EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015014812 (Gene tree)
Gene ID: -
Gene Symbol: mbd1b
Alias: -
Full Name: methyl-CpG binding domain protein 1b
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 17983 bases
Position: chr5:27891512-27909494
Accession: ZDB-GENE-030131-6318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015030876	MBD	PF01429.19	6.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015021419	-	7027	-	ENSORLP00015030876	830 (aa)	-	-

Gene Model

Click here to download ENSORLG00015014812's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015014812's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015014812	mbd1b	99	66.627	ENSAPOG00000012810	mbd1b	99	66.746	Acanthochromis_polyacanthus
ENSORLG00015014812	mbd1b	87	77.632	ENSACIG00000010590	mbd1b	99	56.214	Amphilophus_citrinellus
ENSORLG00015014812	mbd1b	99	67.584	ENSAOCG00000020272	mbd1b	99	68.062	Amphiprion_ocellaris
ENSORLG00015014812	mbd1b	99	67.503	ENSAPEG00000023230	mbd1b	99	67.981	Amphiprion_percula
ENSORLG00015014812	mbd1b	99	67.654	ENSATEG00000009608	mbd1b	99	68.009	Anabas_testudineus
ENSORLG00015014812	mbd1b	99	66.082	ENSACLG00000021383	mbd1b	99	66.082	Astatotilapia_calliptera
ENSORLG00015014812	mbd1b	97	56.381	ENSCSEG00000009082	mbd1b	99	56.148	Cynoglossus_semilaevis
ENSORLG00015014812	mbd1b	99	63.108	ENSCVAG00000001167	mbd1b	99	63.420	Cyprinodon_variegatus
ENSORLG00015014812	mbd1b	92	35.976	ENSDARG00000025699	mbd1b	90	34.219	Danio_rerio
ENSORLG00015014812	mbd1b	97	43.991	ENSELUG00000004375	mbd1b	99	42.497	Esox_lucius
ENSORLG00015014812	mbd1b	99	61.905	ENSFHEG00000020120	mbd1b	99	62.262	Fundulus_heteroclitus
ENSORLG00015014812	mbd1b	99	62.545	ENSGAFG00000008975	mbd1b	99	62.738	Gambusia_affinis
ENSORLG00015014812	mbd1b	80	51.153	ENSGACG00000012106	-	99	51.375	Gasterosteus_aculeatus
ENSORLG00015014812	mbd1b	99	66.316	ENSHBUG00000014270	mbd1b	99	66.316	Haplochromis_burtoni
ENSORLG00015014812	mbd1b	98	53.661	ENSHCOG00000009952	mbd1b	99	54.207	Hippocampus_comes
ENSORLG00015014812	mbd1b	92	36.275	ENSIPUG00000015243	-	96	35.273	Ictalurus_punctatus
ENSORLG00015014812	mbd1b	99	63.647	ENSKMAG00000020760	mbd1b	99	63.840	Kryptolebias_marmoratus
ENSORLG00015014812	mbd1b	83	31.421	ENSLACG00000002414	-	71	58.462	Latimeria_chalumnae
ENSORLG00015014812	mbd1b	53	56.923	ENSMMUG00000009050	MBD1	72	30.383	Macaca_mulatta
ENSORLG00015014812	mbd1b	77	65.443	ENSMAMG00000023341	-	96	66.929	Mastacembelus_armatus
ENSORLG00015014812	mbd1b	99	66.199	ENSMZEG00005010421	mbd1b	99	66.199	Maylandia_zebra
ENSORLG00015014812	mbd1b	81	87.037	ENSMMOG00000011607	mbd1b	83	87.037	Mola_mola
ENSORLG00015014812	mbd1b	99	65.094	ENSMALG00000007808	mbd1b	100	65.253	Monopterus_albus
ENSORLG00015014812	mbd1b	99	65.497	ENSONIG00000020289	mbd1b	99	65.965	Oreochromis_niloticus
ENSORLG00015014812	mbd1b	100	98.916	ENSORLG00000029390	mbd1b	100	98.916	Oryzias_latipes
ENSORLG00015014812	mbd1b	100	99.036	ENSORLG00020000575	mbd1b	100	99.036	Oryzias_latipes_hni
ENSORLG00015014812	mbd1b	100	87.574	ENSOMEG00000023660	mbd1b	100	87.574	Oryzias_melastigma
ENSORLG00015014812	mbd1b	99	62.500	ENSPFOG00000007511	mbd1b	99	62.843	Poecilia_formosa
ENSORLG00015014812	mbd1b	99	62.619	ENSPLAG00000021258	mbd1b	99	62.485	Poecilia_latipinna
ENSORLG00015014812	mbd1b	99	62.143	ENSPMEG00000024145	mbd1b	99	62.724	Poecilia_mexicana
ENSORLG00015014812	mbd1b	99	62.945	ENSPREG00000021805	mbd1b	99	63.126	Poecilia_reticulata
ENSORLG00015014812	mbd1b	90	39.826	ENSPNAG00000018075	mbd1b	97	36.879	Pygocentrus_nattereri
ENSORLG00015014812	mbd1b	63	53.750	ENSSFOG00015008591	-	64	53.750	Scleropages_formosus
ENSORLG00015014812	mbd1b	92	69.142	ENSSMAG00000014640	mbd1b	83	69.270	Scophthalmus_maximus
ENSORLG00015014812	mbd1b	90	71.932	ENSSDUG00000012996	mbd1b	99	65.881	Seriola_dumerili
ENSORLG00015014812	mbd1b	72	78.571	ENSSLDG00000012422	mbd1b	93	78.571	Seriola_lalandi_dorsalis
ENSORLG00015014812	mbd1b	88	81.366	ENSSPAG00000021447	mbd1b	96	81.366	Stegastes_partitus
ENSORLG00015014812	mbd1b	99	59.784	ENSTRUG00000013422	mbd1b	99	60.384	Takifugu_rubripes
ENSORLG00015014812	mbd1b	67	70.229	ENSTNIG00000007326	-	77	70.229	Tetraodon_nigroviridis
ENSORLG00015014812	mbd1b	99	61.910	ENSXMAG00000005628	mbd1b	99	62.456	Xiphophorus_maculatus