EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015014384 (Gene tree)
Gene ID: -
Gene Symbol: srsf1a
Alias: -
Full Name: serine/arginine-rich splicing factor 1a
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 2370 bases
Position: chr13:10579634-10582003
Accession: ZDB-GENE-040426-1950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015013480	RRM_1	PF00076.22	2.6e-32	1	2
ENSORLP00015013480	RRM_1	PF00076.22	2.6e-32	2	2
ENSORLP00015013488	RRM_1	PF00076.22	3.1e-32	1	2
ENSORLP00015013488	RRM_1	PF00076.22	3.1e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015020871	-	696	-	ENSORLP00015013480	231 (aa)	-	-
ENSORLT00015020889	-	1172	-	ENSORLP00015013488	245 (aa)	-	-

Gene Model

Click here to download ENSORLG00015014384's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015014384's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015014384	srsf1a	78	68.333	ENSORLG00015004857	srsf9	74	68.333
ENSORLG00015014384	srsf1a	71	43.103	ENSORLG00015023075	srsf5	62	41.954
ENSORLG00015014384	srsf1a	83	87.113	ENSORLG00015015497	-	76	89.175
ENSORLG00015014384	srsf1a	68	43.889	ENSORLG00015001720	srsf5b	58	45.714
ENSORLG00015014384	srsf1a	92	34.375	ENSORLG00015007566	srsf4	98	35.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015014384	srsf1a	98	84.774	ENSG00000136450	SRSF1	94	93.443	Homo_sapiens
ENSORLG00015014384	srsf1a	100	99.184	ENSAPOG00000002748	-	100	99.184	Acanthochromis_polyacanthus
ENSORLG00015014384	srsf1a	83	89.005	ENSAPOG00000008542	-	80	88.442	Acanthochromis_polyacanthus
ENSORLG00015014384	srsf1a	83	89.005	ENSAMEG00000002635	SRSF1	77	89.529	Ailuropoda_melanoleuca
ENSORLG00015014384	srsf1a	100	99.567	ENSACIG00000008091	srsf1a	100	99.567	Amphilophus_citrinellus
ENSORLG00015014384	srsf1a	100	100.000	ENSAOCG00000010671	-	100	100.000	Amphiprion_ocellaris
ENSORLG00015014384	srsf1a	83	88.442	ENSAOCG00000000337	-	80	88.442	Amphiprion_ocellaris
ENSORLG00015014384	srsf1a	83	88.442	ENSAPEG00000023352	-	79	88.442	Amphiprion_percula
ENSORLG00015014384	srsf1a	100	100.000	ENSAPEG00000009915	-	100	100.000	Amphiprion_percula
ENSORLG00015014384	srsf1a	86	86.869	ENSATEG00000021567	-	92	83.784	Anabas_testudineus
ENSORLG00015014384	srsf1a	100	98.785	ENSATEG00000022403	-	100	98.785	Anabas_testudineus
ENSORLG00015014384	srsf1a	83	89.119	ENSACAG00000005542	-	78	91.192	Anolis_carolinensis
ENSORLG00015014384	srsf1a	84	67.526	ENSANAG00000025417	-	73	68.063	Aotus_nancymaae
ENSORLG00015014384	srsf1a	98	84.774	ENSANAG00000020583	-	93	91.176	Aotus_nancymaae
ENSORLG00015014384	srsf1a	83	86.869	ENSAMXG00000035996	srsf1a	79	88.889	Astyanax_mexicanus
ENSORLG00015014384	srsf1a	57	73.548	ENSAMXG00000024373	-	72	77.419	Astyanax_mexicanus
ENSORLG00015014384	srsf1a	98	84.774	ENSBTAG00000014766	SRSF1	88	86.547	Bos_taurus
ENSORLG00015014384	srsf1a	83	82.902	ENSCJAG00000008111	-	86	83.938	Callithrix_jacchus
ENSORLG00015014384	srsf1a	98	84.774	ENSCJAG00000041713	-	93	91.176	Callithrix_jacchus
ENSORLG00015014384	srsf1a	98	84.774	ENSCAFG00000017430	SRSF1	88	86.547	Canis_familiaris
ENSORLG00015014384	srsf1a	98	84.774	ENSCAFG00020025632	-	88	86.547	Canis_lupus_dingo
ENSORLG00015014384	srsf1a	83	90.155	ENSCHIG00000010787	SRSF1	78	92.228	Capra_hircus
ENSORLG00015014384	srsf1a	98	84.774	ENSTSYG00000013899	-	93	91.176	Carlito_syrichta
ENSORLG00015014384	srsf1a	98	84.774	ENSCPOG00000032681	-	88	86.547	Cavia_porcellus
ENSORLG00015014384	srsf1a	98	84.774	ENSCCAG00000029484	-	93	91.176	Cebus_capucinus
ENSORLG00015014384	srsf1a	98	84.774	ENSCATG00000042294	-	93	91.176	Cercocebus_atys
ENSORLG00015014384	srsf1a	98	84.774	ENSCLAG00000014707	-	88	86.547	Chinchilla_lanigera
ENSORLG00015014384	srsf1a	98	83.951	ENSCSAG00000005642	-	88	85.650	Chlorocebus_sabaeus
ENSORLG00015014384	srsf1a	83	90.155	ENSCHOG00000001899	SRSF1	78	92.228	Choloepus_hoffmanni
ENSORLG00015014384	srsf1a	98	84.362	ENSCPBG00000009851	-	88	86.099	Chrysemys_picta_bellii
ENSORLG00015014384	srsf1a	98	84.774	ENSCANG00000029726	-	93	91.176	Colobus_angolensis_palliatus
ENSORLG00015014384	srsf1a	98	84.774	ENSCGRG00001000670	Srsf1	88	86.547	Cricetulus_griseus_chok1gshd
ENSORLG00015014384	srsf1a	98	84.774	ENSCGRG00000005590	Srsf1	88	86.547	Cricetulus_griseus_crigri
ENSORLG00015014384	srsf1a	100	90.612	ENSCSEG00000014272	-	99	90.612	Cynoglossus_semilaevis
ENSORLG00015014384	srsf1a	82	82.212	ENSCSEG00000009973	-	79	82.212	Cynoglossus_semilaevis
ENSORLG00015014384	srsf1a	82	87.113	ENSCVAG00000005458	-	90	86.813	Cyprinodon_variegatus
ENSORLG00015014384	srsf1a	100	99.184	ENSCVAG00000018617	-	100	99.184	Cyprinodon_variegatus
ENSORLG00015014384	srsf1a	83	84.729	ENSDARG00000057691	srsf1a	99	85.864	Danio_rerio
ENSORLG00015014384	srsf1a	83	90.155	ENSDARG00000017843	srsf1b	79	92.228	Danio_rerio
ENSORLG00015014384	srsf1a	98	84.774	ENSDNOG00000011737	-	88	86.547	Dasypus_novemcinctus
ENSORLG00015014384	srsf1a	98	84.774	ENSDORG00000015082	Srsf1	88	86.547	Dipodomys_ordii
ENSORLG00015014384	srsf1a	77	90.000	ENSETEG00000005349	-	62	91.111	Echinops_telfairi
ENSORLG00015014384	srsf1a	98	84.774	ENSEASG00005002922	-	88	86.547	Equus_asinus_asinus
ENSORLG00015014384	srsf1a	83	90.155	ENSECAG00000016654	SRSF1	78	92.228	Equus_caballus
ENSORLG00015014384	srsf1a	77	91.111	ENSEEUG00000009255	-	62	92.222	Erinaceus_europaeus
ENSORLG00015014384	srsf1a	83	93.229	ENSELUG00000021646	srsf1a	76	93.750	Esox_lucius
ENSORLG00015014384	srsf1a	98	84.774	ENSFCAG00000002250	-	90	92.222	Felis_catus
ENSORLG00015014384	srsf1a	78	94.340	ENSFALG00000005062	-	93	66.949	Ficedula_albicollis
ENSORLG00015014384	srsf1a	98	84.774	ENSFDAG00000010646	-	88	86.547	Fukomys_damarensis
ENSORLG00015014384	srsf1a	100	99.134	ENSFHEG00000003174	srsf1a	100	99.134	Fundulus_heteroclitus
ENSORLG00015014384	srsf1a	85	89.286	ENSGMOG00000014787	-	80	88.482	Gadus_morhua
ENSORLG00015014384	srsf1a	83	89.637	ENSGALG00000005525	SRSF1	78	91.710	Gallus_gallus
ENSORLG00015014384	srsf1a	83	86.387	ENSGACG00000020621	srsf1b	78	85.864	Gasterosteus_aculeatus
ENSORLG00015014384	srsf1a	98	84.362	ENSGAGG00000022965	-	88	86.099	Gopherus_agassizii
ENSORLG00015014384	srsf1a	98	84.774	ENSGGOG00000004386	SRSF1	93	91.176	Gorilla_gorilla
ENSORLG00015014384	srsf1a	100	99.567	ENSHBUG00000016788	srsf1a	100	99.184	Haplochromis_burtoni
ENSORLG00015014384	srsf1a	70	89.634	ENSHGLG00000000669	-	76	92.073	Heterocephalus_glaber_female
ENSORLG00015014384	srsf1a	70	89.634	ENSHGLG00000000600	-	76	92.073	Heterocephalus_glaber_female
ENSORLG00015014384	srsf1a	98	84.774	ENSHGLG00100016906	-	88	86.547	Heterocephalus_glaber_male
ENSORLG00015014384	srsf1a	84	90.452	ENSHCOG00000018918	srsf1a	88	86.607	Hippocampus_comes
ENSORLG00015014384	srsf1a	84	86.567	ENSIPUG00000017039	srsf1a	80	88.557	Ictalurus_punctatus
ENSORLG00015014384	srsf1a	83	89.583	ENSIPUG00000008750	srsf1b	78	92.188	Ictalurus_punctatus
ENSORLG00015014384	srsf1a	98	84.774	ENSSTOG00000000243	-	95	88.021	Ictidomys_tridecemlineatus
ENSORLG00015014384	srsf1a	98	84.774	ENSJJAG00000000102	-	88	86.547	Jaculus_jaculus
ENSORLG00015014384	srsf1a	52	81.967	ENSJJAG00000014464	-	92	85.366	Jaculus_jaculus
ENSORLG00015014384	srsf1a	100	97.967	ENSKMAG00000019232	srsf1a	100	97.967	Kryptolebias_marmoratus
ENSORLG00015014384	srsf1a	83	80.102	ENSLBEG00000015294	-	79	81.633	Labrus_bergylta
ENSORLG00015014384	srsf1a	100	99.134	ENSLBEG00000020864	-	100	99.134	Labrus_bergylta
ENSORLG00015014384	srsf1a	83	90.104	ENSLACG00000014160	srsf1a	72	90.104	Latimeria_chalumnae
ENSORLG00015014384	srsf1a	83	89.062	ENSLOCG00000005994	srsf1a	78	92.188	Lepisosteus_oculatus
ENSORLG00015014384	srsf1a	83	90.155	ENSLAFG00000025743	SRSF1	78	92.228	Loxodonta_africana
ENSORLG00015014384	srsf1a	98	84.774	ENSMFAG00000040003	-	93	91.176	Macaca_fascicularis
ENSORLG00015014384	srsf1a	98	84.774	ENSMMUG00000004725	SRSF1	93	91.176	Macaca_mulatta
ENSORLG00015014384	srsf1a	98	81.893	ENSMMUG00000003260	-	93	89.583	Macaca_mulatta
ENSORLG00015014384	srsf1a	98	82.305	ENSMNEG00000015983	-	88	84.305	Macaca_nemestrina
ENSORLG00015014384	srsf1a	98	84.774	ENSMNEG00000027680	-	93	91.176	Macaca_nemestrina
ENSORLG00015014384	srsf1a	98	82.573	ENSMLEG00000015243	-	88	82.353	Mandrillus_leucophaeus
ENSORLG00015014384	srsf1a	83	90.155	ENSMLEG00000040509	SRSF1	78	92.228	Mandrillus_leucophaeus
ENSORLG00015014384	srsf1a	83	92.188	ENSMAMG00000019691	-	80	91.667	Mastacembelus_armatus
ENSORLG00015014384	srsf1a	100	99.592	ENSMAMG00000018454	-	100	99.592	Mastacembelus_armatus
ENSORLG00015014384	srsf1a	83	90.052	ENSMAMG00000019687	-	91	85.650	Mastacembelus_armatus
ENSORLG00015014384	srsf1a	98	84.774	ENSMAUG00000021845	Srsf1	88	86.547	Mesocricetus_auratus
ENSORLG00015014384	srsf1a	98	84.774	ENSMICG00000013639	-	93	91.176	Microcebus_murinus
ENSORLG00015014384	srsf1a	98	84.774	ENSMOCG00000001996	Srsf1	88	86.547	Microtus_ochrogaster
ENSORLG00015014384	srsf1a	100	98.701	ENSMMOG00000014354	srsf1a	100	98.701	Mola_mola
ENSORLG00015014384	srsf1a	77	90.608	ENSMODG00000014781	-	62	91.160	Monodelphis_domestica
ENSORLG00015014384	srsf1a	86	78.283	ENSMALG00000007763	-	77	82.199	Monopterus_albus
ENSORLG00015014384	srsf1a	88	96.744	ENSMALG00000017129	-	84	96.744	Monopterus_albus
ENSORLG00015014384	srsf1a	98	84.774	MGP_CAROLIEiJ_G0016943	Srsf1	90	92.222	Mus_caroli
ENSORLG00015014384	srsf1a	98	84.774	ENSMUSG00000018379	Srsf1	90	92.222	Mus_musculus
ENSORLG00015014384	srsf1a	98	84.774	MGP_PahariEiJ_G0018074	Srsf1	88	86.547	Mus_pahari
ENSORLG00015014384	srsf1a	98	84.774	MGP_SPRETEiJ_G0017790	Srsf1	90	92.222	Mus_spretus
ENSORLG00015014384	srsf1a	83	90.155	ENSMPUG00000015369	SRSF1	78	92.228	Mustela_putorius_furo
ENSORLG00015014384	srsf1a	85	87.817	ENSMLUG00000023995	-	77	87.435	Myotis_lucifugus
ENSORLG00015014384	srsf1a	83	90.155	ENSMLUG00000011040	SRSF1	78	92.228	Myotis_lucifugus
ENSORLG00015014384	srsf1a	83	90.155	ENSNGAG00000011395	Srsf1	78	92.228	Nannospalax_galili
ENSORLG00015014384	srsf1a	99	74.180	ENSNBRG00000008041	srsf1b	78	77.487	Neolamprologus_brichardi
ENSORLG00015014384	srsf1a	98	84.774	ENSNLEG00000008088	-	93	91.176	Nomascus_leucogenys
ENSORLG00015014384	srsf1a	52	86.992	ENSMEUG00000002783	-	98	87.097	Notamacropus_eugenii
ENSORLG00015014384	srsf1a	56	88.636	ENSOPRG00000001234	-	72	91.667	Ochotona_princeps
ENSORLG00015014384	srsf1a	98	84.774	ENSODEG00000011481	-	88	86.547	Octodon_degus
ENSORLG00015014384	srsf1a	84	91.282	ENSONIG00000004860	-	79	90.625	Oreochromis_niloticus
ENSORLG00015014384	srsf1a	100	99.184	ENSONIG00000013160	-	99	99.184	Oreochromis_niloticus
ENSORLG00015014384	srsf1a	99	63.415	ENSOCUG00000010894	-	75	72.487	Oryctolagus_cuniculus
ENSORLG00015014384	srsf1a	100	99.592	ENSORLG00000004580	srsf1a	100	99.592	Oryzias_latipes
ENSORLG00015014384	srsf1a	100	100.000	ENSORLG00020009456	srsf1a	100	100.000	Oryzias_latipes_hni
ENSORLG00015014384	srsf1a	92	97.788	ENSOMEG00000004106	srsf1a	93	97.788	Oryzias_melastigma
ENSORLG00015014384	srsf1a	87	90.686	ENSOGAG00000025950	-	78	92.228	Otolemur_garnettii
ENSORLG00015014384	srsf1a	83	89.005	ENSOARG00000008323	SRSF1	77	89.005	Ovis_aries
ENSORLG00015014384	srsf1a	98	84.774	ENSPPAG00000043403	-	93	91.176	Pan_paniscus
ENSORLG00015014384	srsf1a	98	84.774	ENSPPRG00000004238	-	90	92.222	Panthera_pardus
ENSORLG00015014384	srsf1a	98	84.774	ENSPTRG00000049077	SRSF1	93	91.176	Pan_troglodytes
ENSORLG00015014384	srsf1a	98	84.774	ENSPANG00000022305	-	93	91.176	Papio_anubis
ENSORLG00015014384	srsf1a	99	67.347	ENSPANG00000030275	-	89	64.889	Papio_anubis
ENSORLG00015014384	srsf1a	83	89.062	ENSPKIG00000012857	srsf1b	78	92.188	Paramormyrops_kingsleyae
ENSORLG00015014384	srsf1a	83	91.146	ENSPKIG00000007204	srsf1a	83	91.146	Paramormyrops_kingsleyae
ENSORLG00015014384	srsf1a	83	82.383	ENSPSIG00000009000	-	72	90.977	Pelodiscus_sinensis
ENSORLG00015014384	srsf1a	100	96.825	ENSPMGG00000013112	-	100	96.825	Periophthalmus_magnuspinnatus
ENSORLG00015014384	srsf1a	96	82.627	ENSPMGG00000005467	-	97	77.731	Periophthalmus_magnuspinnatus
ENSORLG00015014384	srsf1a	98	84.774	ENSPEMG00000021416	Srsf1	88	86.547	Peromyscus_maniculatus_bairdii
ENSORLG00015014384	srsf1a	83	90.206	ENSPCIG00000006076	-	78	92.268	Phascolarctos_cinereus
ENSORLG00015014384	srsf1a	84	87.310	ENSPFOG00000018325	-	69	87.565	Poecilia_formosa
ENSORLG00015014384	srsf1a	84	87.310	ENSPLAG00000008416	srsf1b	78	87.565	Poecilia_latipinna
ENSORLG00015014384	srsf1a	53	99.187	ENSPMEG00000014312	-	99	99.187	Poecilia_mexicana
ENSORLG00015014384	srsf1a	84	87.310	ENSPMEG00000002388	-	78	87.565	Poecilia_mexicana
ENSORLG00015014384	srsf1a	53	99.187	ENSPMEG00000020607	-	99	99.187	Poecilia_mexicana
ENSORLG00015014384	srsf1a	100	99.184	ENSPREG00000009667	srsf1a	100	99.184	Poecilia_reticulata
ENSORLG00015014384	srsf1a	98	84.774	ENSPPYG00000008240	SRSF1	88	86.547	Pongo_abelii
ENSORLG00015014384	srsf1a	83	90.155	ENSPCAG00000005199	SRSF1	78	92.228	Procavia_capensis
ENSORLG00015014384	srsf1a	84	72.222	ENSPCOG00000025736	-	93	73.158	Propithecus_coquereli
ENSORLG00015014384	srsf1a	98	84.774	ENSPCOG00000023654	-	93	91.176	Propithecus_coquereli
ENSORLG00015014384	srsf1a	57	97.143	ENSPVAG00000000519	-	53	97.143	Pteropus_vampyrus
ENSORLG00015014384	srsf1a	83	91.099	ENSPNAG00000022241	srsf1a	78	91.099	Pygocentrus_nattereri
ENSORLG00015014384	srsf1a	83	91.623	ENSPNAG00000014601	srsf1b	78	91.623	Pygocentrus_nattereri
ENSORLG00015014384	srsf1a	83	90.155	ENSRNOG00000050323	Srsf1	78	92.228	Rattus_norvegicus
ENSORLG00015014384	srsf1a	98	84.774	ENSRBIG00000034445	-	93	91.176	Rhinopithecus_bieti
ENSORLG00015014384	srsf1a	98	84.774	ENSRROG00000041506	-	93	91.176	Rhinopithecus_roxellana
ENSORLG00015014384	srsf1a	98	84.774	ENSSBOG00000025377	-	93	91.176	Saimiri_boliviensis_boliviensis
ENSORLG00015014384	srsf1a	83	90.206	ENSSHAG00000002552	-	78	92.268	Sarcophilus_harrisii
ENSORLG00015014384	srsf1a	83	92.147	ENSSFOG00015004800	srsf1a	77	92.147	Scleropages_formosus
ENSORLG00015014384	srsf1a	100	97.551	ENSSMAG00000007018	-	100	97.551	Scophthalmus_maximus
ENSORLG00015014384	srsf1a	83	85.000	ENSSMAG00000009719	-	78	85.000	Scophthalmus_maximus
ENSORLG00015014384	srsf1a	100	99.134	ENSSDUG00000011303	-	100	99.134	Seriola_dumerili
ENSORLG00015014384	srsf1a	99	75.641	ENSSDUG00000003929	-	83	79.798	Seriola_dumerili
ENSORLG00015014384	srsf1a	83	79.167	ENSSLDG00000016868	-	89	76.126	Seriola_lalandi_dorsalis
ENSORLG00015014384	srsf1a	100	98.776	ENSSLDG00000010543	-	100	98.776	Seriola_lalandi_dorsalis
ENSORLG00015014384	srsf1a	98	70.614	ENSSLDG00000016895	-	77	83.696	Seriola_lalandi_dorsalis
ENSORLG00015014384	srsf1a	77	91.111	ENSSARG00000010949	-	62	92.222	Sorex_araneus
ENSORLG00015014384	srsf1a	98	84.362	ENSSPUG00000000804	-	91	91.160	Sphenodon_punctatus
ENSORLG00015014384	srsf1a	83	84.951	ENSSPAG00000014152	-	80	84.951	Stegastes_partitus
ENSORLG00015014384	srsf1a	100	99.187	ENSSPAG00000022562	-	100	99.187	Stegastes_partitus
ENSORLG00015014384	srsf1a	98	84.774	ENSSSCG00000017626	-	88	86.547	Sus_scrofa
ENSORLG00015014384	srsf1a	57	87.970	ENSTGUG00000008416	-	72	90.977	Taeniopygia_guttata
ENSORLG00015014384	srsf1a	100	98.776	ENSTRUG00000003691	srsf1a	100	98.776	Takifugu_rubripes
ENSORLG00015014384	srsf1a	100	98.776	ENSTNIG00000016223	srsf1a	99	98.776	Tetraodon_nigroviridis
ENSORLG00015014384	srsf1a	77	88.333	ENSTBEG00000015378	-	62	91.111	Tupaia_belangeri
ENSORLG00015014384	srsf1a	56	88.636	ENSTTRG00000007310	SRSF1	72	91.667	Tursiops_truncatus
ENSORLG00015014384	srsf1a	83	90.155	ENSUAMG00000009858	SRSF1	78	92.228	Ursus_americanus
ENSORLG00015014384	srsf1a	98	84.774	ENSUMAG00000000455	-	88	86.547	Ursus_maritimus
ENSORLG00015014384	srsf1a	83	89.637	ENSVPAG00000010094	SRSF1	78	91.710	Vicugna_pacos
ENSORLG00015014384	srsf1a	98	84.774	ENSVVUG00000011882	-	88	86.547	Vulpes_vulpes
ENSORLG00015014384	srsf1a	83	92.147	ENSXETG00000008954	srsf1	79	84.434	Xenopus_tropicalis
ENSORLG00015014384	srsf1a	100	99.184	ENSXMAG00000011766	srsf1a	100	99.184	Xiphophorus_maculatus