EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015013408 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: helicase ARIP4
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 55277 bases
Position: chr7:6802882-6858158
Accession: 101167365
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015029924	ResIII	PF04851.15	7.7e-08	1	1
ENSORLP00015029910	ResIII	PF04851.15	8.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015019617	-	7161	XM_023956419	ENSORLP00015029924	1495 (aa)	XP_023812187	-
ENSORLT00015019597	-	6998	XM_023956421	ENSORLP00015029910	1474 (aa)	XP_023812189	-

Gene Model

Click here to download ENSORLG00015013408's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015013408's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015013408	-	97	60.149	ENSORLG00015021530	rad54l2	95	59.242

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015013408	-	91	59.190	ENSG00000164080	RAD54L2	94	59.297	Homo_sapiens
ENSORLG00015013408	-	99	78.504	ENSAPOG00000024141	-	99	78.786	Acanthochromis_polyacanthus
ENSORLG00015013408	-	93	57.869	ENSAMEG00000009326	RAD54L2	90	58.713	Ailuropoda_melanoleuca
ENSORLG00015013408	-	92	75.436	ENSACIG00000015932	-	100	74.874	Amphilophus_citrinellus
ENSORLG00015013408	-	85	63.587	ENSACIG00000018079	rad54l2	94	61.493	Amphilophus_citrinellus
ENSORLG00015013408	-	99	78.340	ENSAOCG00000022380	-	99	77.860	Amphiprion_ocellaris
ENSORLG00015013408	-	99	77.227	ENSATEG00000006641	-	99	77.529	Anabas_testudineus
ENSORLG00015013408	-	97	60.934	ENSATEG00000009346	rad54l2	95	60.997	Anabas_testudineus
ENSORLG00015013408	-	94	60.655	ENSAPLG00000002121	RAD54L2	92	62.044	Anas_platyrhynchos
ENSORLG00015013408	-	74	71.109	ENSACAG00000015883	RAD54L2	87	67.426	Anolis_carolinensis
ENSORLG00015013408	-	91	58.768	ENSANAG00000025396	RAD54L2	90	58.418	Aotus_nancymaae
ENSORLG00015013408	-	97	59.532	ENSACLG00000019111	rad54l2	94	60.095	Astatotilapia_calliptera
ENSORLG00015013408	-	99	77.011	ENSACLG00000018296	-	99	77.145	Astatotilapia_calliptera
ENSORLG00015013408	-	94	60.839	ENSAMXG00000013807	rad54l2	88	61.898	Astyanax_mexicanus
ENSORLG00015013408	-	91	59.012	ENSBTAG00000032253	RAD54L2	91	58.713	Bos_taurus
ENSORLG00015013408	-	91	59.130	ENSCJAG00000005575	RAD54L2	87	62.957	Callithrix_jacchus
ENSORLG00015013408	-	91	58.858	ENSCAFG00000010120	RAD54L2	90	58.568	Canis_familiaris
ENSORLG00015013408	-	91	58.858	ENSCAFG00020022320	RAD54L2	90	58.568	Canis_lupus_dingo
ENSORLG00015013408	-	94	56.094	ENSCHIG00000008830	RAD54L2	91	56.908	Capra_hircus
ENSORLG00015013408	-	91	58.666	ENSTSYG00000013200	RAD54L2	90	58.285	Carlito_syrichta
ENSORLG00015013408	-	81	64.423	ENSCAPG00000016465	RAD54L2	86	61.384	Cavia_aperea
ENSORLG00015013408	-	93	58.292	ENSCPOG00000005941	RAD54L2	90	58.616	Cavia_porcellus
ENSORLG00015013408	-	79	58.326	ENSCCAG00000024465	RAD54L2	89	58.097	Cebus_capucinus
ENSORLG00015013408	-	91	58.943	ENSCATG00000039891	RAD54L2	91	58.581	Cercocebus_atys
ENSORLG00015013408	-	93	57.898	ENSCLAG00000008059	RAD54L2	90	57.775	Chinchilla_lanigera
ENSORLG00015013408	-	91	58.904	ENSCSAG00000014027	RAD54L2	90	58.586	Chlorocebus_sabaeus
ENSORLG00015013408	-	97	59.933	ENSCPBG00000016624	RAD54L2	96	60.646	Chrysemys_picta_bellii
ENSORLG00015013408	-	69	50.960	ENSCING00000009208	-	95	51.134	Ciona_intestinalis
ENSORLG00015013408	-	91	58.973	ENSCANG00000036093	RAD54L2	91	58.256	Colobus_angolensis_palliatus
ENSORLG00015013408	-	90	58.688	ENSCGRG00000007921	Rad54l2	90	58.345	Cricetulus_griseus_crigri
ENSORLG00015013408	-	86	76.157	ENSCSEG00000006115	-	100	75.019	Cynoglossus_semilaevis
ENSORLG00015013408	-	97	58.054	ENSCSEG00000001740	rad54l2	92	58.745	Cynoglossus_semilaevis
ENSORLG00015013408	-	95	61.295	ENSCVAG00000017887	rad54l2	94	59.595	Cyprinodon_variegatus
ENSORLG00015013408	-	96	77.358	ENSCVAG00000005376	-	96	76.643	Cyprinodon_variegatus
ENSORLG00015013408	-	90	63.650	ENSDARG00000063031	rad54l2	95	62.383	Danio_rerio
ENSORLG00015013408	-	93	58.233	ENSDNOG00000017359	RAD54L2	93	57.868	Dasypus_novemcinctus
ENSORLG00015013408	-	85	67.062	ENSDORG00000000651	Rad54l2	89	67.990	Dipodomys_ordii
ENSORLG00015013408	-	58	59.434	FBgn0034976	CG4049	60	51.131	Drosophila_melanogaster
ENSORLG00015013408	-	89	58.272	ENSETEG00000013290	RAD54L2	96	57.706	Echinops_telfairi
ENSORLG00015013408	-	70	57.763	ENSEBUG00000001591	rad54l2	74	61.191	Eptatretus_burgeri
ENSORLG00015013408	-	91	58.828	ENSEASG00005012868	RAD54L2	90	58.412	Equus_asinus_asinus
ENSORLG00015013408	-	91	58.538	ENSECAG00000014759	RAD54L2	90	58.412	Equus_caballus
ENSORLG00015013408	-	79	65.854	ENSEEUG00000001759	RAD54L2	83	66.038	Erinaceus_europaeus
ENSORLG00015013408	-	97	67.015	ENSELUG00000011246	RAD54L2	97	66.667	Esox_lucius
ENSORLG00015013408	-	93	58.163	ENSFCAG00000018563	RAD54L2	90	58.442	Felis_catus
ENSORLG00015013408	-	81	66.667	ENSFALG00000008938	RAD54L2	88	67.512	Ficedula_albicollis
ENSORLG00015013408	-	93	58.322	ENSFDAG00000017084	RAD54L2	90	58.544	Fukomys_damarensis
ENSORLG00015013408	-	94	61.261	ENSFHEG00000023241	rad54l2	94	59.862	Fundulus_heteroclitus
ENSORLG00015013408	-	99	77.568	ENSFHEG00000017845	-	98	77.207	Fundulus_heteroclitus
ENSORLG00015013408	-	90	63.360	ENSGMOG00000010674	rad54l2	90	66.263	Gadus_morhua
ENSORLG00015013408	-	94	60.615	ENSGALG00000003243	RAD54L2	97	58.088	Gallus_gallus
ENSORLG00015013408	-	94	61.867	ENSGAFG00000021535	rad54l2	95	60.041	Gambusia_affinis
ENSORLG00015013408	-	99	76.696	ENSGAFG00000002396	-	99	76.728	Gambusia_affinis
ENSORLG00015013408	-	87	74.690	ENSGACG00000005642	-	99	74.379	Gasterosteus_aculeatus
ENSORLG00015013408	-	94	60.795	ENSGACG00000001558	rad54l2	96	61.765	Gasterosteus_aculeatus
ENSORLG00015013408	-	92	61.506	ENSGAGG00000020971	RAD54L2	93	61.119	Gopherus_agassizii
ENSORLG00015013408	-	91	59.190	ENSGGOG00000010032	RAD54L2	91	58.071	Gorilla_gorilla
ENSORLG00015013408	-	99	77.212	ENSHBUG00000018930	-	99	77.413	Haplochromis_burtoni
ENSORLG00015013408	-	97	59.732	ENSHBUG00000012480	rad54l2	94	60.424	Haplochromis_burtoni
ENSORLG00015013408	-	93	58.251	ENSHGLG00000012116	RAD54L2	90	58.544	Heterocephalus_glaber_female
ENSORLG00015013408	-	93	58.251	ENSHGLG00100007205	RAD54L2	90	58.544	Heterocephalus_glaber_male
ENSORLG00015013408	-	97	58.456	ENSHCOG00000007601	rad54l2	93	58.435	Hippocampus_comes
ENSORLG00015013408	-	99	68.982	ENSHCOG00000006741	-	99	69.378	Hippocampus_comes
ENSORLG00015013408	-	95	57.593	ENSIPUG00000024973	-	95	58.553	Ictalurus_punctatus
ENSORLG00015013408	-	94	59.857	ENSIPUG00000019664	rad54l2	94	57.538	Ictalurus_punctatus
ENSORLG00015013408	-	91	59.134	ENSSTOG00000010014	RAD54L2	90	58.501	Ictidomys_tridecemlineatus
ENSORLG00015013408	-	93	57.935	ENSJJAG00000014332	Rad54l2	90	58.381	Jaculus_jaculus
ENSORLG00015013408	-	99	79.727	ENSKMAG00000002931	-	98	79.740	Kryptolebias_marmoratus
ENSORLG00015013408	-	97	59.398	ENSKMAG00000001976	rad54l2	94	61.152	Kryptolebias_marmoratus
ENSORLG00015013408	-	94	61.240	ENSLBEG00000018779	rad54l2	94	60.487	Labrus_bergylta
ENSORLG00015013408	-	85	74.803	ENSLBEG00000008534	-	98	74.961	Labrus_bergylta
ENSORLG00015013408	-	95	56.537	ENSLACG00000016004	RAD54L2	96	56.528	Latimeria_chalumnae
ENSORLG00015013408	-	72	71.642	ENSLOCG00000014222	rad54l2	99	70.962	Lepisosteus_oculatus
ENSORLG00015013408	-	91	59.176	ENSLAFG00000005966	RAD54L2	90	58.184	Loxodonta_africana
ENSORLG00015013408	-	91	58.904	ENSMFAG00000041836	RAD54L2	91	58.586	Macaca_fascicularis
ENSORLG00015013408	-	91	58.947	ENSMMUG00000012002	RAD54L2	90	58.628	Macaca_mulatta
ENSORLG00015013408	-	91	58.904	ENSMNEG00000035063	RAD54L2	92	58.586	Macaca_nemestrina
ENSORLG00015013408	-	91	58.904	ENSMLEG00000034668	RAD54L2	91	58.586	Mandrillus_leucophaeus
ENSORLG00015013408	-	99	76.057	ENSMAMG00000015321	-	100	75.472	Mastacembelus_armatus
ENSORLG00015013408	-	91	67.921	ENSMAMG00000023761	rad54l2	94	66.723	Mastacembelus_armatus
ENSORLG00015013408	-	99	77.011	ENSMZEG00005021308	-	99	77.145	Maylandia_zebra
ENSORLG00015013408	-	97	59.639	ENSMZEG00005012584	rad54l2	96	59.473	Maylandia_zebra
ENSORLG00015013408	-	94	61.247	ENSMGAG00000002911	RAD54L2	89	62.142	Meleagris_gallopavo
ENSORLG00015013408	-	71	66.822	ENSMAUG00000011651	Rad54l2	91	68.635	Mesocricetus_auratus
ENSORLG00015013408	-	98	56.155	ENSMICG00000002777	RAD54L2	90	57.846	Microcebus_murinus
ENSORLG00015013408	-	94	57.133	ENSMOCG00000022448	Rad54l2	91	58.280	Microtus_ochrogaster
ENSORLG00015013408	-	93	60.227	ENSMMOG00000021709	rad54l2	92	61.033	Mola_mola
ENSORLG00015013408	-	94	73.605	ENSMMOG00000016901	-	98	73.657	Mola_mola
ENSORLG00015013408	-	90	61.733	ENSMODG00000011850	RAD54L2	95	61.511	Monodelphis_domestica
ENSORLG00015013408	-	87	75.328	ENSMALG00000015084	-	97	82.242	Monopterus_albus
ENSORLG00015013408	-	95	56.918	MGP_CAROLIEiJ_G0032634	Rad54l2	90	58.708	Mus_caroli
ENSORLG00015013408	-	95	56.918	ENSMUSG00000040661	Rad54l2	90	58.781	Mus_musculus
ENSORLG00015013408	-	95	56.712	MGP_PahariEiJ_G0015502	Rad54l2	90	58.491	Mus_pahari
ENSORLG00015013408	-	95	56.849	MGP_SPRETEiJ_G0033779	Rad54l2	90	58.636	Mus_spretus
ENSORLG00015013408	-	93	58.021	ENSMPUG00000011865	RAD54L2	90	58.424	Mustela_putorius_furo
ENSORLG00015013408	-	91	59.074	ENSMLUG00000004605	RAD54L2	90	58.713	Myotis_lucifugus
ENSORLG00015013408	-	93	57.976	ENSNGAG00000015629	Rad54l2	90	58.423	Nannospalax_galili
ENSORLG00015013408	-	85	64.113	ENSNBRG00000001937	rad54l2	87	64.585	Neolamprologus_brichardi
ENSORLG00015013408	-	99	77.212	ENSNBRG00000022847	-	99	77.212	Neolamprologus_brichardi
ENSORLG00015013408	-	91	59.190	ENSNLEG00000007038	RAD54L2	92	58.071	Nomascus_leucogenys
ENSORLG00015013408	-	90	71.533	ENSMEUG00000009835	RAD54L2	91	71.985	Notamacropus_eugenii
ENSORLG00015013408	-	93	58.251	ENSODEG00000018266	RAD54L2	90	57.906	Octodon_degus
ENSORLG00015013408	-	96	77.133	ENSONIG00000001663	-	98	77.483	Oreochromis_niloticus
ENSORLG00015013408	-	97	60.989	ENSONIG00000014468	rad54l2	95	60.300	Oreochromis_niloticus
ENSORLG00015013408	-	94	61.138	ENSOANG00000012793	RAD54L2	92	61.560	Ornithorhynchus_anatinus
ENSORLG00015013408	-	94	57.873	ENSOCUG00000017577	RAD54L2	90	58.738	Oryctolagus_cuniculus
ENSORLG00015013408	-	96	60.069	ENSORLG00000002276	rad54l2	95	59.100	Oryzias_latipes
ENSORLG00015013408	-	100	98.576	ENSORLG00000002714	-	100	98.576	Oryzias_latipes
ENSORLG00015013408	-	97	60.136	ENSORLG00020003470	rad54l2	96	59.227	Oryzias_latipes_hni
ENSORLG00015013408	-	100	98.576	ENSORLG00020019256	-	100	98.576	Oryzias_latipes_hni
ENSORLG00015013408	-	100	88.415	ENSOMEG00000008216	-	100	88.550	Oryzias_melastigma
ENSORLG00015013408	-	96	60.360	ENSOMEG00000005597	rad54l2	89	61.999	Oryzias_melastigma
ENSORLG00015013408	-	74	61.388	ENSOGAG00000012442	RAD54L2	94	59.843	Otolemur_garnettii
ENSORLG00015013408	-	91	58.781	ENSOARG00000007264	RAD54L2	90	57.993	Ovis_aries
ENSORLG00015013408	-	91	59.190	ENSPPAG00000038472	RAD54L2	91	58.071	Pan_paniscus
ENSORLG00015013408	-	93	58.163	ENSPPRG00000010212	RAD54L2	90	58.442	Panthera_pardus
ENSORLG00015013408	-	91	58.858	ENSPTIG00000002240	RAD54L2	90	58.442	Panthera_tigris_altaica
ENSORLG00015013408	-	91	59.190	ENSPTRG00000014974	RAD54L2	91	58.071	Pan_troglodytes
ENSORLG00015013408	-	91	58.904	ENSPANG00000000857	RAD54L2	91	58.586	Papio_anubis
ENSORLG00015013408	-	96	65.573	ENSPKIG00000001065	rad54l2	97	65.111	Paramormyrops_kingsleyae
ENSORLG00015013408	-	69	70.605	ENSPSIG00000014346	RAD54L2	96	68.037	Pelodiscus_sinensis
ENSORLG00015013408	-	94	66.785	ENSPMGG00000000641	-	97	66.076	Periophthalmus_magnuspinnatus
ENSORLG00015013408	-	81	62.747	ENSPMGG00000002208	rad54l2	96	62.357	Periophthalmus_magnuspinnatus
ENSORLG00015013408	-	93	57.554	ENSPEMG00000012051	Rad54l2	90	57.993	Peromyscus_maniculatus_bairdii
ENSORLG00015013408	-	89	61.259	ENSPCIG00000018143	RAD54L2	94	62.260	Phascolarctos_cinereus
ENSORLG00015013408	-	94	62.013	ENSPFOG00000018644	rad54l2	95	59.959	Poecilia_formosa
ENSORLG00015013408	-	99	77.229	ENSPFOG00000000197	-	99	77.397	Poecilia_formosa
ENSORLG00015013408	-	99	77.245	ENSPLAG00000013908	-	99	76.828	Poecilia_latipinna
ENSORLG00015013408	-	94	61.451	ENSPLAG00000006015	rad54l2	95	59.644	Poecilia_latipinna
ENSORLG00015013408	-	99	76.818	ENSPMEG00000009878	-	99	76.986	Poecilia_mexicana
ENSORLG00015013408	-	94	62.155	ENSPMEG00000021535	rad54l2	95	60.232	Poecilia_mexicana
ENSORLG00015013408	-	99	77.092	ENSPREG00000013377	RAD54L2	98	77.226	Poecilia_reticulata
ENSORLG00015013408	-	93	61.714	ENSPREG00000008628	rad54l2	97	62.454	Poecilia_reticulata
ENSORLG00015013408	-	91	59.262	ENSPPYG00000013831	RAD54L2	93	58.143	Pongo_abelii
ENSORLG00015013408	-	74	61.479	ENSPCAG00000011952	RAD54L2	80	61.479	Procavia_capensis
ENSORLG00015013408	-	97	57.346	ENSPCOG00000015983	RAD54L2	90	58.824	Propithecus_coquereli
ENSORLG00015013408	-	99	77.078	ENSPNYG00000011435	-	99	77.212	Pundamilia_nyererei
ENSORLG00015013408	-	84	63.953	ENSPNYG00000020693	rad54l2	88	64.332	Pundamilia_nyererei
ENSORLG00015013408	-	94	61.538	ENSPNAG00000006451	rad54l2	91	62.013	Pygocentrus_nattereri
ENSORLG00015013408	-	99	62.769	ENSPNAG00000011583	-	97	63.529	Pygocentrus_nattereri
ENSORLG00015013408	-	69	65.777	ENSRNOG00000049489	LOC102552166	91	67.592	Rattus_norvegicus
ENSORLG00015013408	-	93	55.056	ENSRNOG00000013570	Rad54l2	90	55.748	Rattus_norvegicus
ENSORLG00015013408	-	91	59.045	ENSRBIG00000032434	RAD54L2	93	57.744	Rhinopithecus_bieti
ENSORLG00015013408	-	91	59.045	ENSRROG00000042309	RAD54L2	92	58.327	Rhinopithecus_roxellana
ENSORLG00015013408	-	93	58.110	ENSSBOG00000002139	RAD54L2	90	58.708	Saimiri_boliviensis_boliviensis
ENSORLG00015013408	-	94	60.069	ENSSHAG00000008604	RAD54L2	92	60.895	Sarcophilus_harrisii
ENSORLG00015013408	-	99	65.909	ENSSFOG00015019014	rad54l2	97	66.597	Scleropages_formosus
ENSORLG00015013408	-	98	74.031	ENSSMAG00000009978	-	98	73.928	Scophthalmus_maximus
ENSORLG00015013408	-	94	60.014	ENSSMAG00000020933	rad54l2	94	58.652	Scophthalmus_maximus
ENSORLG00015013408	-	99	77.151	ENSSDUG00000016711	-	99	77.536	Seriola_dumerili
ENSORLG00015013408	-	97	59.560	ENSSDUG00000014268	rad54l2	90	64.015	Seriola_dumerili
ENSORLG00015013408	-	94	61.224	ENSSLDG00000023959	rad54l2	97	62.729	Seriola_lalandi_dorsalis
ENSORLG00015013408	-	96	75.140	ENSSLDG00000023388	-	98	75.461	Seriola_lalandi_dorsalis
ENSORLG00015013408	-	97	60.453	ENSSPAG00000016532	rad54l2	95	60.598	Stegastes_partitus
ENSORLG00015013408	-	93	77.955	ENSSPAG00000006371	-	98	78.261	Stegastes_partitus
ENSORLG00015013408	-	94	57.727	ENSSSCG00000011425	RAD54L2	88	59.276	Sus_scrofa
ENSORLG00015013408	-	94	60.848	ENSTGUG00000004888	RAD54L2	89	62.527	Taeniopygia_guttata
ENSORLG00015013408	-	99	70.822	ENSTRUG00000011066	-	98	70.941	Takifugu_rubripes
ENSORLG00015013408	-	94	60.296	ENSTRUG00000013962	rad54l2	94	59.138	Takifugu_rubripes
ENSORLG00015013408	-	74	69.399	ENSTNIG00000014694	rad54l2	99	66.869	Tetraodon_nigroviridis
ENSORLG00015013408	-	75	75.603	ENSTNIG00000006049	-	100	75.918	Tetraodon_nigroviridis
ENSORLG00015013408	-	85	58.691	ENSTBEG00000003377	RAD54L2	95	58.295	Tupaia_belangeri
ENSORLG00015013408	-	93	57.936	ENSUAMG00000020891	RAD54L2	93	57.964	Ursus_americanus
ENSORLG00015013408	-	93	57.809	ENSUMAG00000021678	RAD54L2	90	58.653	Ursus_maritimus
ENSORLG00015013408	-	91	58.858	ENSVVUG00000026874	RAD54L2	93	58.568	Vulpes_vulpes
ENSORLG00015013408	-	94	60.311	ENSXETG00000000070	rad54l2	87	64.009	Xenopus_tropicalis
ENSORLG00015013408	-	93	73.504	ENSXCOG00000002848	-	96	73.592	Xiphophorus_couchianus
ENSORLG00015013408	-	93	57.306	ENSXCOG00000004961	rad54l2	86	61.028	Xiphophorus_couchianus
ENSORLG00015013408	-	99	76.971	ENSXMAG00000019370	-	99	77.329	Xiphophorus_maculatus
ENSORLG00015013408	-	94	61.769	ENSXMAG00000017182	rad54l2	97	62.546	Xiphophorus_maculatus