EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015013729 (Gene tree)
Gene ID: -
Gene Symbol: cnot3a
Alias: -
Full Name: CCR4-NOT transcription complex%2C subunit 3a
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 11252 bases
Position: chr16:19805789-19817040
Accession: ZDB-GENE-040927-6
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015012849	Not3	PF04065.15	6.9e-97	1	1
ENSORLP00015030177	Not3	PF04065.15	6e-94	1	1
ENSORLP00015012849	NOT2_3_5	PF04153.18	2.3e-38	1	1
ENSORLP00015030177	NOT2_3_5	PF04153.18	2.3e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015020093	-	5949	-	ENSORLP00015030177	906 (aa)	-	-
ENSORLT00015032814	-	5761	-	ENSORLP00015012849	899 (aa)	-	-

Gene Model

Click here to download ENSORLG00015013729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015013729's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015013729	cnot3a	100	66.559	ENSORLG00015019021	cnot3b	57	61.122

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015013729	cnot3a	68	89.508	ENSG00000088038	CNOT3	100	93.299	Homo_sapiens
ENSORLG00015013729	cnot3a	58	86.851	ENSAPOG00000015002	cnot3b	76	89.170	Acanthochromis_polyacanthus
ENSORLG00015013729	cnot3a	58	89.680	ENSAPOG00000015499	CNOT3	92	89.680	Acanthochromis_polyacanthus
ENSORLG00015013729	cnot3a	68	89.836	ENSAMEG00000004528	CNOT3	85	89.836	Ailuropoda_melanoleuca
ENSORLG00015013729	cnot3a	100	86.980	ENSACIG00000006635	cnot3a	100	95.547	Amphilophus_citrinellus
ENSORLG00015013729	cnot3a	61	91.964	ENSACIG00000003652	cnot3b	98	86.611	Amphilophus_citrinellus
ENSORLG00015013729	cnot3a	61	80.383	ENSAOCG00000018385	-	95	80.383	Amphiprion_ocellaris
ENSORLG00015013729	cnot3a	99	81.271	ENSAOCG00000023769	cnot3a	99	86.429	Amphiprion_ocellaris
ENSORLG00015013729	cnot3a	100	88.864	ENSAPEG00000006624	cnot3a	100	88.644	Amphiprion_percula
ENSORLG00015013729	cnot3a	97	62.706	ENSAPEG00000002640	cnot3b	80	85.532	Amphiprion_percula
ENSORLG00015013729	cnot3a	100	87.637	ENSATEG00000022737	cnot3a	100	88.925	Anabas_testudineus
ENSORLG00015013729	cnot3a	70	89.610	ENSACAG00000016085	CNOT3	95	89.836	Anolis_carolinensis
ENSORLG00015013729	cnot3a	68	89.508	ENSANAG00000025756	CNOT3	85	89.508	Aotus_nancymaae
ENSORLG00015013729	cnot3a	100	89.352	ENSACLG00000021136	cnot3a	100	90.231	Astatotilapia_calliptera
ENSORLG00015013729	cnot3a	100	65.401	ENSAMXG00000009447	cnot3b	70	88.649	Astyanax_mexicanus
ENSORLG00015013729	cnot3a	100	72.941	ENSAMXG00000012359	cnot3a	100	72.619	Astyanax_mexicanus
ENSORLG00015013729	cnot3a	69	88.424	ENSBTAG00000014900	CNOT3	86	89.508	Bos_taurus
ENSORLG00015013729	cnot3a	68	89.508	ENSCJAG00000001094	CNOT3	85	89.508	Callithrix_jacchus
ENSORLG00015013729	cnot3a	68	89.508	ENSCAFG00000002699	CNOT3	85	89.508	Canis_familiaris
ENSORLG00015013729	cnot3a	68	89.508	ENSCAFG00020018359	CNOT3	85	89.508	Canis_lupus_dingo
ENSORLG00015013729	cnot3a	64	86.452	ENSCHIG00000015302	CNOT3	76	89.153	Capra_hircus
ENSORLG00015013729	cnot3a	68	89.508	ENSTSYG00000008058	CNOT3	85	89.508	Carlito_syrichta
ENSORLG00015013729	cnot3a	69	88.424	ENSCAPG00000009533	CNOT3	85	89.508	Cavia_aperea
ENSORLG00015013729	cnot3a	69	88.424	ENSCPOG00000020741	CNOT3	85	89.508	Cavia_porcellus
ENSORLG00015013729	cnot3a	68	89.508	ENSCCAG00000036290	CNOT3	85	89.508	Cebus_capucinus
ENSORLG00015013729	cnot3a	68	89.508	ENSCATG00000030324	CNOT3	85	89.508	Cercocebus_atys
ENSORLG00015013729	cnot3a	69	88.424	ENSCLAG00000003302	CNOT3	100	85.366	Chinchilla_lanigera
ENSORLG00015013729	cnot3a	68	89.508	ENSCSAG00000001900	CNOT3	85	89.508	Chlorocebus_sabaeus
ENSORLG00015013729	cnot3a	70	88.961	ENSCPBG00000011655	CNOT3	89	89.508	Chrysemys_picta_bellii
ENSORLG00015013729	cnot3a	67	57.547	ENSCING00000000293	-	71	67.769	Ciona_intestinalis
ENSORLG00015013729	cnot3a	69	88.103	ENSCANG00000013408	CNOT3	85	89.508	Colobus_angolensis_palliatus
ENSORLG00015013729	cnot3a	74	78.788	ENSCGRG00001000855	Cnot3	85	89.836	Cricetulus_griseus_chok1gshd
ENSORLG00015013729	cnot3a	100	87.243	ENSCSEG00000003574	cnot3a	100	87.892	Cynoglossus_semilaevis
ENSORLG00015013729	cnot3a	100	57.612	ENSCSEG00000016892	cnot3b	70	80.392	Cynoglossus_semilaevis
ENSORLG00015013729	cnot3a	100	85.525	ENSCVAG00000008168	cnot3a	100	85.967	Cyprinodon_variegatus
ENSORLG00015013729	cnot3a	100	74.127	ENSDARG00000007135	cnot3a	100	73.123	Danio_rerio
ENSORLG00015013729	cnot3a	68	89.508	ENSDNOG00000045972	CNOT3	85	89.508	Dasypus_novemcinctus
ENSORLG00015013729	cnot3a	68	89.508	ENSDORG00000008021	Cnot3	100	80.460	Dipodomys_ordii
ENSORLG00015013729	cnot3a	53	100.000	ENSETEG00000006305	CNOT3	59	100.000	Echinops_telfairi
ENSORLG00015013729	cnot3a	71	72.727	ENSEBUG00000010437	cnot3a	82	70.358	Eptatretus_burgeri
ENSORLG00015013729	cnot3a	68	89.508	ENSEASG00005021591	CNOT3	84	89.508	Equus_asinus_asinus
ENSORLG00015013729	cnot3a	68	89.508	ENSECAG00000023181	CNOT3	84	89.508	Equus_caballus
ENSORLG00015013729	cnot3a	100	78.762	ENSELUG00000014743	cnot3a	100	78.694	Esox_lucius
ENSORLG00015013729	cnot3a	74	79.339	ENSFCAG00000014042	CNOT3	85	89.508	Felis_catus
ENSORLG00015013729	cnot3a	100	84.199	ENSFHEG00000023166	cnot3a	95	98.291	Fundulus_heteroclitus
ENSORLG00015013729	cnot3a	94	78.049	ENSGMOG00000005365	cnot3a	98	76.771	Gadus_morhua
ENSORLG00015013729	cnot3a	100	86.755	ENSGAFG00000013094	cnot3a	100	87.196	Gambusia_affinis
ENSORLG00015013729	cnot3a	94	77.546	ENSGACG00000011489	cnot3a	98	80.513	Gasterosteus_aculeatus
ENSORLG00015013729	cnot3a	69	83.000	ENSGAGG00000012677	CNOT3	94	87.156	Gopherus_agassizii
ENSORLG00015013729	cnot3a	68	89.508	ENSGGOG00000012996	CNOT3	85	89.508	Gorilla_gorilla
ENSORLG00015013729	cnot3a	100	89.462	ENSHBUG00000005275	cnot3a	100	90.340	Haplochromis_burtoni
ENSORLG00015013729	cnot3a	69	88.424	ENSHGLG00000008821	CNOT3	100	80.460	Heterocephalus_glaber_female
ENSORLG00015013729	cnot3a	59	92.511	ENSHGLG00100006181	CNOT3	100	80.460	Heterocephalus_glaber_male
ENSORLG00015013729	cnot3a	100	83.060	ENSHCOG00000020968	cnot3a	100	85.027	Hippocampus_comes
ENSORLG00015013729	cnot3a	100	67.069	ENSIPUG00000000167	cnot3	62	94.444	Ictalurus_punctatus
ENSORLG00015013729	cnot3a	68	89.508	ENSSTOG00000028248	CNOT3	85	89.508	Ictidomys_tridecemlineatus
ENSORLG00015013729	cnot3a	68	89.836	ENSJJAG00000014594	Cnot3	100	80.460	Jaculus_jaculus
ENSORLG00015013729	cnot3a	100	87.991	ENSKMAG00000004863	cnot3a	100	97.024	Kryptolebias_marmoratus
ENSORLG00015013729	cnot3a	53	96.094	ENSLBEG00000017296	cnot3a	65	96.094	Labrus_bergylta
ENSORLG00015013729	cnot3a	96	64.270	ENSLBEG00000018278	cnot3b	72	90.196	Labrus_bergylta
ENSORLG00015013729	cnot3a	70	86.495	ENSLACG00000009742	CNOT3	94	87.869	Latimeria_chalumnae
ENSORLG00015013729	cnot3a	54	91.758	ENSLOCG00000000005	cnot3b	79	91.758	Lepisosteus_oculatus
ENSORLG00015013729	cnot3a	68	88.889	ENSLAFG00000022133	CNOT3	85	88.889	Loxodonta_africana
ENSORLG00015013729	cnot3a	68	89.508	ENSMFAG00000040073	CNOT3	85	89.508	Macaca_fascicularis
ENSORLG00015013729	cnot3a	61	92.017	ENSMMUG00000009698	CNOT3	100	95.098	Macaca_mulatta
ENSORLG00015013729	cnot3a	68	89.508	ENSMNEG00000036750	CNOT3	85	89.508	Macaca_nemestrina
ENSORLG00015013729	cnot3a	68	89.508	ENSMLEG00000036579	CNOT3	84	89.508	Mandrillus_leucophaeus
ENSORLG00015013729	cnot3a	100	88.901	ENSMAMG00000019397	cnot3a	100	89.011	Mastacembelus_armatus
ENSORLG00015013729	cnot3a	100	89.352	ENSMZEG00005016304	cnot3a	100	90.231	Maylandia_zebra
ENSORLG00015013729	cnot3a	74	78.788	ENSMAUG00000014996	Cnot3	85	89.836	Mesocricetus_auratus
ENSORLG00015013729	cnot3a	68	89.508	ENSMICG00000002370	CNOT3	84	89.508	Microcebus_murinus
ENSORLG00015013729	cnot3a	100	84.413	ENSMMOG00000016446	cnot3a	97	93.590	Mola_mola
ENSORLG00015013729	cnot3a	61	89.744	ENSMMOG00000013086	cnot3b	74	87.045	Mola_mola
ENSORLG00015013729	cnot3a	60	85.246	ENSMALG00000004936	cnot3b	74	86.824	Monopterus_albus
ENSORLG00015013729	cnot3a	100	87.019	ENSMALG00000009204	cnot3a	100	87.912	Monopterus_albus
ENSORLG00015013729	cnot3a	78	89.836	MGP_CAROLIEiJ_G0029095	Cnot3	100	97.000	Mus_caroli
ENSORLG00015013729	cnot3a	78	89.836	ENSMUSG00000035632	Cnot3	100	97.000	Mus_musculus
ENSORLG00015013729	cnot3a	78	89.836	MGP_PahariEiJ_G0020964	Cnot3	100	97.000	Mus_pahari
ENSORLG00015013729	cnot3a	78	89.836	MGP_SPRETEiJ_G0030148	Cnot3	100	97.000	Mus_spretus
ENSORLG00015013729	cnot3a	69	88.424	ENSMPUG00000010352	CNOT3	85	89.508	Mustela_putorius_furo
ENSORLG00015013729	cnot3a	68	89.508	ENSNGAG00000013266	Cnot3	85	89.508	Nannospalax_galili
ENSORLG00015013729	cnot3a	88	77.391	ENSNBRG00000003336	cnot3b	95	89.381	Neolamprologus_brichardi
ENSORLG00015013729	cnot3a	100	87.267	ENSNBRG00000002401	cnot3a	100	88.255	Neolamprologus_brichardi
ENSORLG00015013729	cnot3a	68	89.508	ENSNLEG00000006272	CNOT3	84	89.508	Nomascus_leucogenys
ENSORLG00015013729	cnot3a	74	78.512	ENSODEG00000000705	CNOT3	100	88.608	Octodon_degus
ENSORLG00015013729	cnot3a	100	88.938	ENSONIG00000006568	cnot3a	100	89.704	Oreochromis_niloticus
ENSORLG00015013729	cnot3a	78	73.067	ENSOCUG00000007691	CNOT3	85	89.508	Oryctolagus_cuniculus
ENSORLG00015013729	cnot3a	100	99.119	ENSORLG00000011174	cnot3a	100	99.112	Oryzias_latipes
ENSORLG00015013729	cnot3a	100	99.224	ENSORLG00020008009	cnot3a	100	99.224	Oryzias_latipes_hni
ENSORLG00015013729	cnot3a	100	96.354	ENSOMEG00000010309	cnot3a	100	96.354	Oryzias_melastigma
ENSORLG00015013729	cnot3a	68	89.508	ENSOGAG00000006945	CNOT3	85	89.508	Otolemur_garnettii
ENSORLG00015013729	cnot3a	64	62.975	ENSOARG00000002981	CNOT3	67	90.909	Ovis_aries
ENSORLG00015013729	cnot3a	68	89.508	ENSPPAG00000002748	CNOT3	85	89.508	Pan_paniscus
ENSORLG00015013729	cnot3a	74	79.339	ENSPPRG00000011705	CNOT3	85	89.508	Panthera_pardus
ENSORLG00015013729	cnot3a	63	87.948	ENSPTIG00000008781	CNOT3	97	88.235	Panthera_tigris_altaica
ENSORLG00015013729	cnot3a	68	89.508	ENSPTRG00000011444	CNOT3	85	89.508	Pan_troglodytes
ENSORLG00015013729	cnot3a	68	89.508	ENSPTRG00000046717	-	85	89.508	Pan_troglodytes
ENSORLG00015013729	cnot3a	68	89.508	ENSPANG00000009375	CNOT3	85	89.508	Papio_anubis
ENSORLG00015013729	cnot3a	100	65.037	ENSPKIG00000011733	CNOT3	71	58.351	Paramormyrops_kingsleyae
ENSORLG00015013729	cnot3a	61	94.444	ENSPKIG00000015967	-	100	88.627	Paramormyrops_kingsleyae
ENSORLG00015013729	cnot3a	74	78.788	ENSPEMG00000024185	Cnot3	85	89.836	Peromyscus_maniculatus_bairdii
ENSORLG00015013729	cnot3a	69	89.180	ENSPCIG00000023018	CNOT3	90	89.180	Phascolarctos_cinereus
ENSORLG00015013729	cnot3a	100	87.225	ENSPFOG00000008693	cnot3a	94	95.738	Poecilia_formosa
ENSORLG00015013729	cnot3a	100	87.307	ENSPLAG00000013324	cnot3a	100	87.969	Poecilia_latipinna
ENSORLG00015013729	cnot3a	100	87.872	ENSPMEG00000017718	cnot3a	100	87.762	Poecilia_mexicana
ENSORLG00015013729	cnot3a	99	60.939	ENSPREG00000000662	cnot3b	50	61.538	Poecilia_reticulata
ENSORLG00015013729	cnot3a	100	84.573	ENSPREG00000007592	cnot3a	100	94.737	Poecilia_reticulata
ENSORLG00015013729	cnot3a	68	89.180	ENSPPYG00000010372	CNOT3	85	89.180	Pongo_abelii
ENSORLG00015013729	cnot3a	53	92.373	ENSPCAG00000011999	CNOT3	56	92.373	Procavia_capensis
ENSORLG00015013729	cnot3a	68	89.508	ENSPCOG00000017673	CNOT3	84	89.508	Propithecus_coquereli
ENSORLG00015013729	cnot3a	69	87.781	ENSPVAG00000015564	CNOT3	85	88.852	Pteropus_vampyrus
ENSORLG00015013729	cnot3a	100	89.352	ENSPNYG00000002282	cnot3a	100	90.231	Pundamilia_nyererei
ENSORLG00015013729	cnot3a	100	73.247	ENSPNAG00000017679	cnot3a	100	72.766	Pygocentrus_nattereri
ENSORLG00015013729	cnot3a	68	89.836	ENSRNOG00000053234	Cnot3	85	89.836	Rattus_norvegicus
ENSORLG00015013729	cnot3a	68	89.508	ENSRBIG00000031025	CNOT3	85	89.508	Rhinopithecus_bieti
ENSORLG00015013729	cnot3a	68	89.508	ENSRROG00000003872	CNOT3	85	89.508	Rhinopithecus_roxellana
ENSORLG00015013729	cnot3a	76	89.508	ENSSBOG00000030268	CNOT3	85	89.508	Saimiri_boliviensis_boliviensis
ENSORLG00015013729	cnot3a	100	69.231	ENSSFOG00015000248	cnot3	57	58.011	Scleropages_formosus
ENSORLG00015013729	cnot3a	100	69.290	ENSSFOG00015019203	-	100	68.415	Scleropages_formosus
ENSORLG00015013729	cnot3a	100	88.671	ENSSMAG00000013235	cnot3a	100	89.216	Scophthalmus_maximus
ENSORLG00015013729	cnot3a	100	86.980	ENSSDUG00000008181	cnot3a	100	95.142	Seriola_dumerili
ENSORLG00015013729	cnot3a	96	88.864	ENSSLDG00000014733	cnot3a	99	90.227	Seriola_lalandi_dorsalis
ENSORLG00015013729	cnot3a	79	89.286	ENSSPUG00000008510	CNOT3	89	89.508	Sphenodon_punctatus
ENSORLG00015013729	cnot3a	96	90.000	ENSSPAG00000003858	cnot3a	93	97.518	Stegastes_partitus
ENSORLG00015013729	cnot3a	68	89.508	ENSSSCG00000003264	CNOT3	84	89.508	Sus_scrofa
ENSORLG00015013729	cnot3a	100	87.004	ENSTRUG00000015732	cnot3a	100	87.335	Takifugu_rubripes
ENSORLG00015013729	cnot3a	68	89.836	ENSUAMG00000005234	CNOT3	85	89.836	Ursus_americanus
ENSORLG00015013729	cnot3a	66	82.477	ENSUMAG00000010934	CNOT3	100	88.172	Ursus_maritimus
ENSORLG00015013729	cnot3a	68	89.508	ENSVVUG00000008239	CNOT3	84	89.508	Vulpes_vulpes
ENSORLG00015013729	cnot3a	70	86.581	ENSXETG00000003166	cnot3	95	88.387	Xenopus_tropicalis
ENSORLG00015013729	cnot3a	100	80.926	ENSXCOG00000019460	cnot3a	99	98.718	Xiphophorus_couchianus
ENSORLG00015013729	cnot3a	100	86.504	ENSXMAG00000012273	cnot3a	100	85.414	Xiphophorus_maculatus