EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015013678 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.1
Alias: -
Full Name: RNA binding motif protein 4.1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 4945 bases
Position: chr18:28683483-28688427
Accession: ZDB-GENE-030131-3902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015012827	zf-CCHC	PF00098.23	5.5e-08	1	1
ENSORLP00015012827	RRM_1	PF00076.22	1.7e-29	1	2
ENSORLP00015012827	RRM_1	PF00076.22	1.7e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015020036	-	3138	-	ENSORLP00015012827	417 (aa)	-	-

Gene Model

Click here to download ENSORLG00015013678's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015013678's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015013678	rbm4.1	57	52.349	ENSORLG00015013698	rbm4.3	77	51.656
ENSORLG00015013678	rbm4.1	57	52.703	ENSORLG00015013686	rbm4.3	77	53.020
ENSORLG00015013678	rbm4.1	61	52.288	ENSORLG00015013721	rbm4.3	89	52.597

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015013678	rbm4.1	100	79.810	ENSAPOG00000012353	rbm4.1	100	79.621	Acanthochromis_polyacanthus
ENSORLG00015013678	rbm4.1	100	79.097	ENSACIG00000016482	rbm4.1	100	79.097	Amphilophus_citrinellus
ENSORLG00015013678	rbm4.1	100	80.285	ENSAOCG00000010915	rbm4.1	100	79.762	Amphiprion_ocellaris
ENSORLG00015013678	rbm4.1	100	80.285	ENSAPEG00000009494	rbm4.1	100	79.762	Amphiprion_percula
ENSORLG00015013678	rbm4.1	100	78.385	ENSATEG00000001904	rbm4.1	100	78.385	Anabas_testudineus
ENSORLG00015013678	rbm4.1	99	47.847	ENSACLG00000007740	-	99	46.890	Astatotilapia_calliptera
ENSORLG00015013678	rbm4.1	100	79.097	ENSACLG00000007722	rbm4.1	100	79.097	Astatotilapia_calliptera
ENSORLG00015013678	rbm4.1	100	61.098	ENSAMXG00000036611	rbm4.1	100	60.664	Astyanax_mexicanus
ENSORLG00015013678	rbm4.1	95	48.628	ENSCSEG00000014359	-	95	48.649	Cynoglossus_semilaevis
ENSORLG00015013678	rbm4.1	100	68.810	ENSCSEG00000014365	rbm4.1	100	68.810	Cynoglossus_semilaevis
ENSORLG00015013678	rbm4.1	100	77.990	ENSCVAG00000019349	rbm4.1	100	77.990	Cyprinodon_variegatus
ENSORLG00015013678	rbm4.1	100	65.888	ENSDARG00000036386	rbm4.1	100	65.888	Danio_rerio
ENSORLG00015013678	rbm4.1	100	61.939	ENSELUG00000013205	rbm4.1	100	59.815	Esox_lucius
ENSORLG00015013678	rbm4.1	100	77.804	ENSFHEG00000022926	rbm4.1	100	77.804	Fundulus_heteroclitus
ENSORLG00015013678	rbm4.1	92	49.746	ENSGMOG00000007455	-	99	48.946	Gadus_morhua
ENSORLG00015013678	rbm4.1	100	64.133	ENSGMOG00000007464	rbm4.1	100	65.321	Gadus_morhua
ENSORLG00015013678	rbm4.1	100	75.714	ENSGAFG00000019302	rbm4.1	100	75.714	Gambusia_affinis
ENSORLG00015013678	rbm4.1	99	89.362	ENSGACG00000000822	rbm4.1	100	89.840	Gasterosteus_aculeatus
ENSORLG00015013678	rbm4.1	90	49.602	ENSGACG00000000821	-	90	49.211	Gasterosteus_aculeatus
ENSORLG00015013678	rbm4.1	100	79.097	ENSHBUG00000011610	rbm4.1	100	79.097	Haplochromis_burtoni
ENSORLG00015013678	rbm4.1	92	67.179	ENSHCOG00000011403	rbm4.1	95	67.179	Hippocampus_comes
ENSORLG00015013678	rbm4.1	100	58.581	ENSIPUG00000022931	rbm4.1	100	58.904	Ictalurus_punctatus
ENSORLG00015013678	rbm4.1	100	48.113	ENSIPUG00000022937	rbm4.2	100	48.463	Ictalurus_punctatus
ENSORLG00015013678	rbm4.1	100	75.238	ENSKMAG00000006556	rbm4.1	100	75.238	Kryptolebias_marmoratus
ENSORLG00015013678	rbm4.1	99	47.255	ENSLBEG00000019756	-	90	60.897	Labrus_bergylta
ENSORLG00015013678	rbm4.1	100	78.385	ENSLBEG00000019782	rbm4.1	100	78.385	Labrus_bergylta
ENSORLG00015013678	rbm4.1	95	49.386	ENSMAMG00000001760	-	95	48.403	Mastacembelus_armatus
ENSORLG00015013678	rbm4.1	100	79.335	ENSMAMG00000001765	rbm4.1	100	79.335	Mastacembelus_armatus
ENSORLG00015013678	rbm4.1	100	79.097	ENSMZEG00005009205	rbm4.1	100	79.097	Maylandia_zebra
ENSORLG00015013678	rbm4.1	100	76.359	ENSMMOG00000020479	rbm4.1	100	76.359	Mola_mola
ENSORLG00015013678	rbm4.1	100	78.571	ENSMALG00000020544	rbm4.1	100	78.571	Monopterus_albus
ENSORLG00015013678	rbm4.1	96	50.123	ENSMALG00000020557	-	96	49.377	Monopterus_albus
ENSORLG00015013678	rbm4.1	100	79.097	ENSNBRG00000017755	rbm4.1	100	79.097	Neolamprologus_brichardi
ENSORLG00015013678	rbm4.1	100	78.860	ENSONIG00000015730	rbm4.1	100	78.860	Oreochromis_niloticus
ENSORLG00015013678	rbm4.1	100	99.760	ENSORLG00000012496	rbm4.1	100	99.760	Oryzias_latipes
ENSORLG00015013678	rbm4.1	100	99.760	ENSORLG00020012454	rbm4.1	100	99.760	Oryzias_latipes_hni
ENSORLG00015013678	rbm4.1	100	98.082	ENSOMEG00000001001	rbm4.1	100	98.082	Oryzias_melastigma
ENSORLG00015013678	rbm4.1	100	55.506	ENSPKIG00000020805	rbm4.1	85	77.536	Paramormyrops_kingsleyae
ENSORLG00015013678	rbm4.1	99	46.135	ENSPFOG00000012685	-	99	45.863	Poecilia_formosa
ENSORLG00015013678	rbm4.1	100	75.952	ENSPFOG00000012675	rbm4.1	100	75.952	Poecilia_formosa
ENSORLG00015013678	rbm4.1	100	75.952	ENSPLAG00000018572	rbm4.1	100	75.952	Poecilia_latipinna
ENSORLG00015013678	rbm4.1	100	75.952	ENSPMEG00000006290	rbm4.1	100	75.952	Poecilia_mexicana
ENSORLG00015013678	rbm4.1	99	67.778	ENSPREG00000003764	-	99	43.287	Poecilia_reticulata
ENSORLG00015013678	rbm4.1	100	75.952	ENSPREG00000003724	rbm4.1	100	75.952	Poecilia_reticulata
ENSORLG00015013678	rbm4.1	100	79.097	ENSPNYG00000004662	rbm4.1	100	79.097	Pundamilia_nyererei
ENSORLG00015013678	rbm4.1	100	62.911	ENSPNAG00000002539	rbm4.1	100	63.146	Pygocentrus_nattereri
ENSORLG00015013678	rbm4.1	100	50.351	ENSPNAG00000013057	rbm4.2	100	50.351	Pygocentrus_nattereri
ENSORLG00015013678	rbm4.1	100	60.187	ENSSFOG00015021996	sf1	100	60.422	Scleropages_formosus
ENSORLG00015013678	rbm4.1	100	75.297	ENSSMAG00000007571	rbm4.1	100	75.772	Scophthalmus_maximus
ENSORLG00015013678	rbm4.1	100	79.810	ENSSDUG00000003925	rbm4.1	100	79.810	Seriola_dumerili
ENSORLG00015013678	rbm4.1	99	49.165	ENSSDUG00000003936	-	99	47.032	Seriola_dumerili
ENSORLG00015013678	rbm4.1	100	79.810	ENSSLDG00000013147	rbm4.1	100	79.810	Seriola_lalandi_dorsalis
ENSORLG00015013678	rbm4.1	95	48.762	ENSSLDG00000013157	-	99	48.268	Seriola_lalandi_dorsalis
ENSORLG00015013678	rbm4.1	100	79.621	ENSSPAG00000019053	rbm4.1	100	80.332	Stegastes_partitus
ENSORLG00015013678	rbm4.1	99	46.283	ENSSPAG00000019046	-	99	46.283	Stegastes_partitus
ENSORLG00015013678	rbm4.1	99	43.868	ENSTRUG00000013328	-	99	44.366	Takifugu_rubripes
ENSORLG00015013678	rbm4.1	100	71.429	ENSTRUG00000013334	rbm4.1	100	71.429	Takifugu_rubripes
ENSORLG00015013678	rbm4.1	96	45.545	ENSTNIG00000000316	-	96	45.843	Tetraodon_nigroviridis
ENSORLG00015013678	rbm4.1	100	53.828	ENSTNIG00000004821	rbm4.1	100	84.651	Tetraodon_nigroviridis
ENSORLG00015013678	rbm4.1	100	75.476	ENSXCOG00000003731	rbm4.1	100	75.476	Xiphophorus_couchianus
ENSORLG00015013678	rbm4.1	100	75.714	ENSXMAG00000008069	rbm4.1	100	75.714	Xiphophorus_maculatus
ENSORLG00015013678	rbm4.1	94	71.779	ENSXMAG00000008059	-	99	45.863	Xiphophorus_maculatus