 (Gene tree)
Gene ID: -
Gene Symbol: polr1d
Alias: -
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 11414 bases
Position: chr10:29569535-29580948
Accession: ZDB-GENE-040930-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015029885	RNA_pol_L_2	PF13656.6	6.4e-30	1	1
ENSORLP00015012415	RNA_pol_L_2	PF13656.6	1.3e-29	1	1
ENSORLP00015029885	RNA_pol_L	PF01193.24	1.3e-12	1	1
ENSORLP00015012415	RNA_pol_L	PF01193.24	2.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015032624	-	696	-	ENSORLP00015012415	209 (aa)	-	-
ENSORLT00015032627	-	2894	-	ENSORLP00015029885	151 (aa)	-	-

Gene Model

Click here to download ENSORLG00015013267's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015013267's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015013267	polr1d	54	32.456	ENSORLG00015003457	polr2j	76	32.456

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015013267	polr1d	75	67.257	ENSG00000186184	POLR1D	92	69.159	Homo_sapiens
ENSORLG00015013267	polr1d	68	81.373	ENSAPOG00000021882	polr1d	100	82.075	Acanthochromis_polyacanthus
ENSORLG00015013267	polr1d	75	67.544	ENSAMEG00000019095	POLR1D	91	67.544	Ailuropoda_melanoleuca
ENSORLG00015013267	polr1d	75	82.609	ENSACIG00000013328	polr1d	100	82.609	Amphilophus_citrinellus
ENSORLG00015013267	polr1d	75	79.825	ENSAOCG00000018500	polr1d	100	79.825	Amphiprion_ocellaris
ENSORLG00015013267	polr1d	75	80.702	ENSAPEG00000009489	polr1d	100	80.702	Amphiprion_percula
ENSORLG00015013267	polr1d	75	81.579	ENSATEG00000019322	polr1d	100	81.579	Anabas_testudineus
ENSORLG00015013267	polr1d	72	68.519	ENSACAG00000015753	POLR1D	93	68.519	Anolis_carolinensis
ENSORLG00015013267	polr1d	75	67.257	ENSANAG00000024486	POLR1D	85	67.257	Aotus_nancymaae
ENSORLG00015013267	polr1d	75	83.333	ENSACLG00000023805	polr1d	100	83.333	Astatotilapia_calliptera
ENSORLG00015013267	polr1d	75	72.566	ENSAMXG00000036118	polr1d	98	72.566	Astyanax_mexicanus
ENSORLG00015013267	polr1d	75	69.912	ENSBTAG00000033252	-	85	69.912	Bos_taurus
ENSORLG00015013267	polr1d	75	69.912	ENSBTAG00000008642	POLR1D	85	69.912	Bos_taurus
ENSORLG00015013267	polr1d	61	37.234	WBGene00010230	rpac-19	65	37.234	Caenorhabditis_elegans
ENSORLG00015013267	polr1d	75	68.142	ENSCJAG00000044669	POLR1D	85	68.142	Callithrix_jacchus
ENSORLG00015013267	polr1d	75	68.142	ENSCAFG00000006755	POLR1D	85	68.142	Canis_familiaris
ENSORLG00015013267	polr1d	75	68.142	ENSCHIG00000021910	POLR1D	85	68.142	Capra_hircus
ENSORLG00015013267	polr1d	75	56.897	ENSTSYG00000034852	-	88	59.813	Carlito_syrichta
ENSORLG00015013267	polr1d	75	67.544	ENSTSYG00000026817	-	86	67.544	Carlito_syrichta
ENSORLG00015013267	polr1d	75	67.257	ENSCCAG00000021349	-	85	67.257	Cebus_capucinus
ENSORLG00015013267	polr1d	75	52.632	ENSCCAG00000020191	-	84	52.632	Cebus_capucinus
ENSORLG00015013267	polr1d	75	67.257	ENSCATG00000030710	-	85	67.257	Cercocebus_atys
ENSORLG00015013267	polr1d	75	57.522	ENSCATG00000022900	-	84	57.522	Cercocebus_atys
ENSORLG00015013267	polr1d	75	68.421	ENSCLAG00000017623	POLR1D	92	68.421	Chinchilla_lanigera
ENSORLG00015013267	polr1d	67	71.287	ENSCPBG00000004719	POLR1D	99	73.000	Chrysemys_picta_bellii
ENSORLG00015013267	polr1d	75	66.372	ENSCANG00000037694	-	85	66.372	Colobus_angolensis_palliatus
ENSORLG00015013267	polr1d	75	67.257	ENSCANG00000028632	-	85	67.257	Colobus_angolensis_palliatus
ENSORLG00015013267	polr1d	75	68.142	ENSCGRG00001021251	Polr1d	85	68.142	Cricetulus_griseus_chok1gshd
ENSORLG00015013267	polr1d	75	68.142	ENSCGRG00000011639	Polr1d	85	68.142	Cricetulus_griseus_crigri
ENSORLG00015013267	polr1d	70	78.302	ENSCSEG00000018268	polr1d	100	74.359	Cynoglossus_semilaevis
ENSORLG00015013267	polr1d	75	85.088	ENSCVAG00000018527	polr1d	100	85.088	Cyprinodon_variegatus
ENSORLG00015013267	polr1d	69	72.115	ENSDARG00000037570	polr1d	93	72.115	Danio_rerio
ENSORLG00015013267	polr1d	77	63.248	ENSDNOG00000046247	-	87	63.248	Dasypus_novemcinctus
ENSORLG00015013267	polr1d	77	64.103	ENSDNOG00000043676	-	88	64.103	Dasypus_novemcinctus
ENSORLG00015013267	polr1d	74	69.369	ENSDORG00000029155	Polr1d	83	69.369	Dipodomys_ordii
ENSORLG00015013267	polr1d	72	42.202	FBgn0086447	l(2)37Cg	80	47.059	Drosophila_melanogaster
ENSORLG00015013267	polr1d	74	69.369	ENSETEG00000012797	POLR1D	90	69.369	Echinops_telfairi
ENSORLG00015013267	polr1d	62	62.366	ENSEBUG00000011748	polr1d	65	62.366	Eptatretus_burgeri
ENSORLG00015013267	polr1d	77	67.241	ENSEASG00005022487	POLR1D	90	67.241	Equus_asinus_asinus
ENSORLG00015013267	polr1d	75	68.142	ENSEEUG00000013144	POLR1D	91	68.142	Erinaceus_europaeus
ENSORLG00015013267	polr1d	74	75.000	ENSELUG00000005105	rpac2	98	75.000	Esox_lucius
ENSORLG00015013267	polr1d	75	68.142	ENSFCAG00000030162	POLR1D	85	68.142	Felis_catus
ENSORLG00015013267	polr1d	66	74.000	ENSFALG00000011463	POLR1D	99	74.000	Ficedula_albicollis
ENSORLG00015013267	polr1d	75	68.142	ENSFDAG00000004463	POLR1D	85	68.142	Fukomys_damarensis
ENSORLG00015013267	polr1d	76	86.087	ENSFHEG00000015410	polr1d	100	86.087	Fundulus_heteroclitus
ENSORLG00015013267	polr1d	75	85.088	ENSGAFG00000001693	polr1d	100	85.088	Gambusia_affinis
ENSORLG00015013267	polr1d	73	80.909	ENSGACG00000018585	polr1d	93	80.909	Gasterosteus_aculeatus
ENSORLG00015013267	polr1d	75	72.807	ENSGAGG00000008503	POLR1D	100	72.807	Gopherus_agassizii
ENSORLG00015013267	polr1d	75	67.257	ENSGGOG00000004235	POLR1D	85	67.257	Gorilla_gorilla
ENSORLG00015013267	polr1d	75	83.333	ENSHBUG00000002111	polr1d	100	83.333	Haplochromis_burtoni
ENSORLG00015013267	polr1d	75	67.257	ENSHGLG00000003202	POLR1D	85	67.257	Heterocephalus_glaber_female
ENSORLG00015013267	polr1d	75	67.257	ENSHGLG00100009393	POLR1D	85	67.257	Heterocephalus_glaber_male
ENSORLG00015013267	polr1d	75	75.439	ENSHCOG00000003258	polr1d	100	75.439	Hippocampus_comes
ENSORLG00015013267	polr1d	75	73.913	ENSIPUG00000014810	polr1d	100	73.913	Ictalurus_punctatus
ENSORLG00015013267	polr1d	75	67.257	ENSSTOG00000013877	POLR1D	85	67.257	Ictidomys_tridecemlineatus
ENSORLG00015013267	polr1d	75	51.754	ENSJJAG00000021667	-	67	51.754	Jaculus_jaculus
ENSORLG00015013267	polr1d	75	66.667	ENSJJAG00000022671	-	93	66.964	Jaculus_jaculus
ENSORLG00015013267	polr1d	75	85.088	ENSKMAG00000015256	polr1d	100	85.088	Kryptolebias_marmoratus
ENSORLG00015013267	polr1d	75	80.702	ENSLBEG00000015919	polr1d	100	80.702	Labrus_bergylta
ENSORLG00015013267	polr1d	75	66.372	ENSLACG00000006810	POLR1D	93	66.372	Latimeria_chalumnae
ENSORLG00015013267	polr1d	73	68.182	ENSLAFG00000032290	POLR1D	83	68.182	Loxodonta_africana
ENSORLG00015013267	polr1d	75	66.667	ENSMFAG00000045264	POLR1D	88	66.667	Macaca_fascicularis
ENSORLG00015013267	polr1d	53	68.750	ENSMMUG00000041570	-	72	68.750	Macaca_mulatta
ENSORLG00015013267	polr1d	71	69.159	ENSMMUG00000020386	POLR1D	92	69.159	Macaca_mulatta
ENSORLG00015013267	polr1d	75	67.257	ENSMNEG00000008630	-	85	67.257	Macaca_nemestrina
ENSORLG00015013267	polr1d	75	53.509	ENSMNEG00000038120	-	84	53.509	Macaca_nemestrina
ENSORLG00015013267	polr1d	75	67.257	ENSMLEG00000041048	-	85	67.257	Mandrillus_leucophaeus
ENSORLG00015013267	polr1d	75	58.407	ENSMLEG00000032251	-	84	58.407	Mandrillus_leucophaeus
ENSORLG00015013267	polr1d	68	82.353	ENSMAMG00000014834	polr1d	93	85.000	Mastacembelus_armatus
ENSORLG00015013267	polr1d	68	82.353	ENSMZEG00005006638	polr1d	91	83.495	Maylandia_zebra
ENSORLG00015013267	polr1d	61	77.174	ENSMGAG00000005322	POLR1D	83	80.000	Meleagris_gallopavo
ENSORLG00015013267	polr1d	75	68.142	ENSMAUG00000001946	Polr1d	85	68.142	Mesocricetus_auratus
ENSORLG00015013267	polr1d	75	67.257	ENSMICG00000016883	-	85	67.257	Microcebus_murinus
ENSORLG00015013267	polr1d	75	53.097	ENSMICG00000007349	-	85	53.097	Microcebus_murinus
ENSORLG00015013267	polr1d	75	67.257	ENSMOCG00000021288	Polr1d	85	67.257	Microtus_ochrogaster
ENSORLG00015013267	polr1d	75	85.088	ENSMMOG00000009605	polr1d	100	85.088	Mola_mola
ENSORLG00015013267	polr1d	75	70.175	ENSMODG00000023881	POLR1D	100	70.175	Monodelphis_domestica
ENSORLG00015013267	polr1d	75	78.070	ENSMALG00000010652	polr1d	100	78.070	Monopterus_albus
ENSORLG00015013267	polr1d	74	67.568	MGP_CAROLIEiJ_G0028034	Polr1d	83	67.568	Mus_caroli
ENSORLG00015013267	polr1d	75	65.789	ENSMUSG00000029642	Polr1d	86	65.789	Mus_musculus
ENSORLG00015013267	polr1d	75	65.789	MGP_PahariEiJ_G0024600	Polr1d	86	65.789	Mus_pahari
ENSORLG00015013267	polr1d	75	64.912	MGP_SPRETEiJ_G0029032	Polr1d	86	64.912	Mus_spretus
ENSORLG00015013267	polr1d	75	64.035	ENSMLUG00000004118	-	86	64.035	Myotis_lucifugus
ENSORLG00015013267	polr1d	75	67.257	ENSMLUG00000027169	-	85	67.257	Myotis_lucifugus
ENSORLG00015013267	polr1d	72	70.370	ENSNGAG00000006014	Polr1d	93	70.370	Nannospalax_galili
ENSORLG00015013267	polr1d	75	83.333	ENSNBRG00000020327	polr1d	100	83.333	Neolamprologus_brichardi
ENSORLG00015013267	polr1d	75	67.257	ENSNLEG00000000358	POLR1D	85	67.257	Nomascus_leucogenys
ENSORLG00015013267	polr1d	75	59.292	ENSODEG00000014801	-	83	59.292	Octodon_degus
ENSORLG00015013267	polr1d	75	69.027	ENSODEG00000005294	-	85	69.027	Octodon_degus
ENSORLG00015013267	polr1d	70	74.528	ENSOANG00000008708	-	98	74.528	Ornithorhynchus_anatinus
ENSORLG00015013267	polr1d	75	66.667	ENSOCUG00000015706	POLR1D	70	66.667	Oryctolagus_cuniculus
ENSORLG00015013267	polr1d	75	99.123	ENSORLG00000010257	polr1d	100	99.123	Oryzias_latipes
ENSORLG00015013267	polr1d	96	88.966	ENSORLG00020000533	polr1d	98	88.966	Oryzias_latipes_hni
ENSORLG00015013267	polr1d	100	82.468	ENSOMEG00000014912	polr1d	100	82.468	Oryzias_melastigma
ENSORLG00015013267	polr1d	75	68.142	ENSOGAG00000014601	POLR1D	85	68.142	Otolemur_garnettii
ENSORLG00015013267	polr1d	75	67.544	ENSOARG00000017005	POLR1D	88	67.544	Ovis_aries
ENSORLG00015013267	polr1d	79	64.706	ENSPPAG00000028138	POLR1D	89	64.706	Pan_paniscus
ENSORLG00015013267	polr1d	75	68.142	ENSPPRG00000003381	POLR1D	85	68.142	Panthera_pardus
ENSORLG00015013267	polr1d	75	67.544	ENSPTIG00000018137	POLR1D	86	67.544	Panthera_tigris_altaica
ENSORLG00015013267	polr1d	75	67.257	ENSPTRG00000005734	POLR1D	85	67.257	Pan_troglodytes
ENSORLG00015013267	polr1d	75	67.257	ENSPANG00000020259	-	85	67.257	Papio_anubis
ENSORLG00015013267	polr1d	75	58.407	ENSPANG00000035051	-	84	58.407	Papio_anubis
ENSORLG00015013267	polr1d	64	77.320	ENSPKIG00000021891	polr1d	98	57.724	Paramormyrops_kingsleyae
ENSORLG00015013267	polr1d	76	70.435	ENSPSIG00000011822	POLR1D	89	70.435	Pelodiscus_sinensis
ENSORLG00015013267	polr1d	77	67.241	ENSPMGG00000012998	POLR1D	85	67.241	Periophthalmus_magnuspinnatus
ENSORLG00015013267	polr1d	76	75.652	ENSPMGG00000010359	polr1d	100	75.652	Periophthalmus_magnuspinnatus
ENSORLG00015013267	polr1d	75	66.667	ENSPEMG00000006336	-	88	66.667	Peromyscus_maniculatus_bairdii
ENSORLG00015013267	polr1d	71	58.333	ENSPMAG00000004228	polr1d	91	58.333	Petromyzon_marinus
ENSORLG00015013267	polr1d	75	69.298	ENSPCIG00000001673	POLR1D	100	69.298	Phascolarctos_cinereus
ENSORLG00015013267	polr1d	75	85.965	ENSPFOG00000023343	polr1d	100	87.356	Poecilia_formosa
ENSORLG00015013267	polr1d	75	85.965	ENSPLAG00000009675	polr1d	100	85.965	Poecilia_latipinna
ENSORLG00015013267	polr1d	75	85.965	ENSPMEG00000004628	polr1d	100	85.965	Poecilia_mexicana
ENSORLG00015013267	polr1d	75	85.965	ENSPREG00000022032	polr1d	100	85.965	Poecilia_reticulata
ENSORLG00015013267	polr1d	75	66.372	ENSPCOG00000028175	POLR1D	85	66.372	Propithecus_coquereli
ENSORLG00015013267	polr1d	75	83.333	ENSPNYG00000000107	polr1d	100	83.333	Pundamilia_nyererei
ENSORLG00015013267	polr1d	72	70.642	ENSPNAG00000001512	polr1d	100	68.067	Pygocentrus_nattereri
ENSORLG00015013267	polr1d	75	67.257	ENSRBIG00000036378	-	85	67.257	Rhinopithecus_bieti
ENSORLG00015013267	polr1d	75	64.602	ENSRBIG00000000336	-	85	64.602	Rhinopithecus_bieti
ENSORLG00015013267	polr1d	75	65.487	ENSRROG00000026751	-	85	65.487	Rhinopithecus_roxellana
ENSORLG00015013267	polr1d	75	67.257	ENSRROG00000042232	-	85	67.257	Rhinopithecus_roxellana
ENSORLG00015013267	polr1d	60	54.444	YNL113W	RPC19	76	50.926	Saccharomyces_cerevisiae
ENSORLG00015013267	polr1d	75	67.257	ENSSBOG00000028482	-	85	67.257	Saimiri_boliviensis_boliviensis
ENSORLG00015013267	polr1d	70	65.094	ENSSBOG00000030146	-	78	65.094	Saimiri_boliviensis_boliviensis
ENSORLG00015013267	polr1d	74	66.964	ENSSHAG00000001190	POLR1D	87	66.964	Sarcophilus_harrisii
ENSORLG00015013267	polr1d	72	76.364	ENSSFOG00015011375	polr1d	96	76.364	Scleropages_formosus
ENSORLG00015013267	polr1d	75	82.456	ENSSMAG00000011861	polr1d	100	82.456	Scophthalmus_maximus
ENSORLG00015013267	polr1d	75	81.579	ENSSDUG00000011930	polr1d	100	81.579	Seriola_dumerili
ENSORLG00015013267	polr1d	70	78.095	ENSSLDG00000023871	polr1d	90	80.189	Seriola_lalandi_dorsalis
ENSORLG00015013267	polr1d	75	68.142	ENSSARG00000007840	POLR1D	85	68.142	Sorex_araneus
ENSORLG00015013267	polr1d	69	75.000	ENSSPUG00000005786	POLR1D	89	75.000	Sphenodon_punctatus
ENSORLG00015013267	polr1d	75	84.211	ENSSPAG00000011764	polr1d	100	84.211	Stegastes_partitus
ENSORLG00015013267	polr1d	74	67.857	ENSSSCG00000009310	POLR1D	84	67.857	Sus_scrofa
ENSORLG00015013267	polr1d	64	73.958	ENSTGUG00000005450	POLR1D	100	73.958	Taeniopygia_guttata
ENSORLG00015013267	polr1d	75	80.702	ENSTRUG00000019741	polr1d	100	80.702	Takifugu_rubripes
ENSORLG00015013267	polr1d	79	64.706	ENSTBEG00000007006	POLR1D	96	64.706	Tupaia_belangeri
ENSORLG00015013267	polr1d	75	68.142	ENSUAMG00000011413	POLR1D	85	68.142	Ursus_americanus
ENSORLG00015013267	polr1d	75	67.544	ENSUMAG00000016968	POLR1D	89	67.544	Ursus_maritimus
ENSORLG00015013267	polr1d	75	68.142	ENSVVUG00000009216	POLR1D	85	68.142	Vulpes_vulpes
ENSORLG00015013267	polr1d	67	88.119	ENSXCOG00000011731	polr1d	99	74.242	Xiphophorus_couchianus
ENSORLG00015013267	polr1d	67	87.129	ENSXMAG00000017538	polr1d	87	81.034	Xiphophorus_maculatus