EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015013838 (Gene tree)
Gene ID: -
Gene Symbol: tsr1
Alias: -
Full Name: TSR1%2C 20S rRNA accumulation%2C homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 9060 bases
Position: chr13:11202415-11211474
Accession: ZDB-GENE-030131-3762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015012942	AARP2CN	PF08142.12	1.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015020192	-	3116	-	ENSORLP00015012942	834 (aa)	-	-

Gene Model

Click here to download ENSORLG00015013838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015013838's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015013838	tsr1	99	54.197	ENSG00000167721	TSR1	99	54.258	Homo_sapiens
ENSORLG00015013838	tsr1	99	84.910	ENSAPOG00000020891	tsr1	100	85.150	Acanthochromis_polyacanthus
ENSORLG00015013838	tsr1	99	54.207	ENSAMEG00000007599	TSR1	99	53.486	Ailuropoda_melanoleuca
ENSORLG00015013838	tsr1	99	83.293	ENSACIG00000007090	tsr1	100	83.293	Amphilophus_citrinellus
ENSORLG00015013838	tsr1	99	85.337	ENSAOCG00000023284	tsr1	100	85.457	Amphiprion_ocellaris
ENSORLG00015013838	tsr1	93	84.774	ENSAPEG00000008452	tsr1	100	84.903	Amphiprion_percula
ENSORLG00015013838	tsr1	99	82.837	ENSATEG00000021961	tsr1	100	83.194	Anabas_testudineus
ENSORLG00015013838	tsr1	91	59.138	ENSAPLG00000013422	TSR1	100	58.854	Anas_platyrhynchos
ENSORLG00015013838	tsr1	71	48.586	ENSACAG00000000859	TSR1	92	48.167	Anolis_carolinensis
ENSORLG00015013838	tsr1	97	55.448	ENSANAG00000031071	TSR1	99	54.678	Aotus_nancymaae
ENSORLG00015013838	tsr1	100	85.287	ENSACLG00000007595	tsr1	100	85.407	Astatotilapia_calliptera
ENSORLG00015013838	tsr1	50	72.381	ENSAMXG00000008470	tsr1	90	72.535	Astyanax_mexicanus
ENSORLG00015013838	tsr1	98	56.024	ENSBTAG00000004225	TSR1	99	54.382	Bos_taurus
ENSORLG00015013838	tsr1	97	54.303	ENSCJAG00000012456	TSR1	99	53.528	Callithrix_jacchus
ENSORLG00015013838	tsr1	89	52.312	ENSCAFG00000019273	-	100	55.556	Canis_familiaris
ENSORLG00015013838	tsr1	99	54.611	ENSCAFG00000002106	-	99	53.782	Canis_familiaris
ENSORLG00015013838	tsr1	99	54.491	ENSCAFG00020009728	TSR1	99	53.661	Canis_lupus_dingo
ENSORLG00015013838	tsr1	99	55.730	ENSCHIG00000023935	TSR1	99	54.982	Capra_hircus
ENSORLG00015013838	tsr1	99	55.235	ENSTSYG00000005468	TSR1	99	54.392	Carlito_syrichta
ENSORLG00015013838	tsr1	92	54.096	ENSCPOG00000014833	TSR1	99	54.275	Cavia_porcellus
ENSORLG00015013838	tsr1	92	53.479	ENSCCAG00000028962	TSR1	98	52.911	Cebus_capucinus
ENSORLG00015013838	tsr1	97	54.202	ENSCATG00000044262	TSR1	98	54.390	Cercocebus_atys
ENSORLG00015013838	tsr1	99	55.716	ENSCLAG00000005567	TSR1	99	54.317	Chinchilla_lanigera
ENSORLG00015013838	tsr1	97	54.324	ENSCSAG00000013788	TSR1	98	54.512	Chlorocebus_sabaeus
ENSORLG00015013838	tsr1	98	56.364	ENSCPBG00000020363	TSR1	98	55.503	Chrysemys_picta_bellii
ENSORLG00015013838	tsr1	96	45.031	ENSCING00000020658	-	99	44.240	Ciona_intestinalis
ENSORLG00015013838	tsr1	95	44.078	ENSCSAVG00000001875	-	100	43.681	Ciona_savignyi
ENSORLG00015013838	tsr1	97	56.206	ENSCANG00000033056	TSR1	95	69.595	Colobus_angolensis_palliatus
ENSORLG00015013838	tsr1	99	54.031	ENSCGRG00001023942	Tsr1	99	53.597	Cricetulus_griseus_chok1gshd
ENSORLG00015013838	tsr1	99	49.940	ENSCGRG00000013015	Tsr1	97	65.556	Cricetulus_griseus_crigri
ENSORLG00015013838	tsr1	99	79.087	ENSCSEG00000013009	tsr1	100	79.087	Cynoglossus_semilaevis
ENSORLG00015013838	tsr1	99	83.053	ENSCVAG00000000506	tsr1	100	83.053	Cyprinodon_variegatus
ENSORLG00015013838	tsr1	99	73.413	ENSDARG00000007744	tsr1	100	72.934	Danio_rerio
ENSORLG00015013838	tsr1	99	57.332	ENSDNOG00000004715	TSR1	99	57.243	Dasypus_novemcinctus
ENSORLG00015013838	tsr1	95	49.000	ENSDORG00000023234	-	99	47.625	Dipodomys_ordii
ENSORLG00015013838	tsr1	99	54.765	ENSDORG00000016371	-	99	53.920	Dipodomys_ordii
ENSORLG00015013838	tsr1	96	44.870	FBgn0037073	Tsr1	96	43.696	Drosophila_melanogaster
ENSORLG00015013838	tsr1	88	68.525	ENSETEG00000017534	TSR1	89	67.213	Echinops_telfairi
ENSORLG00015013838	tsr1	95	52.566	ENSEBUG00000013731	TSR1	98	51.064	Eptatretus_burgeri
ENSORLG00015013838	tsr1	99	55.235	ENSEASG00005009302	TSR1	97	54.874	Equus_asinus_asinus
ENSORLG00015013838	tsr1	99	55.181	ENSECAG00000009114	TSR1	99	54.819	Equus_caballus
ENSORLG00015013838	tsr1	100	73.986	ENSELUG00000020984	tsr1	96	73.986	Esox_lucius
ENSORLG00015013838	tsr1	99	54.776	ENSFCAG00000006313	TSR1	99	53.791	Felis_catus
ENSORLG00015013838	tsr1	99	59.643	ENSFALG00000006532	TSR1	99	58.442	Ficedula_albicollis
ENSORLG00015013838	tsr1	99	54.897	ENSFDAG00000006038	TSR1	99	54.172	Fukomys_damarensis
ENSORLG00015013838	tsr1	100	82.458	ENSFHEG00000003626	tsr1	100	82.816	Fundulus_heteroclitus
ENSORLG00015013838	tsr1	99	70.813	ENSGMOG00000010336	tsr1	100	72.249	Gadus_morhua
ENSORLG00015013838	tsr1	100	82.536	ENSGAFG00000012993	tsr1	100	82.656	Gambusia_affinis
ENSORLG00015013838	tsr1	99	78.520	ENSGACG00000010843	tsr1	100	79.167	Gasterosteus_aculeatus
ENSORLG00015013838	tsr1	98	56.000	ENSGAGG00000025619	-	99	55.210	Gopherus_agassizii
ENSORLG00015013838	tsr1	99	54.633	ENSGGOG00000001704	TSR1	99	54.501	Gorilla_gorilla
ENSORLG00015013838	tsr1	100	85.766	ENSHBUG00000017904	tsr1	100	85.766	Haplochromis_burtoni
ENSORLG00015013838	tsr1	96	48.564	ENSHGLG00000015688	-	98	48.010	Heterocephalus_glaber_female
ENSORLG00015013838	tsr1	99	55.836	ENSHGLG00000012806	-	99	54.513	Heterocephalus_glaber_female
ENSORLG00015013838	tsr1	99	55.836	ENSHGLG00100015392	TSR1	99	54.513	Heterocephalus_glaber_male
ENSORLG00015013838	tsr1	99	78.245	ENSHCOG00000001432	tsr1	100	77.284	Hippocampus_comes
ENSORLG00015013838	tsr1	99	72.912	ENSIPUG00000004618	tsr1	100	73.747	Ictalurus_punctatus
ENSORLG00015013838	tsr1	99	55.730	ENSSTOG00000011819	TSR1	99	54.688	Ictidomys_tridecemlineatus
ENSORLG00015013838	tsr1	90	53.113	ENSJJAG00000019505	Tsr1	95	52.318	Jaculus_jaculus
ENSORLG00015013838	tsr1	100	83.114	ENSKMAG00000005763	tsr1	100	83.713	Kryptolebias_marmoratus
ENSORLG00015013838	tsr1	100	82.936	ENSLBEG00000021823	tsr1	100	83.055	Labrus_bergylta
ENSORLG00015013838	tsr1	99	58.629	ENSLACG00000002197	TSR1	100	57.801	Latimeria_chalumnae
ENSORLG00015013838	tsr1	91	80.263	ENSLOCG00000006491	TSR1	99	80.263	Lepisosteus_oculatus
ENSORLG00015013838	tsr1	97	54.446	ENSMFAG00000021330	TSR1	98	54.634	Macaca_fascicularis
ENSORLG00015013838	tsr1	97	54.446	ENSMMUG00000017519	TSR1	98	54.512	Macaca_mulatta
ENSORLG00015013838	tsr1	97	54.324	ENSMNEG00000031382	TSR1	98	54.512	Macaca_nemestrina
ENSORLG00015013838	tsr1	97	54.080	ENSMLEG00000036733	TSR1	98	54.268	Mandrillus_leucophaeus
ENSORLG00015013838	tsr1	100	83.729	ENSMAMG00000017918	tsr1	100	83.729	Mastacembelus_armatus
ENSORLG00015013838	tsr1	99	84.431	ENSMZEG00005007477	tsr1	100	84.671	Maylandia_zebra
ENSORLG00015013838	tsr1	99	57.262	ENSMGAG00000005576	TSR1	100	56.588	Meleagris_gallopavo
ENSORLG00015013838	tsr1	99	56.212	ENSMICG00000012943	TSR1	99	55.168	Microcebus_murinus
ENSORLG00015013838	tsr1	99	54.197	ENSMOCG00000022764	Tsr1	99	53.772	Microtus_ochrogaster
ENSORLG00015013838	tsr1	99	82.353	ENSMMOG00000014280	tsr1	100	81.513	Mola_mola
ENSORLG00015013838	tsr1	97	56.227	ENSMODG00000010658	TSR1	99	56.227	Monodelphis_domestica
ENSORLG00015013838	tsr1	99	83.333	ENSMALG00000011681	tsr1	100	82.974	Monopterus_albus
ENSORLG00015013838	tsr1	99	54.928	MGP_CAROLIEiJ_G0016727	Tsr1	99	53.653	Mus_caroli
ENSORLG00015013838	tsr1	99	55.114	ENSMUSG00000038335	Tsr1	99	53.837	Mus_musculus
ENSORLG00015013838	tsr1	99	55.769	MGP_PahariEiJ_G0017864	Tsr1	99	54.251	Mus_pahari
ENSORLG00015013838	tsr1	99	55.409	MGP_SPRETEiJ_G0017570	Tsr1	99	54.132	Mus_spretus
ENSORLG00015013838	tsr1	81	57.185	ENSMPUG00000013000	TSR1	100	56.058	Mustela_putorius_furo
ENSORLG00015013838	tsr1	98	56.136	ENSMLUG00000003505	TSR1	99	55.502	Myotis_lucifugus
ENSORLG00015013838	tsr1	100	85.167	ENSNBRG00000020728	tsr1	100	85.407	Neolamprologus_brichardi
ENSORLG00015013838	tsr1	99	49.396	ENSNLEG00000017184	TSR1	95	66.176	Nomascus_leucogenys
ENSORLG00015013838	tsr1	98	51.446	ENSMEUG00000015828	TSR1	99	51.381	Notamacropus_eugenii
ENSORLG00015013838	tsr1	99	83.274	ENSONIG00000013131	tsr1	100	83.274	Oreochromis_niloticus
ENSORLG00015013838	tsr1	97	55.379	ENSOCUG00000014256	TSR1	99	54.733	Oryctolagus_cuniculus
ENSORLG00015013838	tsr1	100	99.400	ENSORLG00000004926	tsr1	100	99.400	Oryzias_latipes
ENSORLG00015013838	tsr1	100	99.400	ENSORLG00020008792	tsr1	100	99.400	Oryzias_latipes_hni
ENSORLG00015013838	tsr1	100	94.146	ENSOMEG00000004830	tsr1	100	93.668	Oryzias_melastigma
ENSORLG00015013838	tsr1	99	54.686	ENSOGAG00000004492	TSR1	99	54.102	Otolemur_garnettii
ENSORLG00015013838	tsr1	99	55.797	ENSOARG00000015437	TSR1	97	54.567	Ovis_aries
ENSORLG00015013838	tsr1	99	54.197	ENSPPAG00000036355	TSR1	99	54.258	Pan_paniscus
ENSORLG00015013838	tsr1	99	54.414	ENSPPRG00000015519	-	99	53.670	Panthera_pardus
ENSORLG00015013838	tsr1	99	54.655	ENSPTIG00000010608	TSR1	99	53.670	Panthera_tigris_altaica
ENSORLG00015013838	tsr1	99	54.197	ENSPTRG00000008547	TSR1	99	54.258	Pan_troglodytes
ENSORLG00015013838	tsr1	97	51.585	ENSPANG00000024463	TSR1	98	52.625	Papio_anubis
ENSORLG00015013838	tsr1	99	71.172	ENSPKIG00000013972	tsr1	100	70.455	Paramormyrops_kingsleyae
ENSORLG00015013838	tsr1	84	56.761	ENSPSIG00000018258	TSR1	98	55.850	Pelodiscus_sinensis
ENSORLG00015013838	tsr1	99	79.087	ENSPMGG00000011577	tsr1	99	78.219	Periophthalmus_magnuspinnatus
ENSORLG00015013838	tsr1	99	53.382	ENSPEMG00000018033	Tsr1	99	52.708	Peromyscus_maniculatus_bairdii
ENSORLG00015013838	tsr1	98	55.822	ENSPCIG00000009357	TSR1	97	55.449	Phascolarctos_cinereus
ENSORLG00015013838	tsr1	99	81.273	ENSPFOG00000004483	TSR1	100	81.633	Poecilia_formosa
ENSORLG00015013838	tsr1	100	82.241	ENSPLAG00000022320	tsr1	100	82.360	Poecilia_latipinna
ENSORLG00015013838	tsr1	100	82.479	ENSPMEG00000004577	tsr1	100	82.837	Poecilia_mexicana
ENSORLG00015013838	tsr1	97	83.436	ENSPREG00000010354	tsr1	96	83.088	Poecilia_reticulata
ENSORLG00015013838	tsr1	99	49.163	ENSPPYG00000007792	TSR1	99	49.758	Pongo_abelii
ENSORLG00015013838	tsr1	51	65.116	ENSPCAG00000012973	-	69	66.667	Procavia_capensis
ENSORLG00015013838	tsr1	99	55.797	ENSPCOG00000017928	TSR1	99	55.048	Propithecus_coquereli
ENSORLG00015013838	tsr1	99	55.314	ENSPVAG00000002162	TSR1	99	54.031	Pteropus_vampyrus
ENSORLG00015013838	tsr1	100	85.287	ENSPNYG00000016163	tsr1	100	85.407	Pundamilia_nyererei
ENSORLG00015013838	tsr1	99	74.762	ENSPNAG00000008659	tsr1	100	74.762	Pygocentrus_nattereri
ENSORLG00015013838	tsr1	99	54.207	ENSRNOG00000002980	Tsr1	99	53.174	Rattus_norvegicus
ENSORLG00015013838	tsr1	97	54.689	ENSRBIG00000040016	TSR1	98	54.921	Rhinopithecus_bieti
ENSORLG00015013838	tsr1	97	54.811	ENSRROG00000030361	TSR1	98	54.800	Rhinopithecus_roxellana
ENSORLG00015013838	tsr1	99	54.753	ENSSBOG00000020785	TSR1	99	54.745	Saimiri_boliviensis_boliviensis
ENSORLG00015013838	tsr1	98	55.596	ENSSHAG00000011394	TSR1	99	55.516	Sarcophilus_harrisii
ENSORLG00015013838	tsr1	99	73.887	ENSSFOG00015005455	tsr1	100	73.646	Scleropages_formosus
ENSORLG00015013838	tsr1	99	82.614	ENSSMAG00000009504	tsr1	100	82.614	Scophthalmus_maximus
ENSORLG00015013838	tsr1	100	85.561	ENSSDUG00000012074	tsr1	100	85.561	Seriola_dumerili
ENSORLG00015013838	tsr1	100	85.646	ENSSLDG00000002031	tsr1	100	85.646	Seriola_lalandi_dorsalis
ENSORLG00015013838	tsr1	92	56.400	ENSSARG00000000759	TSR1	93	56.400	Sorex_araneus
ENSORLG00015013838	tsr1	99	56.770	ENSSPUG00000007042	TSR1	99	56.138	Sphenodon_punctatus
ENSORLG00015013838	tsr1	99	83.871	ENSSPAG00000021951	tsr1	100	85.424	Stegastes_partitus
ENSORLG00015013838	tsr1	98	56.077	ENSSSCG00000038534	TSR1	99	55.102	Sus_scrofa
ENSORLG00015013838	tsr1	89	61.141	ENSTGUG00000005883	TSR1	100	60.343	Taeniopygia_guttata
ENSORLG00015013838	tsr1	99	81.130	ENSTRUG00000004665	tsr1	100	80.649	Takifugu_rubripes
ENSORLG00015013838	tsr1	99	80.606	ENSTNIG00000016196	tsr1	100	80.820	Tetraodon_nigroviridis
ENSORLG00015013838	tsr1	66	72.308	ENSTBEG00000015275	-	66	72.308	Tupaia_belangeri
ENSORLG00015013838	tsr1	99	56.159	ENSTTRG00000001177	TSR1	99	55.072	Tursiops_truncatus
ENSORLG00015013838	tsr1	99	54.227	ENSUAMG00000025160	TSR1	99	53.438	Ursus_americanus
ENSORLG00015013838	tsr1	95	54.017	ENSUMAG00000009294	TSR1	98	53.250	Ursus_maritimus
ENSORLG00015013838	tsr1	83	49.067	ENSVPAG00000000228	TSR1	99	48.217	Vicugna_pacos
ENSORLG00015013838	tsr1	99	54.611	ENSVVUG00000021767	TSR1	99	53.782	Vulpes_vulpes
ENSORLG00015013838	tsr1	99	53.618	ENSXETG00000023797	tsr1	100	53.483	Xenopus_tropicalis
ENSORLG00015013838	tsr1	99	81.250	ENSXCOG00000009635	tsr1	100	80.552	Xiphophorus_couchianus
ENSORLG00015013838	tsr1	100	82.036	ENSXMAG00000001397	tsr1	97	81.916	Xiphophorus_maculatus