EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015013705 (Gene tree)
Gene ID: -
Gene Symbol: prpf18
Alias: -
Full Name: PRP18 pre-mRNA processing factor 18 homolog (yeast)
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 11433 bases
Position: chr6:22141108-22152540
Accession: ZDB-GENE-040704-45
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015030149	PRP4	PF08799.11	2.1e-13	1	1
ENSORLP00015030155	PRP4	PF08799.11	2.2e-13	1	1
ENSORLP00015030149	Prp18	PF02840.15	4.4e-61	1	1
ENSORLP00015030155	Prp18	PF02840.15	4.5e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015020024	-	1213	-	ENSORLP00015030149	341 (aa)	-	-
ENSORLT00015032797	-	1240	-	ENSORLP00015030155	350 (aa)	-	-

Gene Model

Click here to download ENSORLG00015013705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015013705's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015013705	prpf18	100	84.211	ENSG00000165630	PRPF18	100	84.211	Homo_sapiens
ENSORLG00015013705	prpf18	100	93.255	ENSAPOG00000024177	prpf18	100	93.255	Acanthochromis_polyacanthus
ENSORLG00015013705	prpf18	100	84.211	ENSAMEG00000013591	-	100	84.211	Ailuropoda_melanoleuca
ENSORLG00015013705	prpf18	100	92.669	ENSACIG00000001186	prpf18	100	92.669	Amphilophus_citrinellus
ENSORLG00015013705	prpf18	98	93.413	ENSAOCG00000006572	prpf18	94	93.275	Amphiprion_ocellaris
ENSORLG00015013705	prpf18	100	93.548	ENSAPEG00000004564	prpf18	100	93.548	Amphiprion_percula
ENSORLG00015013705	prpf18	100	92.669	ENSATEG00000000303	prpf18	100	92.669	Anabas_testudineus
ENSORLG00015013705	prpf18	99	81.471	ENSAPLG00000003387	-	99	81.471	Anas_platyrhynchos
ENSORLG00015013705	prpf18	100	84.012	ENSACAG00000000818	-	100	84.012	Anolis_carolinensis
ENSORLG00015013705	prpf18	100	83.918	ENSANAG00000037445	-	100	83.918	Aotus_nancymaae
ENSORLG00015013705	prpf18	100	92.669	ENSACLG00000026296	prpf18	100	92.669	Astatotilapia_calliptera
ENSORLG00015013705	prpf18	100	88.286	ENSAMXG00000012848	prpf18	100	88.286	Astyanax_mexicanus
ENSORLG00015013705	prpf18	100	84.211	ENSBTAG00000017244	PRPF18	100	84.211	Bos_taurus
ENSORLG00015013705	prpf18	98	40.230	WBGene00009320	F32B6.3	97	40.058	Caenorhabditis_elegans
ENSORLG00015013705	prpf18	100	83.918	ENSCJAG00000009432	-	100	83.918	Callithrix_jacchus
ENSORLG00015013705	prpf18	100	84.211	ENSCAFG00000004735	-	100	84.211	Canis_familiaris
ENSORLG00015013705	prpf18	100	84.211	ENSCAFG00020007712	-	100	84.211	Canis_lupus_dingo
ENSORLG00015013705	prpf18	100	84.211	ENSCHIG00000000499	-	100	84.211	Capra_hircus
ENSORLG00015013705	prpf18	100	83.333	ENSTSYG00000003517	-	100	83.333	Carlito_syrichta
ENSORLG00015013705	prpf18	100	84.211	ENSCPOG00000021069	-	100	84.211	Cavia_porcellus
ENSORLG00015013705	prpf18	100	83.918	ENSCCAG00000036822	-	100	83.918	Cebus_capucinus
ENSORLG00015013705	prpf18	100	73.392	ENSCATG00000016633	-	100	73.392	Cercocebus_atys
ENSORLG00015013705	prpf18	100	84.211	ENSCLAG00000011770	-	100	84.211	Chinchilla_lanigera
ENSORLG00015013705	prpf18	100	82.621	ENSCSAG00000013109	-	100	82.621	Chlorocebus_sabaeus
ENSORLG00015013705	prpf18	100	78.933	ENSCPBG00000003100	-	100	79.775	Chrysemys_picta_bellii
ENSORLG00015013705	prpf18	99	54.412	ENSCING00000020481	-	97	53.890	Ciona_intestinalis
ENSORLG00015013705	prpf18	99	54.070	ENSCSAVG00000010546	-	99	53.666	Ciona_savignyi
ENSORLG00015013705	prpf18	100	84.211	ENSCANG00000034900	-	100	84.211	Colobus_angolensis_palliatus
ENSORLG00015013705	prpf18	100	84.211	ENSCGRG00001023665	Prpf18	100	84.211	Cricetulus_griseus_chok1gshd
ENSORLG00015013705	prpf18	100	84.211	ENSCGRG00000014690	Prpf18	100	84.211	Cricetulus_griseus_crigri
ENSORLG00015013705	prpf18	100	90.029	ENSCSEG00000005536	prpf18	99	90.029	Cynoglossus_semilaevis
ENSORLG00015013705	prpf18	100	90.616	ENSCVAG00000012401	prpf18	100	90.616	Cyprinodon_variegatus
ENSORLG00015013705	prpf18	100	88.889	ENSDARG00000058306	prpf18	100	88.889	Danio_rerio
ENSORLG00015013705	prpf18	100	84.211	ENSDNOG00000035607	-	100	84.211	Dasypus_novemcinctus
ENSORLG00015013705	prpf18	100	83.918	ENSDORG00000000858	Prpf18	100	83.918	Dipodomys_ordii
ENSORLG00015013705	prpf18	99	50.888	FBgn0027784	Prp18	98	50.888	Drosophila_melanogaster
ENSORLG00015013705	prpf18	100	76.316	ENSETEG00000015060	-	100	76.316	Echinops_telfairi
ENSORLG00015013705	prpf18	100	70.605	ENSEBUG00000016502	prpf18	99	69.653	Eptatretus_burgeri
ENSORLG00015013705	prpf18	100	83.918	ENSEASG00005019373	-	100	83.918	Equus_asinus_asinus
ENSORLG00015013705	prpf18	100	83.918	ENSECAG00000006997	PRPF18	100	83.918	Equus_caballus
ENSORLG00015013705	prpf18	92	50.949	ENSEEUG00000001171	-	79	100.000	Erinaceus_europaeus
ENSORLG00015013705	prpf18	100	86.932	ENSELUG00000022190	prpf18	100	86.932	Esox_lucius
ENSORLG00015013705	prpf18	100	83.918	ENSFCAG00000004436	-	100	83.918	Felis_catus
ENSORLG00015013705	prpf18	93	79.385	ENSFALG00000001912	-	97	79.692	Ficedula_albicollis
ENSORLG00015013705	prpf18	94	86.250	ENSFDAG00000014026	-	100	86.250	Fukomys_damarensis
ENSORLG00015013705	prpf18	99	57.101	ENSFDAG00000010713	-	97	57.101	Fukomys_damarensis
ENSORLG00015013705	prpf18	80	95.238	ENSFHEG00000020125	prpf18	98	95.131	Fundulus_heteroclitus
ENSORLG00015013705	prpf18	99	87.059	ENSGMOG00000012210	prpf18	99	87.059	Gadus_morhua
ENSORLG00015013705	prpf18	100	82.164	ENSGALG00000043593	-	100	82.164	Gallus_gallus
ENSORLG00015013705	prpf18	100	90.323	ENSGAFG00000006034	prpf18	100	90.323	Gambusia_affinis
ENSORLG00015013705	prpf18	100	88.563	ENSGACG00000012232	prpf18	100	88.563	Gasterosteus_aculeatus
ENSORLG00015013705	prpf18	100	82.749	ENSGAGG00000016878	-	100	82.749	Gopherus_agassizii
ENSORLG00015013705	prpf18	92	83.228	ENSGGOG00000025188	-	96	83.228	Gorilla_gorilla
ENSORLG00015013705	prpf18	100	92.669	ENSHBUG00000010264	prpf18	100	92.669	Haplochromis_burtoni
ENSORLG00015013705	prpf18	100	84.211	ENSHGLG00000018534	PRPF18	100	84.211	Heterocephalus_glaber_female
ENSORLG00015013705	prpf18	94	85.938	ENSHGLG00100012161	-	98	85.938	Heterocephalus_glaber_male
ENSORLG00015013705	prpf18	100	92.669	ENSHCOG00000015987	prpf18	100	92.669	Hippocampus_comes
ENSORLG00015013705	prpf18	100	84.136	ENSIPUG00000007432	prpf18	100	83.853	Ictalurus_punctatus
ENSORLG00015013705	prpf18	100	83.626	ENSSTOG00000008735	-	100	83.626	Ictidomys_tridecemlineatus
ENSORLG00015013705	prpf18	100	84.211	ENSJJAG00000024041	-	100	84.211	Jaculus_jaculus
ENSORLG00015013705	prpf18	100	62.974	ENSJJAG00000015191	-	100	62.974	Jaculus_jaculus
ENSORLG00015013705	prpf18	100	91.202	ENSKMAG00000012124	prpf18	100	91.202	Kryptolebias_marmoratus
ENSORLG00015013705	prpf18	98	89.286	ENSLBEG00000028466	prpf18	99	89.286	Labrus_bergylta
ENSORLG00015013705	prpf18	100	82.749	ENSLACG00000009885	prpf18	100	83.333	Latimeria_chalumnae
ENSORLG00015013705	prpf18	100	88.012	ENSLOCG00000016736	prpf18	100	88.012	Lepisosteus_oculatus
ENSORLG00015013705	prpf18	100	84.211	ENSLAFG00000007753	-	100	84.211	Loxodonta_africana
ENSORLG00015013705	prpf18	100	84.211	ENSMFAG00000000540	-	100	84.211	Macaca_fascicularis
ENSORLG00015013705	prpf18	100	84.211	ENSMMUG00000015071	PRPF18	93	93.377	Macaca_mulatta
ENSORLG00015013705	prpf18	100	84.211	ENSMNEG00000024679	-	100	84.211	Macaca_nemestrina
ENSORLG00015013705	prpf18	100	69.006	ENSMLEG00000031715	-	100	69.006	Mandrillus_leucophaeus
ENSORLG00015013705	prpf18	100	92.669	ENSMAMG00000006610	prpf18	100	92.669	Mastacembelus_armatus
ENSORLG00015013705	prpf18	100	92.669	ENSMZEG00005019392	prpf18	100	92.669	Maylandia_zebra
ENSORLG00015013705	prpf18	100	82.164	ENSMGAG00000005023	-	100	82.164	Meleagris_gallopavo
ENSORLG00015013705	prpf18	100	83.918	ENSMICG00000006572	-	100	83.918	Microcebus_murinus
ENSORLG00015013705	prpf18	100	84.211	ENSMOCG00000021468	Prpf18	100	84.211	Microtus_ochrogaster
ENSORLG00015013705	prpf18	100	92.375	ENSMMOG00000013012	prpf18	100	92.375	Mola_mola
ENSORLG00015013705	prpf18	100	76.316	ENSMODG00000024043	-	100	76.316	Monodelphis_domestica
ENSORLG00015013705	prpf18	99	77.011	ENSMODG00000016902	-	95	77.011	Monodelphis_domestica
ENSORLG00015013705	prpf18	100	84.638	ENSMALG00000005486	prpf18	100	84.928	Monopterus_albus
ENSORLG00015013705	prpf18	100	84.795	MGP_CAROLIEiJ_G0023143	Prpf18	100	94.521	Mus_caroli
ENSORLG00015013705	prpf18	100	84.795	ENSMUSG00000039449	Prpf18	100	94.521	Mus_musculus
ENSORLG00015013705	prpf18	100	84.503	MGP_PahariEiJ_G0019203	Prpf18	100	94.521	Mus_pahari
ENSORLG00015013705	prpf18	100	84.503	MGP_SPRETEiJ_G0024061	Prpf18	100	94.521	Mus_spretus
ENSORLG00015013705	prpf18	100	83.918	ENSMPUG00000000938	-	100	83.918	Mustela_putorius_furo
ENSORLG00015013705	prpf18	100	84.503	ENSMLUG00000009200	-	100	84.503	Myotis_lucifugus
ENSORLG00015013705	prpf18	100	84.211	ENSNGAG00000012500	-	100	84.211	Nannospalax_galili
ENSORLG00015013705	prpf18	68	81.897	ENSNGAG00000023550	-	83	81.897	Nannospalax_galili
ENSORLG00015013705	prpf18	100	92.669	ENSNBRG00000001778	prpf18	100	92.669	Neolamprologus_brichardi
ENSORLG00015013705	prpf18	100	84.211	ENSNLEG00000012186	-	100	84.211	Nomascus_leucogenys
ENSORLG00015013705	prpf18	76	72.973	ENSMEUG00000005032	-	75	72.973	Notamacropus_eugenii
ENSORLG00015013705	prpf18	77	64.906	ENSOPRG00000002153	-	100	64.906	Ochotona_princeps
ENSORLG00015013705	prpf18	100	83.626	ENSODEG00000003770	-	100	83.626	Octodon_degus
ENSORLG00015013705	prpf18	98	92.515	ENSONIG00000014854	prpf18	96	92.515	Oreochromis_niloticus
ENSORLG00015013705	prpf18	100	83.918	ENSOANG00000015404	-	100	83.918	Ornithorhynchus_anatinus
ENSORLG00015013705	prpf18	100	84.503	ENSOCUG00000027756	-	96	85.321	Oryctolagus_cuniculus
ENSORLG00015013705	prpf18	100	99.429	ENSORLG00000010293	prpf18	100	99.429	Oryzias_latipes
ENSORLG00015013705	prpf18	100	99.429	ENSORLG00020001530	prpf18	100	99.429	Oryzias_latipes_hni
ENSORLG00015013705	prpf18	100	97.067	ENSOMEG00000009167	prpf18	100	97.067	Oryzias_melastigma
ENSORLG00015013705	prpf18	100	83.918	ENSOGAG00000007294	-	100	83.918	Otolemur_garnettii
ENSORLG00015013705	prpf18	100	82.621	ENSOARG00000006243	-	100	82.621	Ovis_aries
ENSORLG00015013705	prpf18	100	84.211	ENSPPAG00000041959	-	100	84.211	Pan_paniscus
ENSORLG00015013705	prpf18	100	83.918	ENSPPRG00000000107	-	100	83.918	Panthera_pardus
ENSORLG00015013705	prpf18	100	83.918	ENSPTIG00000021094	-	100	83.918	Panthera_tigris_altaica
ENSORLG00015013705	prpf18	100	84.211	ENSPTRG00000002306	PRPF18	100	84.211	Pan_troglodytes
ENSORLG00015013705	prpf18	100	83.918	ENSPANG00000023346	-	100	83.918	Papio_anubis
ENSORLG00015013705	prpf18	100	85.470	ENSPKIG00000014128	prpf18	96	85.470	Paramormyrops_kingsleyae
ENSORLG00015013705	prpf18	100	83.041	ENSPSIG00000016064	-	100	83.041	Pelodiscus_sinensis
ENSORLG00015013705	prpf18	100	85.088	ENSPMGG00000016486	prpf18	100	85.088	Periophthalmus_magnuspinnatus
ENSORLG00015013705	prpf18	100	84.503	ENSPEMG00000013704	Prpf18	100	84.503	Peromyscus_maniculatus_bairdii
ENSORLG00015013705	prpf18	100	73.775	ENSPMAG00000000204	prpf18	100	73.775	Petromyzon_marinus
ENSORLG00015013705	prpf18	92	82.595	ENSPCIG00000012963	-	99	82.595	Phascolarctos_cinereus
ENSORLG00015013705	prpf18	100	89.143	ENSPFOG00000017611	prpf18	100	89.143	Poecilia_formosa
ENSORLG00015013705	prpf18	100	89.736	ENSPLAG00000000369	prpf18	100	89.736	Poecilia_latipinna
ENSORLG00015013705	prpf18	100	90.029	ENSPMEG00000005183	prpf18	100	90.029	Poecilia_mexicana
ENSORLG00015013705	prpf18	100	90.323	ENSPREG00000015232	prpf18	100	90.323	Poecilia_reticulata
ENSORLG00015013705	prpf18	100	83.918	ENSPPYG00000002101	PRPF18	100	83.918	Pongo_abelii
ENSORLG00015013705	prpf18	100	66.374	ENSPCAG00000010833	-	100	66.374	Procavia_capensis
ENSORLG00015013705	prpf18	100	79.825	ENSPCOG00000013057	-	100	79.825	Propithecus_coquereli
ENSORLG00015013705	prpf18	100	52.047	ENSPVAG00000002947	-	100	52.047	Pteropus_vampyrus
ENSORLG00015013705	prpf18	100	92.375	ENSPNYG00000003554	prpf18	100	92.375	Pundamilia_nyererei
ENSORLG00015013705	prpf18	100	88.034	ENSPNAG00000023151	prpf18	100	88.034	Pygocentrus_nattereri
ENSORLG00015013705	prpf18	100	84.211	ENSRNOG00000018396	Prpf18	100	84.211	Rattus_norvegicus
ENSORLG00015013705	prpf18	100	83.918	ENSRBIG00000028028	-	100	83.918	Rhinopithecus_bieti
ENSORLG00015013705	prpf18	100	84.211	ENSRROG00000040695	-	100	84.211	Rhinopithecus_roxellana
ENSORLG00015013705	prpf18	100	83.918	ENSSBOG00000034482	-	100	83.918	Saimiri_boliviensis_boliviensis
ENSORLG00015013705	prpf18	100	83.626	ENSSHAG00000016463	-	100	83.626	Sarcophilus_harrisii
ENSORLG00015013705	prpf18	100	69.591	ENSSHAG00000009669	-	100	69.591	Sarcophilus_harrisii
ENSORLG00015013705	prpf18	98	86.087	ENSSFOG00015022118	prpf18	100	80.980	Scleropages_formosus
ENSORLG00015013705	prpf18	74	49.801	ENSSFOG00015021154	-	95	49.004	Scleropages_formosus
ENSORLG00015013705	prpf18	100	90.323	ENSSMAG00000005308	prpf18	100	90.323	Scophthalmus_maximus
ENSORLG00015013705	prpf18	100	94.135	ENSSDUG00000015428	prpf18	100	94.135	Seriola_dumerili
ENSORLG00015013705	prpf18	100	93.842	ENSSLDG00000023989	prpf18	100	93.842	Seriola_lalandi_dorsalis
ENSORLG00015013705	prpf18	100	56.140	ENSSARG00000005307	-	100	56.140	Sorex_araneus
ENSORLG00015013705	prpf18	100	83.333	ENSSPUG00000002619	-	100	83.333	Sphenodon_punctatus
ENSORLG00015013705	prpf18	100	93.842	ENSSPAG00000019502	prpf18	100	93.842	Stegastes_partitus
ENSORLG00015013705	prpf18	100	84.211	ENSSSCG00000026354	-	100	84.211	Sus_scrofa
ENSORLG00015013705	prpf18	100	82.456	ENSTGUG00000002286	-	100	82.456	Taeniopygia_guttata
ENSORLG00015013705	prpf18	100	88.856	ENSTRUG00000011278	prpf18	100	88.856	Takifugu_rubripes
ENSORLG00015013705	prpf18	100	89.443	ENSTNIG00000000911	prpf18	100	89.443	Tetraodon_nigroviridis
ENSORLG00015013705	prpf18	80	98.718	ENSTBEG00000013011	-	79	98.718	Tupaia_belangeri
ENSORLG00015013705	prpf18	100	84.503	ENSTTRG00000011117	PRPF18	100	84.503	Tursiops_truncatus
ENSORLG00015013705	prpf18	91	86.817	ENSUAMG00000001815	-	93	86.817	Ursus_americanus
ENSORLG00015013705	prpf18	100	79.240	ENSUMAG00000012329	-	100	79.240	Ursus_maritimus
ENSORLG00015013705	prpf18	100	78.363	ENSVPAG00000011486	-	100	78.363	Vicugna_pacos
ENSORLG00015013705	prpf18	100	84.211	ENSVVUG00000005453	-	100	84.211	Vulpes_vulpes
ENSORLG00015013705	prpf18	100	75.652	ENSXETG00000024057	prpf18	100	75.362	Xenopus_tropicalis
ENSORLG00015013705	prpf18	100	89.796	ENSXCOG00000020414	prpf18	100	89.796	Xiphophorus_couchianus
ENSORLG00015013705	prpf18	100	90.323	ENSXMAG00000004713	prpf18	91	90.323	Xiphophorus_maculatus