EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00015013982 (Gene tree)
Gene ID
-
Gene Symbol
rpa1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Oryzias_latipes_hsok
Status
putative
Strand
Plus strand
Length
21991 bases
Position
chr13:10741869-10763859
Accession
ZDB-GENE-030912-3
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00015013089tRNA_anti-codonPF01336.253.3e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00015020391-3659-ENSORLP00015013089598 (aa)--
Gene Model
Click here to download ENSORLG00015013982's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015013982's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00015013982rpa16968.841ENSORLG00015005867-9468.841
ENSORLG00015013982rpa19958.034ENSORLG00015020383RPA19958.034
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00015013982rpa19986.622ENSAPOG00000011658rpa19986.622Acanthochromis_polyacanthus
ENSORLG00015013982rpa19269.476ENSAPOG00000019409RPA18069.476Acanthochromis_polyacanthus
ENSORLG00015013982rpa19961.538ENSAMEG00000007706RPA19961.538Ailuropoda_melanoleuca
ENSORLG00015013982rpa19675.436ENSACIG00000007277rpa19975.436Amphilophus_citrinellus
ENSORLG00015013982rpa19562.988ENSACIG00000012881RPA19962.988Amphilophus_citrinellus
ENSORLG00015013982rpa19958.540ENSAOCG00000009003RPA19958.851Amphiprion_ocellaris
ENSORLG00015013982rpa110086.477ENSAOCG00000023376rpa19986.477Amphiprion_ocellaris
ENSORLG00015013982rpa19957.208ENSAPEG00000019132RPA19957.511Amphiprion_percula
ENSORLG00015013982rpa110086.644ENSAPEG00000008634rpa19986.644Amphiprion_percula
ENSORLG00015013982rpa19959.598ENSATEG00000006443RPA19959.598Anabas_testudineus
ENSORLG00015013982rpa19583.538ENSATEG00000022024rpa19983.538Anabas_testudineus
ENSORLG00015013982rpa19852.950ENSAPLG00000012442RPA110053.392Anas_platyrhynchos
ENSORLG00015013982rpa19958.000ENSACAG00000014490RPA19958.209Anolis_carolinensis
ENSORLG00015013982rpa19664.527ENSANAG00000023456RPA19864.527Aotus_nancymaae
ENSORLG00015013982rpa19485.027ENSACLG00000006640rpa19985.027Astatotilapia_calliptera
ENSORLG00015013982rpa19960.787ENSACLG00000005223RPA19960.787Astatotilapia_calliptera
ENSORLG00015013982rpa19976.756ENSAMXG00000008418rpa19976.923Astyanax_mexicanus
ENSORLG00015013982rpa19962.623ENSBTAG00000009711RPA19962.623Bos_taurus
ENSORLG00015013982rpa17631.478WBGene00017546rpa-17031.478Caenorhabditis_elegans
ENSORLG00015013982rpa19962.357ENSCJAG00000001848RPA19962.745Callithrix_jacchus
ENSORLG00015013982rpa19962.848ENSCAFG00000019249RPA19963.502Canis_familiaris
ENSORLG00015013982rpa19962.848ENSCAFG00020009847RPA19963.502Canis_lupus_dingo
ENSORLG00015013982rpa19962.623ENSCHIG00000026308RPA19963.115Capra_hircus
ENSORLG00015013982rpa19962.480ENSTSYG00000003482-9962.480Carlito_syrichta
ENSORLG00015013982rpa19962.418ENSCPOG00000000035RPA19962.418Cavia_porcellus
ENSORLG00015013982rpa19951.629ENSCCAG00000010981RPA19952.033Cebus_capucinus
ENSORLG00015013982rpa19958.689ENSCLAG00000015045-9958.689Chinchilla_lanigera
ENSORLG00015013982rpa19962.520ENSCLAG00000005185-9962.520Chinchilla_lanigera
ENSORLG00015013982rpa19952.350ENSCSAG00000013833RPA19952.769Chlorocebus_sabaeus
ENSORLG00015013982rpa19662.415ENSCHOG00000013540-9962.415Choloepus_hoffmanni
ENSORLG00015013982rpa17370.252ENSCHOG00000009454-9970.252Choloepus_hoffmanni
ENSORLG00015013982rpa19962.623ENSCPBG00000020377RPA19963.445Chrysemys_picta_bellii
ENSORLG00015013982rpa19943.186ENSCING00000023482-9943.186Ciona_intestinalis
ENSORLG00015013982rpa19864.516ENSCANG00000030911RPA19964.516Colobus_angolensis_palliatus
ENSORLG00015013982rpa19963.132ENSCGRG00001008197Rpa19963.295Cricetulus_griseus_chok1gshd
ENSORLG00015013982rpa18164.229ENSCGRG00000000582Rpa19964.427Cricetulus_griseus_crigri
ENSORLG00015013982rpa19979.008ENSCSEG00000013066rpa19979.008Cynoglossus_semilaevis
ENSORLG00015013982rpa19954.823ENSCSEG00000012726RPA19956.282Cynoglossus_semilaevis
ENSORLG00015013982rpa19657.854ENSCVAG00000013446-9657.854Cyprinodon_variegatus
ENSORLG00015013982rpa19983.940ENSCVAG00000019431rpa19983.940Cyprinodon_variegatus
ENSORLG00015013982rpa19975.920ENSDARG00000003938rpa19975.920Danio_rerio
ENSORLG00015013982rpa19963.097ENSDNOG00000017218RPA19963.097Dasypus_novemcinctus
ENSORLG00015013982rpa19962.582ENSDORG00000006199Rpa19962.582Dipodomys_ordii
ENSORLG00015013982rpa19942.088FBgn0010173RpA-709942.741Drosophila_melanogaster
ENSORLG00015013982rpa18270.408ENSETEG00000017608RPA18270.408Echinops_telfairi
ENSORLG00015013982rpa19863.423ENSEASG00005009372RPA19963.717Equus_asinus_asinus
ENSORLG00015013982rpa19963.072ENSECAG00000023886RPA19963.072Equus_caballus
ENSORLG00015013982rpa17070.096ENSEEUG00000002186-6870.096Erinaceus_europaeus
ENSORLG00015013982rpa18862.712ENSELUG00000006136RPA110062.712Esox_lucius
ENSORLG00015013982rpa19979.339ENSELUG00000021071rpa19979.339Esox_lucius
ENSORLG00015013982rpa19962.092ENSFCAG00000006306RPA19962.092Felis_catus
ENSORLG00015013982rpa19961.211ENSFALG00000006575RPA19961.211Ficedula_albicollis
ENSORLG00015013982rpa19963.235ENSFDAG00000007720RPA19963.235Fukomys_damarensis
ENSORLG00015013982rpa19982.392ENSFHEG00000003580rpa19982.392Fundulus_heteroclitus
ENSORLG00015013982rpa19977.013ENSGMOG00000010382rpa19977.013Gadus_morhua
ENSORLG00015013982rpa19960.591ENSGALG00000003072RPA19960.591Gallus_gallus
ENSORLG00015013982rpa19958.652ENSGAFG00000020953RPA19958.626Gambusia_affinis
ENSORLG00015013982rpa19983.306ENSGAFG00000012916rpa19983.306Gambusia_affinis
ENSORLG00015013982rpa19981.697ENSGACG00000010856rpa19981.697Gasterosteus_aculeatus
ENSORLG00015013982rpa19962.131ENSGAGG00000013611RPA19962.131Gopherus_agassizii
ENSORLG00015013982rpa19964.000ENSGGOG00000014186RPA19964.000Gorilla_gorilla
ENSORLG00015013982rpa19557.904ENSHBUG00000009348RPA19857.904Haplochromis_burtoni
ENSORLG00015013982rpa19986.144ENSHBUG00000017773rpa19986.144Haplochromis_burtoni
ENSORLG00015013982rpa19962.215ENSHGLG00000008846RPA19962.520Heterocephalus_glaber_female
ENSORLG00015013982rpa19952.769ENSHGLG00100002005-9952.846Heterocephalus_glaber_male
ENSORLG00015013982rpa19962.215ENSHGLG00100017755-9962.520Heterocephalus_glaber_male
ENSORLG00015013982rpa19958.564ENSHGLG00100000799-9958.564Heterocephalus_glaber_male
ENSORLG00015013982rpa19972.623ENSHCOG00000001401rpa19972.787Hippocampus_comes
ENSORLG00015013982rpa19945.500ENSHCOG00000000351RPA19845.108Hippocampus_comes
ENSORLG00015013982rpa19975.249ENSIPUG00000004400rpa19975.249Ictalurus_punctatus
ENSORLG00015013982rpa19162.852ENSSTOG00000022475RPA19562.852Ictidomys_tridecemlineatus
ENSORLG00015013982rpa19664.456ENSJJAG00000000876Rpa19864.456Jaculus_jaculus
ENSORLG00015013982rpa19961.462ENSKMAG00000000234RPA19961.462Kryptolebias_marmoratus
ENSORLG00015013982rpa19981.117ENSKMAG00000005605rpa19981.773Kryptolebias_marmoratus
ENSORLG00015013982rpa19767.396ENSLBEG00000002281RPA18267.396Labrus_bergylta
ENSORLG00015013982rpa19982.587ENSLBEG00000021604rpa19982.587Labrus_bergylta
ENSORLG00015013982rpa18161.100ENSLACG00000007210RPA19961.100Latimeria_chalumnae
ENSORLG00015013982rpa19972.546ENSLOCG00000006397rpa19972.712Lepisosteus_oculatus
ENSORLG00015013982rpa19962.097ENSLAFG00000015354RPA19962.097Loxodonta_africana
ENSORLG00015013982rpa18061.368ENSMFAG00000036138-9861.943Macaca_fascicularis
ENSORLG00015013982rpa19962.562ENSMMUG00000011604-9963.036Macaca_mulatta
ENSORLG00015013982rpa19958.814ENSMMUG00000002442-9958.814Macaca_mulatta
ENSORLG00015013982rpa19961.664ENSMNEG00000031632-9962.131Macaca_nemestrina
ENSORLG00015013982rpa18765.275ENSMNEG00000029837-9665.275Macaca_nemestrina
ENSORLG00015013982rpa19858.940ENSMLEG00000038768-9860.269Mandrillus_leucophaeus
ENSORLG00015013982rpa19985.619ENSMAMG00000017993rpa19985.619Mastacembelus_armatus
ENSORLG00015013982rpa19271.860ENSMAMG00000020097RPA19958.321Mastacembelus_armatus
ENSORLG00015013982rpa19960.787ENSMZEG00005024731RPA19960.787Maylandia_zebra
ENSORLG00015013982rpa19985.810ENSMZEG00005007551rpa19985.810Maylandia_zebra
ENSORLG00015013982rpa19959.835ENSMGAG00000005315RPA19859.835Meleagris_gallopavo
ENSORLG00015013982rpa19664.250ENSMAUG00000010474Rpa19964.167Mesocricetus_auratus
ENSORLG00015013982rpa19964.368ENSMICG00000012867RPA19964.052Microcebus_murinus
ENSORLG00015013982rpa19963.218ENSMOCG00000013019Rpa19963.218Microtus_ochrogaster
ENSORLG00015013982rpa19980.936ENSMMOG00000014292rpa19982.699Mola_mola
ENSORLG00015013982rpa19862.333ENSMMOG00000010868RPA19862.333Mola_mola
ENSORLG00015013982rpa19962.908ENSMODG00000010549RPA19962.908Monodelphis_domestica
ENSORLG00015013982rpa19986.913ENSMALG00000011453rpa19986.913Monopterus_albus
ENSORLG00015013982rpa19969.731ENSMALG00000001208RPA18869.731Monopterus_albus
ENSORLG00015013982rpa19963.562MGP_CAROLIEiJ_G0016734Rpa19963.725Mus_caroli
ENSORLG00015013982rpa19962.723ENSMUSG00000000751Rpa19962.723Mus_musculus
ENSORLG00015013982rpa19963.518MGP_PahariEiJ_G0017871Rpa19963.681Mus_pahari
ENSORLG00015013982rpa19962.621MGP_SPRETEiJ_G0017577Rpa19962.621Mus_spretus
ENSORLG00015013982rpa19961.866ENSMPUG00000013119RPA19961.866Mustela_putorius_furo
ENSORLG00015013982rpa19962.500ENSMLUG00000006113RPA19962.500Myotis_lucifugus
ENSORLG00015013982rpa19763.529ENSNGAG00000004522Rpa19563.529Nannospalax_galili
ENSORLG00015013982rpa19859.832ENSNBRG00000009672RPA19759.832Neolamprologus_brichardi
ENSORLG00015013982rpa19584.656ENSNBRG00000020595rpa19984.656Neolamprologus_brichardi
ENSORLG00015013982rpa19962.927ENSNLEG00000017149RPA19963.072Nomascus_leucogenys
ENSORLG00015013982rpa19655.424ENSMEUG00000006714RPA19755.424Notamacropus_eugenii
ENSORLG00015013982rpa19662.647ENSODEG00000009038RPA19662.647Octodon_degus
ENSORLG00015013982rpa19984.124ENSONIG00000013135rpa19984.124Oreochromis_niloticus
ENSORLG00015013982rpa19863.787ENSOANG00000010880RPA19963.953Ornithorhynchus_anatinus
ENSORLG00015013982rpa19960.781ENSOCUG00000001504RPA19960.781Oryctolagus_cuniculus
ENSORLG00015013982rpa110099.498ENSORLG00000004856rpa110099.498Oryzias_latipes
ENSORLG00015013982rpa19957.846ENSORLG00000003368RPA19957.846Oryzias_latipes
ENSORLG00015013982rpa1100100.000ENSORLG00020008980rpa1100100.000Oryzias_latipes_hni
ENSORLG00015013982rpa19955.438ENSORLG00020015284RPA19955.438Oryzias_latipes_hni
ENSORLG00015013982rpa110091.152ENSOMEG00000004704rpa110091.152Oryzias_melastigma
ENSORLG00015013982rpa19560.627ENSOMEG00000011040RPA19960.627Oryzias_melastigma
ENSORLG00015013982rpa17674.317ENSOGAG00000029379-9974.317Otolemur_garnettii
ENSORLG00015013982rpa19963.399ENSOGAG00000005581-9963.399Otolemur_garnettii
ENSORLG00015013982rpa19962.623ENSOARG00000014479RPA19963.115Ovis_aries
ENSORLG00015013982rpa19963.089ENSPPAG00000039680RPA19963.235Pan_paniscus
ENSORLG00015013982rpa19961.601ENSPPRG00000011807RPA19961.601Panthera_pardus
ENSORLG00015013982rpa19961.601ENSPTIG00000007898RPA19961.601Panthera_tigris_altaica
ENSORLG00015013982rpa19963.415ENSPTRG00000008539RPA19963.562Pan_troglodytes
ENSORLG00015013982rpa19962.866ENSPANG00000024592RPA19963.339Papio_anubis
ENSORLG00015013982rpa19477.972ENSPKIG00000008053rpa19874.917Paramormyrops_kingsleyae
ENSORLG00015013982rpa19662.944ENSPSIG00000015617RPA19862.944Pelodiscus_sinensis
ENSORLG00015013982rpa19979.229ENSPMGG00000011589rpa19979.229Periophthalmus_magnuspinnatus
ENSORLG00015013982rpa19960.561ENSPMGG00000000543RPA19962.366Periophthalmus_magnuspinnatus
ENSORLG00015013982rpa19965.025ENSPEMG00000021061Rpa19965.025Peromyscus_maniculatus_bairdii
ENSORLG00015013982rpa19962.745ENSPCIG00000019049RPA19963.132Phascolarctos_cinereus
ENSORLG00015013982rpa19984.615ENSPFOG00000003987rpa19984.615Poecilia_formosa
ENSORLG00015013982rpa19984.448ENSPLAG00000004984rpa19984.448Poecilia_latipinna
ENSORLG00015013982rpa19459.223ENSPLAG00000008844-9659.223Poecilia_latipinna
ENSORLG00015013982rpa19984.783ENSPMEG00000020602rpa19984.783Poecilia_mexicana
ENSORLG00015013982rpa19458.862ENSPMEG00000003627-9658.738Poecilia_mexicana
ENSORLG00015013982rpa19377.460ENSPREG00000010174rpa19577.321Poecilia_reticulata
ENSORLG00015013982rpa19571.076ENSPREG00000010119RPA19371.807Poecilia_reticulata
ENSORLG00015013982rpa19963.830ENSPCOG00000001799RPA19963.830Propithecus_coquereli
ENSORLG00015013982rpa110061.138ENSPVAG00000002149RPA19961.138Pteropus_vampyrus
ENSORLG00015013982rpa19960.630ENSPNYG00000024165RPA19960.630Pundamilia_nyererei
ENSORLG00015013982rpa19986.144ENSPNYG00000016316rpa19986.144Pundamilia_nyererei
ENSORLG00015013982rpa19969.205ENSPNAG00000008599rpa19966.612Pygocentrus_nattereri
ENSORLG00015013982rpa19668.932ENSRNOG00000003123Rpa19964.803Rattus_norvegicus
ENSORLG00015013982rpa19963.192ENSRBIG00000036587RPA19963.192Rhinopithecus_bieti
ENSORLG00015013982rpa19958.497ENSRROG00000043278RPA19958.497Rhinopithecus_roxellana
ENSORLG00015013982rpa19631.491YAR007CRFA19531.491Saccharomyces_cerevisiae
ENSORLG00015013982rpa19164.043ENSSBOG00000030233RPA19764.464Saimiri_boliviensis_boliviensis
ENSORLG00015013982rpa19962.131ENSSHAG00000007969RPA19862.848Sarcophilus_harrisii
ENSORLG00015013982rpa19979.833ENSSFOG00015005362rpa19279.833Scleropages_formosus
ENSORLG00015013982rpa19956.884ENSSMAG00000019746RPA19956.884Scophthalmus_maximus
ENSORLG00015013982rpa19272.390ENSSDUG00000016358RPA18272.311Seriola_dumerili
ENSORLG00015013982rpa19986.789ENSSDUG00000011949rpa19986.789Seriola_dumerili
ENSORLG00015013982rpa19271.926ENSSLDG00000020784RPA18171.854Seriola_lalandi_dorsalis
ENSORLG00015013982rpa19986.789ENSSLDG00000011806rpa19986.789Seriola_lalandi_dorsalis
ENSORLG00015013982rpa18765.625ENSSARG00000007506RPA18354.871Sorex_araneus
ENSORLG00015013982rpa19661.433ENSSPUG00000007223RPA19861.433Sphenodon_punctatus
ENSORLG00015013982rpa19963.959ENSSPAG00000011165RPA19863.959Stegastes_partitus
ENSORLG00015013982rpa19986.789ENSSPAG00000009903rpa19986.789Stegastes_partitus
ENSORLG00015013982rpa19963.545ENSSSCG00000017822RPA19963.545Sus_scrofa
ENSORLG00015013982rpa19960.591ENSTGUG00000005775RPA19960.591Taeniopygia_guttata
ENSORLG00015013982rpa110080.634ENSTRUG00000003616rpa19980.634Takifugu_rubripes
ENSORLG00015013982rpa19970.093ENSTRUG00000000405RPA18669.704Takifugu_rubripes
ENSORLG00015013982rpa19981.414ENSTNIG00000016199rpa19981.579Tetraodon_nigroviridis
ENSORLG00015013982rpa17371.071ENSTBEG00000002709RPA17371.071Tupaia_belangeri
ENSORLG00015013982rpa19962.623ENSTTRG00000001169RPA19962.623Tursiops_truncatus
ENSORLG00015013982rpa18673.077ENSUAMG00000015676RPA19573.077Ursus_americanus
ENSORLG00015013982rpa19962.500ENSUMAG00000009328RPA19962.500Ursus_maritimus
ENSORLG00015013982rpa19961.221ENSVPAG00000009443RPA19961.221Vicugna_pacos
ENSORLG00015013982rpa19962.969ENSVVUG00000021715RPA19963.622Vulpes_vulpes
ENSORLG00015013982rpa19965.147ENSXETG00000013538rpa19967.221Xenopus_tropicalis
ENSORLG00015013982rpa19562.697ENSXCOG00000009899-9962.697Xiphophorus_couchianus
ENSORLG00015013982rpa19383.483ENSXCOG00000010068rpa19483.483Xiphophorus_couchianus
ENSORLG00015013982rpa19471.076ENSXMAG00000010333RPA18771.076Xiphophorus_maculatus
ENSORLG00015013982rpa19982.943ENSXMAG00000004102rpa19983.094Xiphophorus_maculatus

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