EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015013564 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-37
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 35755 bases
Position: chr19:23827965-23863719
Accession: 101171615
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015012712	MMR_HSR1	PF01926.23	3.7e-05	1	1
ENSORLP00015012660	MMR_HSR1	PF01926.23	5.7e-05	1	1
ENSORLP00015012697	MMR_HSR1	PF01926.23	6.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015019913	-	3308	-	ENSORLP00015012712	198 (aa)	-	-
ENSORLT00015032729	-	630	-	ENSORLP00015012660	209 (aa)	-	-
ENSORLT00015019893	-	3507	-	ENSORLP00015012697	244 (aa)	XP_023805388	UPI0009DA1EB1

Gene Model

Click here to download ENSORLG00015013564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015013564's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015013564	-	82	43.210	ENSORLG00015000618	-	81	43.293
ENSORLG00015013564	-	84	42.857	ENSORLG00015007182	rab18b	80	42.690
ENSORLG00015013564	-	95	40.104	ENSORLG00015006162	rab6a	94	39.796
ENSORLG00015013564	-	86	32.749	ENSORLG00015001298	rhebl1	97	32.432
ENSORLG00015013564	-	84	34.337	ENSORLG00015004033	rab23	76	34.807
ENSORLG00015013564	-	96	31.068	ENSORLG00015014829	rab34a	77	31.884
ENSORLG00015013564	-	82	45.062	ENSORLG00015010098	zgc:171927	77	45.122
ENSORLG00015013564	-	96	39.604	ENSORLG00015019591	rab11al	93	40.099
ENSORLG00015013564	-	80	43.396	ENSORLG00015010161	RAB41	77	41.104
ENSORLG00015013564	-	95	41.146	ENSORLG00015012854	rab5aa	97	40.476
ENSORLG00015013564	-	96	39.801	ENSORLG00015010257	rab11a	93	40.299
ENSORLG00015013564	-	97	31.122	ENSORLG00015014268	rabl2	83	30.603
ENSORLG00015013564	-	90	33.889	ENSORLG00015010289	rras	97	34.010
ENSORLG00015013564	-	94	35.897	ENSORLG00015015121	si:dkey-13a21.4	96	36.000
ENSORLG00015013564	-	87	32.584	ENSORLG00015006780	-	93	32.584
ENSORLG00015013564	-	85	43.529	ENSORLG00015004739	rab18a	94	40.609
ENSORLG00015013564	-	59	30.000	ENSORLG00015017615	arl8ba	65	30.000
ENSORLG00015013564	-	81	42.331	ENSORLG00015004273	rab42a	74	42.331
ENSORLG00015013564	-	96	36.410	ENSORLG00015019569	rab25b	98	36.788
ENSORLG00015013564	-	89	42.938	ENSORLG00015016946	rab11ba	66	43.503
ENSORLG00015013564	-	94	42.246	ENSORLG00015015518	-	94	42.328
ENSORLG00015013564	-	85	42.941	ENSORLG00015006970	rab6ba	83	42.529
ENSORLG00015013564	-	89	42.373	ENSORLG00015016999	RAB11B	80	42.938
ENSORLG00015013564	-	81	44.099	ENSORLG00015017737	rab5ab	81	43.503
ENSORLG00015013564	-	81	32.934	ENSORLG00015020441	-	83	34.503
ENSORLG00015013564	-	81	45.963	ENSORLG00015000893	-	80	45.087
ENSORLG00015013564	-	81	40.698	ENSORLG00015004265	rab9b	78	41.279
ENSORLG00015013564	-	82	30.939	ENSORLG00015020495	rasl11a	69	30.939
ENSORLG00015013564	-	80	43.396	ENSORLG00015013638	rab15	75	42.857
ENSORLG00015013564	-	80	44.720	ENSORLG00015022289	-	77	43.636
ENSORLG00015013564	-	96	33.663	ENSORLG00015000584	rab34b	86	30.705
ENSORLG00015013564	-	81	30.220	ENSORLG00015004486	rasl10a	87	30.220
ENSORLG00015013564	-	83	33.529	ENSORLG00015002284	rerg	86	32.955
ENSORLG00015013564	-	96	38.071	ENSORLG00015006820	-	95	39.086
ENSORLG00015013564	-	80	43.478	ENSORLG00015003202	RAB39B	77	42.424
ENSORLG00015013564	-	81	40.373	ENSORLG00015004377	RAB15	78	39.877
ENSORLG00015013564	-	75	38.710	ENSORLG00015013453	-	64	39.355
ENSORLG00015013564	-	85	47.170	ENSORLG00015002344	-	84	40.230
ENSORLG00015013564	-	59	30.769	ENSORLG00015018436	arl8bb	65	31.250
ENSORLG00015013564	-	82	47.531	ENSORLG00015020900	rab2a	77	47.561
ENSORLG00015013564	-	82	45.399	ENSORLG00015010042	rab35b	96	41.026
ENSORLG00015013564	-	83	40.437	ENSORLG00015007869	rab12	75	40.984
ENSORLG00015013564	-	81	45.342	ENSORLG00015006881	rab14	80	45.087
ENSORLG00015013564	-	77	46.053	ENSORLG00015014594	rab3db	76	43.678
ENSORLG00015013564	-	95	34.171	ENSORLG00015015327	rab33a	70	34.673
ENSORLG00015013564	-	81	42.945	ENSORLG00015000142	si:dkey-34d22.5	76	41.916
ENSORLG00015013564	-	80	44.025	ENSORLG00015013537	rab6bb	78	43.558
ENSORLG00015013564	-	85	48.214	ENSORLG00015020972	rab30	82	48.810
ENSORLG00015013564	-	83	43.030	ENSORLG00015021900	rab5c	80	42.614
ENSORLG00015013564	-	77	33.333	ENSORLG00015011467	kras	95	31.383
ENSORLG00015013564	-	88	37.949	ENSORLG00015012872	rab33ba	82	37.949
ENSORLG00015013564	-	96	37.879	ENSORLG00015012725	rab25a	65	38.384
ENSORLG00015013564	-	81	44.099	ENSORLG00015020173	rab11bb	73	44.720
ENSORLG00015013564	-	75	35.714	ENSORLG00015002191	rheb	80	35.714
ENSORLG00015013564	-	96	35.385	ENSORLG00015016047	zgc:101559	83	35.897
ENSORLG00015013564	-	95	38.462	ENSORLG00015010986	rab1ab	100	36.715
ENSORLG00015013564	-	77	34.641	ENSORLG00015003353	zgc:55558	88	36.145

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015013564	-	97	81.865	ENSG00000172794	RAB37	93	85.799	Homo_sapiens
ENSORLG00015013564	-	97	84.456	ENSACIG00000023222	-	84	84.456	Amphilophus_citrinellus
ENSORLG00015013564	-	97	81.250	ENSCPOG00000025645	RAB37	94	79.310	Cavia_porcellus
ENSORLG00015013564	-	97	81.771	ENSCLAG00000008913	RAB37	94	80.198	Chinchilla_lanigera
ENSORLG00015013564	-	97	91.710	ENSCVAG00000014416	-	92	91.710	Cyprinodon_variegatus
ENSORLG00015013564	-	96	80.729	ENSELUG00000023120	-	91	80.729	Esox_lucius
ENSORLG00015013564	-	97	82.292	ENSFDAG00000015285	RAB37	94	80.693	Fukomys_damarensis
ENSORLG00015013564	-	99	89.286	ENSGAFG00000014730	-	97	89.286	Gambusia_affinis
ENSORLG00015013564	-	97	81.771	ENSHGLG00000004384	RAB37	94	80.198	Heterocephalus_glaber_female
ENSORLG00015013564	-	97	81.771	ENSHGLG00100012557	-	94	80.198	Heterocephalus_glaber_male
ENSORLG00015013564	-	99	89.447	ENSLBEG00000027539	-	94	87.379	Labrus_bergylta
ENSORLG00015013564	-	80	96.203	ENSMAMG00000020286	-	76	96.203	Mastacembelus_armatus
ENSORLG00015013564	-	97	82.292	MGP_CAROLIEiJ_G0017386	Rab37	94	80.198	Mus_caroli
ENSORLG00015013564	-	97	82.292	ENSMUSG00000020732	Rab37	94	80.198	Mus_musculus
ENSORLG00015013564	-	97	82.292	MGP_PahariEiJ_G0018517	Rab37	94	80.198	Mus_pahari
ENSORLG00015013564	-	97	82.292	MGP_SPRETEiJ_G0018231	Rab37	94	80.198	Mus_spretus
ENSORLG00015013564	-	97	72.589	ENSNBRG00000011872	-	92	72.589	Neolamprologus_brichardi
ENSORLG00015013564	-	100	100.000	ENSORLG00000024558	-	100	100.000	Oryzias_latipes
ENSORLG00015013564	-	100	100.000	ENSORLG00020015717	-	100	100.000	Oryzias_latipes_hni
ENSORLG00015013564	-	100	98.770	ENSOMEG00000018494	-	100	98.770	Oryzias_melastigma
ENSORLG00015013564	-	97	81.347	ENSPCIG00000004450	-	92	81.592	Phascolarctos_cinereus
ENSORLG00015013564	-	100	90.164	ENSPFOG00000006314	-	100	90.164	Poecilia_formosa
ENSORLG00015013564	-	100	90.164	ENSPFOG00000019144	-	100	90.164	Poecilia_formosa
ENSORLG00015013564	-	100	89.754	ENSPMEG00000017161	-	100	89.754	Poecilia_mexicana
ENSORLG00015013564	-	100	89.754	ENSPMEG00000002564	-	100	89.754	Poecilia_mexicana
ENSORLG00015013564	-	97	70.312	ENSPPYG00000008601	-	93	69.307	Pongo_abelii
ENSORLG00015013564	-	97	81.250	ENSPNAG00000021675	-	93	81.407	Pygocentrus_nattereri
ENSORLG00015013564	-	100	87.705	ENSXMAG00000021303	-	100	87.705	Xiphophorus_maculatus