EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015014094 (Gene tree)
Gene ID: -
Gene Symbol: tdrkh
Alias: -
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 7946 bases
Position: chr19:22843223-22851168
Accession: ZDB-GENE-050327-81
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015013135	KH_1	PF00013.29	3.5e-16	1	1
ENSORLP00015013153	KH_1	PF00013.29	1.4e-15	1	1
ENSORLP00015013153	TUDOR	PF00567.24	8.1e-26	1	1
ENSORLP00015013135	TUDOR	PF00567.24	8.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015020482	-	1572	-	ENSORLP00015013153	523 (aa)	-	-
ENSORLT00015020503	-	1611	-	ENSORLP00015013135	536 (aa)	-	-

Gene Model

Click here to download ENSORLG00015014094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015014094's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015014094	tdrkh	97	71.810	ENSAPOG00000012653	tdrkh	100	68.280	Acanthochromis_polyacanthus
ENSORLG00015014094	tdrkh	97	68.843	ENSACIG00000010318	tdrkh	99	68.843	Amphilophus_citrinellus
ENSORLG00015014094	tdrkh	97	71.429	ENSAOCG00000020623	tdrkh	100	68.280	Amphiprion_ocellaris
ENSORLG00015014094	tdrkh	99	67.563	ENSAPEG00000018388	tdrkh	100	68.100	Amphiprion_percula
ENSORLG00015014094	tdrkh	99	66.727	ENSATEG00000023809	tdrkh	100	66.727	Anabas_testudineus
ENSORLG00015014094	tdrkh	99	65.642	ENSACLG00000003017	tdrkh	100	65.642	Astatotilapia_calliptera
ENSORLG00015014094	tdrkh	97	60.409	ENSAMXG00000011664	tdrkh	91	60.561	Astyanax_mexicanus
ENSORLG00015014094	tdrkh	97	62.157	ENSCSEG00000002894	tdrkh	96	63.755	Cynoglossus_semilaevis
ENSORLG00015014094	tdrkh	61	77.660	ENSCVAG00000020347	tdrkh	74	77.660	Cyprinodon_variegatus
ENSORLG00015014094	tdrkh	96	60.075	ENSDARG00000053474	tdrkh	100	52.804	Danio_rerio
ENSORLG00015014094	tdrkh	99	60.286	ENSELUG00000024537	tdrkh	94	60.286	Esox_lucius
ENSORLG00015014094	tdrkh	96	68.105	ENSFHEG00000003544	tdrkh	97	68.105	Fundulus_heteroclitus
ENSORLG00015014094	tdrkh	96	62.524	ENSGMOG00000009304	tdrkh	91	62.524	Gadus_morhua
ENSORLG00015014094	tdrkh	96	64.815	ENSGAFG00000010754	tdrkh	97	64.815	Gambusia_affinis
ENSORLG00015014094	tdrkh	99	66.667	ENSGACG00000015258	tdrkh	94	66.667	Gasterosteus_aculeatus
ENSORLG00015014094	tdrkh	99	65.461	ENSHBUG00000017609	tdrkh	100	65.461	Haplochromis_burtoni
ENSORLG00015014094	tdrkh	98	57.685	ENSIPUG00000009673	tdrkh	97	57.934	Ictalurus_punctatus
ENSORLG00015014094	tdrkh	96	67.978	ENSKMAG00000016638	tdrkh	90	68.914	Kryptolebias_marmoratus
ENSORLG00015014094	tdrkh	96	69.646	ENSLBEG00000027323	tdrkh	96	69.517	Labrus_bergylta
ENSORLG00015014094	tdrkh	93	50.098	ENSLOCG00000011381	tdrkh	95	51.233	Lepisosteus_oculatus
ENSORLG00015014094	tdrkh	99	66.184	ENSMAMG00000020343	tdrkh	100	66.184	Mastacembelus_armatus
ENSORLG00015014094	tdrkh	99	65.642	ENSMZEG00005006755	tdrkh	100	65.642	Maylandia_zebra
ENSORLG00015014094	tdrkh	97	68.691	ENSMMOG00000020663	tdrkh	90	68.691	Mola_mola
ENSORLG00015014094	tdrkh	99	65.185	ENSMALG00000015401	tdrkh	100	65.185	Monopterus_albus
ENSORLG00015014094	tdrkh	99	66.852	ENSNBRG00000023815	tdrkh	100	66.852	Neolamprologus_brichardi
ENSORLG00015014094	tdrkh	96	96.169	ENSORLG00000029204	tdrkh	96	96.169	Oryzias_latipes
ENSORLG00015014094	tdrkh	96	94.892	ENSORLG00020016168	tdrkh	99	94.778	Oryzias_latipes_hni
ENSORLG00015014094	tdrkh	96	88.314	ENSOMEG00000015063	tdrkh	89	88.314	Oryzias_melastigma
ENSORLG00015014094	tdrkh	99	56.058	ENSPKIG00000017597	tdrkh	97	56.932	Paramormyrops_kingsleyae
ENSORLG00015014094	tdrkh	96	67.194	ENSPMGG00000019362	tdrkh	94	66.926	Periophthalmus_magnuspinnatus
ENSORLG00015014094	tdrkh	96	65.226	ENSPFOG00000013032	tdrkh	91	65.226	Poecilia_formosa
ENSORLG00015014094	tdrkh	96	65.414	ENSPLAG00000004193	tdrkh	97	65.414	Poecilia_latipinna
ENSORLG00015014094	tdrkh	96	65.226	ENSPMEG00000016502	tdrkh	97	65.226	Poecilia_mexicana
ENSORLG00015014094	tdrkh	97	65.185	ENSPREG00000004213	tdrkh	92	63.433	Poecilia_reticulata
ENSORLG00015014094	tdrkh	97	68.343	ENSPNYG00000022818	tdrkh	97	68.343	Pundamilia_nyererei
ENSORLG00015014094	tdrkh	99	55.835	ENSPNAG00000008783	tdrkh	94	55.835	Pygocentrus_nattereri
ENSORLG00015014094	tdrkh	99	52.962	ENSSFOG00015001048	tdrkh	100	52.783	Scleropages_formosus
ENSORLG00015014094	tdrkh	97	68.819	ENSSMAG00000001532	tdrkh	100	66.487	Scophthalmus_maximus
ENSORLG00015014094	tdrkh	99	65.780	ENSSDUG00000013393	tdrkh	99	68.053	Seriola_dumerili
ENSORLG00015014094	tdrkh	99	65.603	ENSSLDG00000017418	tdrkh	100	65.780	Seriola_lalandi_dorsalis
ENSORLG00015014094	tdrkh	96	72.171	ENSSPAG00000006435	tdrkh	92	72.171	Stegastes_partitus
ENSORLG00015014094	tdrkh	96	64.839	ENSTRUG00000006644	tdrkh	97	64.839	Takifugu_rubripes
ENSORLG00015014094	tdrkh	99	59.717	ENSTNIG00000003157	tdrkh	97	62.226	Tetraodon_nigroviridis
ENSORLG00015014094	tdrkh	81	73.684	ENSXCOG00000016972	tdrkh	99	73.684	Xiphophorus_couchianus
ENSORLG00015014094	tdrkh	99	62.681	ENSXMAG00000014756	tdrkh	100	62.681	Xiphophorus_maculatus