EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015014393 (Gene tree)
Gene ID: -
Gene Symbol: pan3
Alias: -
Full Name: poly(A) specific ribonuclease subunit PAN3
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 19448 bases
Position: chr20:18610630-18630077
Accession: ZDB-GENE-070928-13
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015030578	zf-CCCH	PF00642.24	0.00032	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015020862	-	2289	-	ENSORLP00015030578	762 (aa)	-	-
ENSORLT00015020867	-	6303	-	ENSORLP00015013482	788 (aa)	-	-

Gene Model

Click here to download ENSORLG00015014393's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015014393's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015014393	pan3	99	78.321	ENSELUG00000014375	pan3	99	78.321	Esox_lucius
ENSORLG00015014393	pan3	100	86.842	ENSKMAG00000008813	pan3	100	86.842	Kryptolebias_marmoratus
ENSORLG00015014393	pan3	99	79.104	ENSLACG00000017156	PAN3	100	68.384	Latimeria_chalumnae
ENSORLG00015014393	pan3	100	95.305	ENSORLG00000008758	pan3	100	95.305	Oryzias_latipes
ENSORLG00015014393	pan3	100	93.782	ENSOMEG00000007798	pan3	100	93.782	Oryzias_melastigma
ENSORLG00015014393	pan3	73	71.575	ENSPKIG00000008329	-	96	71.575	Paramormyrops_kingsleyae
ENSORLG00015014393	pan3	97	65.464	ENSPMAG00000002383	pan3	100	65.335	Petromyzon_marinus
ENSORLG00015014393	pan3	100	90.532	ENSPREG00000019582	pan3	100	90.532	Poecilia_reticulata
ENSORLG00015014393	pan3	100	88.398	ENSSMAG00000014517	pan3	98	88.398	Scophthalmus_maximus
ENSORLG00015014393	pan3	100	74.250	ENSXETG00000011794	pan3	100	74.500	Xenopus_tropicalis