EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015014183 (Gene tree)
Gene ID: -
Gene Symbol: bms1
Alias: -
Full Name: BMS1 ribosome biogenesis factor
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 12296 bases
Position: chr19:22829338-22841633
Accession: ZDB-GENE-060720-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015013279	AARP2CN	PF08142.12	3e-32	1	1
ENSORLP00015030431	AARP2CN	PF08142.12	8.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015032988	-	1885	-	ENSORLP00015013279	585 (aa)	-	-
ENSORLT00015020567	-	3582	-	ENSORLP00015030431	1193 (aa)	-	-

Gene Model

Click here to download ENSORLG00015014183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015014183's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015014183	bms1	92	68.506	ENSG00000165733	BMS1	82	73.649	Homo_sapiens
ENSORLG00015014183	bms1	62	92.033	ENSAPOG00000020157	-	98	92.033	Acanthochromis_polyacanthus
ENSORLG00015014183	bms1	51	91.333	ENSAPOG00000016107	-	80	91.333	Acanthochromis_polyacanthus
ENSORLG00015014183	bms1	87	77.737	ENSAPOG00000002296	bms1	99	77.737	Acanthochromis_polyacanthus
ENSORLG00015014183	bms1	87	68.411	ENSAMEG00000016834	BMS1	88	68.720	Ailuropoda_melanoleuca
ENSORLG00015014183	bms1	99	76.499	ENSACIG00000002588	bms1	99	76.214	Amphilophus_citrinellus
ENSORLG00015014183	bms1	99	79.636	ENSAOCG00000018088	bms1	99	79.419	Amphiprion_ocellaris
ENSORLG00015014183	bms1	100	78.751	ENSAPEG00000014673	bms1	100	78.618	Amphiprion_percula
ENSORLG00015014183	bms1	99	78.029	ENSATEG00000023465	bms1	99	78.716	Anabas_testudineus
ENSORLG00015014183	bms1	95	61.075	ENSAPLG00000003759	BMS1	87	70.018	Anas_platyrhynchos
ENSORLG00015014183	bms1	98	64.060	ENSACAG00000004537	-	82	72.062	Anolis_carolinensis
ENSORLG00015014183	bms1	88	67.054	ENSANAG00000023432	BMS1	87	68.730	Aotus_nancymaae
ENSORLG00015014183	bms1	99	76.365	ENSACLG00000001294	bms1	99	75.944	Astatotilapia_calliptera
ENSORLG00015014183	bms1	87	70.992	ENSAMXG00000011236	bms1	91	75.321	Astyanax_mexicanus
ENSORLG00015014183	bms1	92	68.404	ENSBTAG00000012878	BMS1	87	69.919	Bos_taurus
ENSORLG00015014183	bms1	84	53.056	WBGene00022021	Y61A9LA.10	94	53.056	Caenorhabditis_elegans
ENSORLG00015014183	bms1	92	69.318	ENSCJAG00000021705	BMS1	87	69.381	Callithrix_jacchus
ENSORLG00015014183	bms1	93	69.355	ENSCAFG00000007114	BMS1	87	68.285	Canis_familiaris
ENSORLG00015014183	bms1	93	69.355	ENSCAFG00020025282	BMS1	87	68.285	Canis_lupus_dingo
ENSORLG00015014183	bms1	92	68.404	ENSCHIG00000023251	BMS1	82	73.138	Capra_hircus
ENSORLG00015014183	bms1	99	57.496	ENSCAPG00000008652	BMS1	82	71.332	Cavia_aperea
ENSORLG00015014183	bms1	99	61.008	ENSCPOG00000000502	BMS1	83	72.912	Cavia_porcellus
ENSORLG00015014183	bms1	99	50.585	ENSCCAG00000024969	-	87	58.553	Cebus_capucinus
ENSORLG00015014183	bms1	70	58.261	ENSCATG00000008695	-	70	58.969	Cercocebus_atys
ENSORLG00015014183	bms1	92	69.044	ENSCATG00000030625	-	85	71.573	Cercocebus_atys
ENSORLG00015014183	bms1	99	61.972	ENSCLAG00000002446	BMS1	83	74.041	Chinchilla_lanigera
ENSORLG00015014183	bms1	88	67.311	ENSCSAG00000011118	BMS1	87	69.268	Chlorocebus_sabaeus
ENSORLG00015014183	bms1	99	63.538	ENSCHOG00000011055	BMS1	87	68.241	Choloepus_hoffmanni
ENSORLG00015014183	bms1	98	66.294	ENSCPBG00000025581	BMS1	86	68.548	Chrysemys_picta_bellii
ENSORLG00015014183	bms1	82	62.406	ENSCING00000003181	-	97	60.095	Ciona_intestinalis
ENSORLG00015014183	bms1	79	49.491	ENSCSAVG00000004113	-	87	54.023	Ciona_savignyi
ENSORLG00015014183	bms1	87	67.767	ENSCANG00000011609	BMS1	87	69.756	Colobus_angolensis_palliatus
ENSORLG00015014183	bms1	98	62.638	ENSCGRG00001019461	Bms1	89	67.360	Cricetulus_griseus_chok1gshd
ENSORLG00015014183	bms1	98	62.638	ENSCGRG00000009016	Bms1	89	67.360	Cricetulus_griseus_crigri
ENSORLG00015014183	bms1	99	76.740	ENSCSEG00000002469	bms1	99	76.404	Cynoglossus_semilaevis
ENSORLG00015014183	bms1	99	78.760	ENSCVAG00000008371	bms1	52	83.897	Cyprinodon_variegatus
ENSORLG00015014183	bms1	100	71.692	ENSDARG00000054154	bms1	90	75.889	Danio_rerio
ENSORLG00015014183	bms1	99	60.896	ENSDNOG00000015761	BMS1	87	68.616	Dasypus_novemcinctus
ENSORLG00015014183	bms1	87	67.315	ENSDORG00000002982	Bms1	88	68.447	Dipodomys_ordii
ENSORLG00015014183	bms1	85	57.809	FBgn0036686	CG7728	95	55.269	Drosophila_melanogaster
ENSORLG00015014183	bms1	88	64.990	ENSETEG00000009554	BMS1	78	66.964	Echinops_telfairi
ENSORLG00015014183	bms1	99	60.810	ENSEASG00005006894	BMS1	88	68.659	Equus_asinus_asinus
ENSORLG00015014183	bms1	99	62.152	ENSECAG00000001358	BMS1	88	68.498	Equus_caballus
ENSORLG00015014183	bms1	99	71.117	ENSELUG00000001756	bms1	74	88.022	Esox_lucius
ENSORLG00015014183	bms1	99	62.181	ENSFCAG00000011220	BMS1	87	68.893	Felis_catus
ENSORLG00015014183	bms1	94	68.379	ENSFALG00000006882	BMS1	86	69.342	Ficedula_albicollis
ENSORLG00015014183	bms1	99	60.678	ENSFDAG00000001422	BMS1	88	67.427	Fukomys_damarensis
ENSORLG00015014183	bms1	99	78.770	ENSFHEG00000003367	bms1	99	78.624	Fundulus_heteroclitus
ENSORLG00015014183	bms1	99	70.941	ENSGMOG00000000718	bms1	97	76.849	Gadus_morhua
ENSORLG00015014183	bms1	93	69.094	ENSGALG00000002624	BMS1	87	69.094	Gallus_gallus
ENSORLG00015014183	bms1	72	87.173	ENSGAFG00000009067	bms1	84	86.697	Gambusia_affinis
ENSORLG00015014183	bms1	96	80.346	ENSGACG00000015334	bms1	91	80.346	Gasterosteus_aculeatus
ENSORLG00015014183	bms1	98	65.299	ENSGAGG00000003467	BMS1	89	68.109	Gopherus_agassizii
ENSORLG00015014183	bms1	99	76.447	ENSHBUG00000022628	bms1	52	81.029	Haplochromis_burtoni
ENSORLG00015014183	bms1	99	76.617	ENSHCOG00000017604	bms1	52	81.699	Hippocampus_comes
ENSORLG00015014183	bms1	99	69.664	ENSIPUG00000017855	bms1	77	83.696	Ictalurus_punctatus
ENSORLG00015014183	bms1	87	68.350	ENSSTOG00000015063	BMS1	88	68.245	Ictidomys_tridecemlineatus
ENSORLG00015014183	bms1	94	67.601	ENSJJAG00000017328	Bms1	88	68.689	Jaculus_jaculus
ENSORLG00015014183	bms1	91	76.809	ENSKMAG00000021982	bms1	64	76.938	Kryptolebias_marmoratus
ENSORLG00015014183	bms1	92	75.919	ENSLBEG00000028208	bms1	99	75.851	Labrus_bergylta
ENSORLG00015014183	bms1	99	66.478	ENSLACG00000001600	BMS1	90	66.344	Latimeria_chalumnae
ENSORLG00015014183	bms1	97	70.132	ENSLOCG00000012914	bms1	99	70.000	Lepisosteus_oculatus
ENSORLG00015014183	bms1	93	68.130	ENSLAFG00000006250	BMS1	82	72.422	Loxodonta_africana
ENSORLG00015014183	bms1	87	67.054	ENSMFAG00000037771	BMS1	95	67.653	Macaca_fascicularis
ENSORLG00015014183	bms1	96	52.398	ENSMMUG00000007426	-	78	64.471	Macaca_mulatta
ENSORLG00015014183	bms1	87	52.918	ENSMLEG00000029084	-	71	58.225	Mandrillus_leucophaeus
ENSORLG00015014183	bms1	99	76.206	ENSMAMG00000020855	bms1	99	75.772	Mastacembelus_armatus
ENSORLG00015014183	bms1	99	76.284	ENSMZEG00005005663	bms1	99	75.862	Maylandia_zebra
ENSORLG00015014183	bms1	89	68.770	ENSMGAG00000001170	BMS1	86	68.770	Meleagris_gallopavo
ENSORLG00015014183	bms1	98	62.342	ENSMAUG00000002195	Bms1	89	67.680	Mesocricetus_auratus
ENSORLG00015014183	bms1	93	68.608	ENSMICG00000009977	BMS1	87	68.164	Microcebus_murinus
ENSORLG00015014183	bms1	92	67.846	ENSMOCG00000002038	Bms1	88	67.472	Microtus_ochrogaster
ENSORLG00015014183	bms1	99	77.925	ENSMMOG00000000977	bms1	99	78.174	Mola_mola
ENSORLG00015014183	bms1	99	64.505	ENSMODG00000001177	BMS1	81	73.874	Monodelphis_domestica
ENSORLG00015014183	bms1	99	76.642	ENSMALG00000009680	bms1	99	76.380	Monopterus_albus
ENSORLG00015014183	bms1	73	77.354	MGP_CAROLIEiJ_G0028785	-	76	76.049	Mus_caroli
ENSORLG00015014183	bms1	98	61.430	ENSMUSG00000030138	Bms1	88	66.828	Mus_musculus
ENSORLG00015014183	bms1	98	61.242	MGP_SPRETEiJ_G0029816	Bms1	88	66.613	Mus_spretus
ENSORLG00015014183	bms1	93	69.790	ENSMPUG00000017276	BMS1	88	68.982	Mustela_putorius_furo
ENSORLG00015014183	bms1	99	62.187	ENSMLUG00000003260	BMS1	88	68.352	Myotis_lucifugus
ENSORLG00015014183	bms1	99	58.421	ENSNGAG00000015258	Bms1	86	69.156	Nannospalax_galili
ENSORLG00015014183	bms1	75	86.986	ENSNBRG00000023627	bms1	98	86.986	Neolamprologus_brichardi
ENSORLG00015014183	bms1	87	66.342	ENSNLEG00000015791	BMS1	85	68.776	Nomascus_leucogenys
ENSORLG00015014183	bms1	84	76.904	ENSOPRG00000005195	BMS1	80	76.961	Ochotona_princeps
ENSORLG00015014183	bms1	99	61.946	ENSODEG00000005554	BMS1	83	74.041	Octodon_degus
ENSORLG00015014183	bms1	99	77.325	ENSONIG00000007227	bms1	52	82.126	Oreochromis_niloticus
ENSORLG00015014183	bms1	99	60.613	ENSOANG00000000662	-	82	73.349	Ornithorhynchus_anatinus
ENSORLG00015014183	bms1	88	68.593	ENSOCUG00000005354	BMS1	87	69.544	Oryctolagus_cuniculus
ENSORLG00015014183	bms1	98	97.727	ENSORLG00000014655	bms1	100	94.166	Oryzias_latipes
ENSORLG00015014183	bms1	100	95.764	ENSORLG00020016246	bms1	100	95.764	Oryzias_latipes_hni
ENSORLG00015014183	bms1	92	88.268	ENSOMEG00000015042	bms1	100	85.796	Oryzias_melastigma
ENSORLG00015014183	bms1	99	61.372	ENSOGAG00000006511	BMS1	87	68.558	Otolemur_garnettii
ENSORLG00015014183	bms1	92	68.567	ENSOARG00000003900	BMS1	82	72.483	Ovis_aries
ENSORLG00015014183	bms1	92	67.515	ENSPPAG00000027837	BMS1	82	73.423	Pan_paniscus
ENSORLG00015014183	bms1	99	61.580	ENSPPRG00000001311	BMS1	87	68.515	Panthera_pardus
ENSORLG00015014183	bms1	99	61.176	ENSPTIG00000009652	BMS1	87	67.969	Panthera_tigris_altaica
ENSORLG00015014183	bms1	92	68.882	ENSPTRG00000002441	BMS1	82	73.423	Pan_troglodytes
ENSORLG00015014183	bms1	95	73.726	ENSPKIG00000008165	bms1	88	75.676	Paramormyrops_kingsleyae
ENSORLG00015014183	bms1	98	68.350	ENSPSIG00000006481	BMS1	86	68.872	Pelodiscus_sinensis
ENSORLG00015014183	bms1	68	89.975	ENSPMGG00000012075	bms1	99	88.670	Periophthalmus_magnuspinnatus
ENSORLG00015014183	bms1	86	66.863	ENSPEMG00000022467	Bms1	87	66.860	Peromyscus_maniculatus_bairdii
ENSORLG00015014183	bms1	94	67.747	ENSPCIG00000001339	BMS1	81	73.198	Phascolarctos_cinereus
ENSORLG00015014183	bms1	89	77.989	ENSPFOG00000015180	bms1	99	75.527	Poecilia_formosa
ENSORLG00015014183	bms1	89	78.137	ENSPLAG00000007150	bms1	90	77.449	Poecilia_latipinna
ENSORLG00015014183	bms1	99	78.571	ENSPMEG00000023176	bms1	94	77.933	Poecilia_mexicana
ENSORLG00015014183	bms1	99	77.409	ENSPREG00000002695	bms1	52	83.955	Poecilia_reticulata
ENSORLG00015014183	bms1	87	67.829	ENSPPYG00000002836	-	79	67.379	Pongo_abelii
ENSORLG00015014183	bms1	88	65.444	ENSPCAG00000014528	BMS1	70	73.624	Procavia_capensis
ENSORLG00015014183	bms1	88	65.733	ENSPCOG00000023834	-	86	68.433	Propithecus_coquereli
ENSORLG00015014183	bms1	99	61.159	ENSPVAG00000000725	BMS1	83	72.172	Pteropus_vampyrus
ENSORLG00015014183	bms1	99	77.087	ENSPNYG00000018866	bms1	99	77.202	Pundamilia_nyererei
ENSORLG00015014183	bms1	92	69.686	ENSPNAG00000000676	bms1	90	77.796	Pygocentrus_nattereri
ENSORLG00015014183	bms1	87	64.272	ENSRROG00000040101	BMS1	85	71.894	Rhinopithecus_roxellana
ENSORLG00015014183	bms1	75	52.062	YPL217C	-	81	47.380	Saccharomyces_cerevisiae
ENSORLG00015014183	bms1	88	66.473	ENSSBOG00000035778	BMS1	87	69.168	Saimiri_boliviensis_boliviensis
ENSORLG00015014183	bms1	99	63.636	ENSSHAG00000005062	BMS1	81	73.274	Sarcophilus_harrisii
ENSORLG00015014183	bms1	99	77.386	ENSSMAG00000019966	bms1	99	76.905	Scophthalmus_maximus
ENSORLG00015014183	bms1	100	79.207	ENSSDUG00000016875	bms1	90	79.566	Seriola_dumerili
ENSORLG00015014183	bms1	92	77.345	ENSSLDG00000015199	bms1	100	78.732	Seriola_lalandi_dorsalis
ENSORLG00015014183	bms1	61	65.992	ENSSARG00000014407	BMS1	67	75.728	Sorex_araneus
ENSORLG00015014183	bms1	96	67.742	ENSSPUG00000014454	BMS1	87	68.548	Sphenodon_punctatus
ENSORLG00015014183	bms1	88	67.505	ENSSSCG00000010198	BMS1	87	70.081	Sus_scrofa
ENSORLG00015014183	bms1	97	68.760	ENSTGUG00000006302	-	87	68.760	Taeniopygia_guttata
ENSORLG00015014183	bms1	99	71.878	ENSTRUG00000008028	bms1	52	75.570	Takifugu_rubripes
ENSORLG00015014183	bms1	97	74.560	ENSTNIG00000006216	bms1	84	79.233	Tetraodon_nigroviridis
ENSORLG00015014183	bms1	63	69.728	ENSTBEG00000001673	-	63	69.000	Tupaia_belangeri
ENSORLG00015014183	bms1	93	69.593	ENSTTRG00000007983	BMS1	79	78.141	Tursiops_truncatus
ENSORLG00015014183	bms1	87	67.899	ENSUAMG00000023996	BMS1	88	68.530	Ursus_americanus
ENSORLG00015014183	bms1	87	67.899	ENSUMAG00000016523	BMS1	88	68.659	Ursus_maritimus
ENSORLG00015014183	bms1	68	74.944	ENSVPAG00000007477	BMS1	79	74.725	Vicugna_pacos
ENSORLG00015014183	bms1	93	69.355	ENSVVUG00000021305	BMS1	87	68.285	Vulpes_vulpes
ENSORLG00015014183	bms1	98	62.160	ENSXETG00000008158	bms1	89	65.377	Xenopus_tropicalis
ENSORLG00015014183	bms1	99	79.040	ENSXCOG00000000506	bms1	99	87.560	Xiphophorus_couchianus
ENSORLG00015014183	bms1	99	77.575	ENSXMAG00000014236	bms1	99	77.933	Xiphophorus_maculatus