EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015014797 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 5354 bases
Position: chr23:14393708-14399061
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015013897	zf-C2H2	PF00096.26	2.9e-17	1	2
ENSORLP00015013897	zf-C2H2	PF00096.26	2.9e-17	2	2
ENSORLP00015013897	zf-met	PF12874.7	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015021392	-	2555	-	ENSORLP00015013897	622 (aa)	-	-

Gene Model

Click here to download ENSORLG00015014797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015014797's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015014797	-	53	46.491	ENSORLG00015012776	-	97	44.167
ENSORLG00015014797	-	97	37.247	ENSORLG00015007973	-	97	35.632
ENSORLG00015014797	-	51	38.824	ENSORLG00015007270	si:ch211-216l23.1	76	38.824
ENSORLG00015014797	-	55	37.500	ENSORLG00015018254	-	90	37.500
ENSORLG00015014797	-	75	40.000	ENSORLG00015017255	-	72	40.000
ENSORLG00015014797	-	50	46.988	ENSORLG00015016558	-	93	44.670
ENSORLG00015014797	-	53	39.683	ENSORLG00015007920	-	99	45.745

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015014797	-	59	40.351	ENSATEG00000024549	-	75	40.351	Anabas_testudineus
ENSORLG00015014797	-	99	61.404	ENSGAFG00000016139	-	99	61.404	Gambusia_affinis
ENSORLG00015014797	-	50	40.741	ENSIPUG00000009577	-	52	40.741	Ictalurus_punctatus
ENSORLG00015014797	-	51	38.922	ENSMAMG00000022152	-	64	38.922	Mastacembelus_armatus
ENSORLG00015014797	-	54	64.118	ENSMALG00000014761	-	98	64.118	Monopterus_albus
ENSORLG00015014797	-	100	97.428	ENSORLG00000014311	-	100	97.428	Oryzias_latipes
ENSORLG00015014797	-	100	97.428	ENSORLG00020016116	-	100	97.428	Oryzias_latipes_hni
ENSORLG00015014797	-	53	36.364	ENSOMEG00000015640	-	71	36.364	Oryzias_melastigma
ENSORLG00015014797	-	96	63.277	ENSPFOG00000004204	-	99	59.748	Poecilia_formosa
ENSORLG00015014797	-	99	60.925	ENSPLAG00000022088	-	93	60.925	Poecilia_latipinna
ENSORLG00015014797	-	99	61.244	ENSPMEG00000001411	-	93	61.244	Poecilia_mexicana
ENSORLG00015014797	-	99	61.882	ENSPREG00000004161	-	99	61.882	Poecilia_reticulata
ENSORLG00015014797	-	60	34.500	ENSPREG00000016270	-	78	38.983	Poecilia_reticulata
ENSORLG00015014797	-	96	61.386	ENSPNYG00000020534	-	99	61.296	Pundamilia_nyererei
ENSORLG00015014797	-	99	61.244	ENSXMAG00000011035	-	99	61.244	Xiphophorus_maculatus