EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015014829 (Gene tree)
Gene ID: -
Gene Symbol: rab34a
Alias: -
Full Name: RAB34%2C member RAS oncogene family a
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 7676 bases
Position: chr13:10336213-10343888
Accession: ZDB-GENE-041010-197
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015030891	MMR_HSR1	PF01926.23	8.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015021367	-	2820	-	ENSORLP00015013884	254 (aa)	-	-
ENSORLT00015021368	-	2588	-	ENSORLP00015030891	266 (aa)	-	-
ENSORLT00015033272	-	2978	-	ENSORLP00015013922	268 (aa)	-	-

Gene Model

Click here to download ENSORLG00015014829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015014829's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015014829	rab34a	97	67.704	ENSORLG00015000584	rab34b	92	67.704
ENSORLG00015014829	rab34a	66	38.068	ENSORLG00015006970	rab6ba	83	38.068
ENSORLG00015014829	rab34a	60	31.875	ENSORLG00015021900	rab5c	72	31.875
ENSORLG00015014829	rab34a	60	32.500	ENSORLG00015012854	rab5aa	73	32.500
ENSORLG00015014829	rab34a	62	37.349	ENSORLG00015003202	RAB39B	77	37.349
ENSORLG00015014829	rab34a	77	30.622	ENSORLG00015012725	rab25a	66	30.622
ENSORLG00015014829	rab34a	62	36.970	ENSORLG00015004377	RAB15	78	36.970
ENSORLG00015014829	rab34a	62	30.909	ENSORLG00015014594	rab3db	74	30.909
ENSORLG00015014829	rab34a	68	34.239	ENSORLG00015016999	RAB11B	78	34.239
ENSORLG00015014829	rab34a	68	32.597	ENSORLG00015017737	rab5ab	82	32.597
ENSORLG00015014829	rab34a	74	31.980	ENSORLG00015007182	rab18b	95	31.980
ENSORLG00015014829	rab34a	77	31.132	ENSORLG00015004265	rab9b	93	31.132
ENSORLG00015014829	rab34a	77	34.783	ENSORLG00015010042	rab35b	96	34.783
ENSORLG00015014829	rab34a	65	34.857	ENSORLG00015006820	-	84	34.857
ENSORLG00015014829	rab34a	68	34.239	ENSORLG00015016946	rab11ba	64	34.239
ENSORLG00015014829	rab34a	63	38.323	ENSORLG00015000893	-	76	38.323
ENSORLG00015014829	rab34a	77	32.057	ENSORLG00015019569	rab25b	99	31.250
ENSORLG00015014829	rab34a	76	32.673	ENSORLG00015004273	rab42a	90	32.673
ENSORLG00015014829	rab34a	68	36.898	ENSORLG00015004033	rab23	81	38.889
ENSORLG00015014829	rab34a	61	39.752	ENSORLG00015013537	rab6bb	76	39.752
ENSORLG00015014829	rab34a	61	36.646	ENSORLG00015000618	-	78	36.646
ENSORLG00015014829	rab34a	60	40.000	ENSORLG00015015518	-	79	40.000
ENSORLG00015014829	rab34a	60	35.625	ENSORLG00015020972	rab30	77	35.625
ENSORLG00015014829	rab34a	61	38.509	ENSORLG00015010098	zgc:171927	74	38.509
ENSORLG00015014829	rab34a	65	35.632	ENSORLG00015000142	si:dkey-34d22.5	78	35.632
ENSORLG00015014829	rab34a	61	38.509	ENSORLG00015006162	rab6a	76	38.509
ENSORLG00015014829	rab34a	61	38.509	ENSORLG00015010161	RAB41	75	38.509
ENSORLG00015014829	rab34a	61	36.646	ENSORLG00015010986	rab1ab	78	36.646
ENSORLG00015014829	rab34a	62	37.576	ENSORLG00015022289	-	77	37.576
ENSORLG00015014829	rab34a	59	34.615	ENSORLG00015020173	rab11bb	70	34.615
ENSORLG00015014829	rab34a	61	36.585	ENSORLG00015007869	rab12	66	36.585
ENSORLG00015014829	rab34a	63	37.126	ENSORLG00015013638	rab15	77	37.126
ENSORLG00015014829	rab34a	77	31.884	ENSORLG00015013564	-	96	31.068
ENSORLG00015014829	rab34a	57	30.464	ENSORLG00015010289	rras	81	32.099
ENSORLG00015014829	rab34a	66	33.333	ENSORLG00015019591	rab11al	79	33.333
ENSORLG00015014829	rab34a	68	33.333	ENSORLG00015015121	si:dkey-13a21.4	88	33.333
ENSORLG00015014829	rab34a	66	32.955	ENSORLG00015004739	rab18a	85	32.955
ENSORLG00015014829	rab34a	62	36.364	ENSORLG00015020900	rab2a	76	36.364
ENSORLG00015014829	rab34a	61	38.690	ENSORLG00015015327	rab33a	70	35.354
ENSORLG00015014829	rab34a	51	42.754	ENSORLG00015013453	-	57	42.754
ENSORLG00015014829	rab34a	63	37.725	ENSORLG00015006881	rab14	76	37.725

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015014829	rab34a	97	78.295	ENSG00000109113	RAB34	100	80.000	Homo_sapiens
ENSORLG00015014829	rab34a	100	89.850	ENSAPOG00000003165	rab34a	100	89.850	Acanthochromis_polyacanthus
ENSORLG00015014829	rab34a	97	79.070	ENSAMEG00000004697	RAB34	82	79.070	Ailuropoda_melanoleuca
ENSORLG00015014829	rab34a	83	84.305	ENSACIG00000008620	rab34a	100	84.305	Amphilophus_citrinellus
ENSORLG00015014829	rab34a	100	90.977	ENSAOCG00000018544	rab34a	100	90.977	Amphiprion_ocellaris
ENSORLG00015014829	rab34a	100	90.977	ENSAPEG00000010503	rab34a	100	90.977	Amphiprion_percula
ENSORLG00015014829	rab34a	100	88.390	ENSATEG00000023047	rab34a	100	88.390	Anabas_testudineus
ENSORLG00015014829	rab34a	97	78.682	ENSANAG00000023861	RAB34	99	78.682	Aotus_nancymaae
ENSORLG00015014829	rab34a	100	89.888	ENSACLG00000005093	rab34a	100	89.888	Astatotilapia_calliptera
ENSORLG00015014829	rab34a	97	83.398	ENSAMXG00000043003	rab34a	100	83.398	Astyanax_mexicanus
ENSORLG00015014829	rab34a	93	78.947	ENSBTAG00000046129	RAB34	99	70.979	Bos_taurus
ENSORLG00015014829	rab34a	97	78.295	ENSCJAG00000013101	RAB34	99	78.295	Callithrix_jacchus
ENSORLG00015014829	rab34a	97	77.519	ENSCAFG00000018780	RAB34	99	77.519	Canis_familiaris
ENSORLG00015014829	rab34a	97	77.519	ENSCAFG00020011740	RAB34	99	77.519	Canis_lupus_dingo
ENSORLG00015014829	rab34a	97	78.682	ENSCHIG00000014703	RAB34	99	78.682	Capra_hircus
ENSORLG00015014829	rab34a	97	78.682	ENSTSYG00000030891	RAB34	99	78.682	Carlito_syrichta
ENSORLG00015014829	rab34a	90	79.916	ENSCAPG00000008237	RAB34	99	79.916	Cavia_aperea
ENSORLG00015014829	rab34a	97	78.682	ENSCPOG00000001449	RAB34	99	78.682	Cavia_porcellus
ENSORLG00015014829	rab34a	97	78.682	ENSCCAG00000034632	RAB34	99	78.682	Cebus_capucinus
ENSORLG00015014829	rab34a	97	78.295	ENSCLAG00000009672	RAB34	99	78.295	Chinchilla_lanigera
ENSORLG00015014829	rab34a	97	77.132	ENSCSAG00000007143	RAB34	99	77.132	Chlorocebus_sabaeus
ENSORLG00015014829	rab34a	97	76.357	ENSCHOG00000009871	RAB34	99	76.357	Choloepus_hoffmanni
ENSORLG00015014829	rab34a	97	77.992	ENSCPBG00000020275	RAB34	99	77.992	Chrysemys_picta_bellii
ENSORLG00015014829	rab34a	97	77.519	ENSCANG00000033566	RAB34	99	77.519	Colobus_angolensis_palliatus
ENSORLG00015014829	rab34a	97	78.295	ENSCGRG00001000893	Rab34	99	78.295	Cricetulus_griseus_chok1gshd
ENSORLG00015014829	rab34a	97	78.295	ENSCGRG00000017588	Rab34	99	78.295	Cricetulus_griseus_crigri
ENSORLG00015014829	rab34a	97	85.714	ENSCSEG00000012961	rab34a	100	85.714	Cynoglossus_semilaevis
ENSORLG00015014829	rab34a	100	89.098	ENSCVAG00000018191	rab34a	100	89.098	Cyprinodon_variegatus
ENSORLG00015014829	rab34a	97	81.538	ENSDARG00000045628	rab34a	100	82.158	Danio_rerio
ENSORLG00015014829	rab34a	97	77.907	ENSDNOG00000019485	RAB34	99	77.907	Dasypus_novemcinctus
ENSORLG00015014829	rab34a	97	77.907	ENSDORG00000011452	Rab34	99	77.907	Dipodomys_ordii
ENSORLG00015014829	rab34a	97	77.220	ENSEASG00005009898	RAB34	100	77.220	Equus_asinus_asinus
ENSORLG00015014829	rab34a	97	76.923	ENSECAG00000007212	RAB34	100	76.923	Equus_caballus
ENSORLG00015014829	rab34a	57	84.868	ENSEEUG00000004731	RAB34	100	84.868	Erinaceus_europaeus
ENSORLG00015014829	rab34a	99	84.151	ENSELUG00000022157	rab34a	100	84.151	Esox_lucius
ENSORLG00015014829	rab34a	97	79.070	ENSFCAG00000003937	RAB34	99	79.070	Felis_catus
ENSORLG00015014829	rab34a	97	79.070	ENSFDAG00000016178	RAB34	99	79.070	Fukomys_damarensis
ENSORLG00015014829	rab34a	97	89.575	ENSFHEG00000013691	rab34a	100	89.575	Fundulus_heteroclitus
ENSORLG00015014829	rab34a	100	80.827	ENSGMOG00000016238	rab34a	100	80.827	Gadus_morhua
ENSORLG00015014829	rab34a	97	77.606	ENSGALG00000026315	RAB34	100	77.606	Gallus_gallus
ENSORLG00015014829	rab34a	100	89.474	ENSGAFG00000012579	rab34a	100	89.474	Gambusia_affinis
ENSORLG00015014829	rab34a	100	87.594	ENSGACG00000011190	rab34a	100	87.594	Gasterosteus_aculeatus
ENSORLG00015014829	rab34a	83	77.027	ENSGAGG00000012473	RAB34	90	79.426	Gopherus_agassizii
ENSORLG00015014829	rab34a	97	78.295	ENSGGOG00000016726	RAB34	99	78.295	Gorilla_gorilla
ENSORLG00015014829	rab34a	100	90.602	ENSHBUG00000016064	rab34a	100	90.602	Haplochromis_burtoni
ENSORLG00015014829	rab34a	97	78.378	ENSHGLG00000008023	RAB34	100	78.378	Heterocephalus_glaber_female
ENSORLG00015014829	rab34a	97	78.378	ENSHGLG00100017982	RAB34	100	78.378	Heterocephalus_glaber_male
ENSORLG00015014829	rab34a	100	83.083	ENSHCOG00000020527	rab34a	100	83.083	Hippocampus_comes
ENSORLG00015014829	rab34a	97	82.239	ENSIPUG00000017447	rab34a	100	82.239	Ictalurus_punctatus
ENSORLG00015014829	rab34a	97	78.295	ENSSTOG00000025062	RAB34	99	78.295	Ictidomys_tridecemlineatus
ENSORLG00015014829	rab34a	97	79.070	ENSJJAG00000010285	Rab34	99	79.070	Jaculus_jaculus
ENSORLG00015014829	rab34a	100	85.338	ENSKMAG00000019647	rab34a	100	85.338	Kryptolebias_marmoratus
ENSORLG00015014829	rab34a	100	87.970	ENSLBEG00000026006	rab34a	100	87.970	Labrus_bergylta
ENSORLG00015014829	rab34a	97	77.992	ENSLACG00000001081	RAB34	100	77.992	Latimeria_chalumnae
ENSORLG00015014829	rab34a	98	83.908	ENSLOCG00000005802	rab34a	98	83.908	Lepisosteus_oculatus
ENSORLG00015014829	rab34a	97	76.834	ENSLAFG00000013385	RAB34	100	76.834	Loxodonta_africana
ENSORLG00015014829	rab34a	97	77.519	ENSMFAG00000045768	RAB34	99	77.519	Macaca_fascicularis
ENSORLG00015014829	rab34a	97	77.519	ENSMMUG00000007293	RAB34	99	77.519	Macaca_mulatta
ENSORLG00015014829	rab34a	97	77.606	ENSMNEG00000030368	RAB34	99	77.606	Macaca_nemestrina
ENSORLG00015014829	rab34a	80	79.907	ENSMLEG00000034269	RAB34	95	79.907	Mandrillus_leucophaeus
ENSORLG00015014829	rab34a	100	91.011	ENSMAMG00000018672	rab34a	100	91.011	Mastacembelus_armatus
ENSORLG00015014829	rab34a	100	90.226	ENSMZEG00005008306	rab34a	100	90.226	Maylandia_zebra
ENSORLG00015014829	rab34a	97	77.907	ENSMAUG00000017730	Rab34	99	77.907	Mesocricetus_auratus
ENSORLG00015014829	rab34a	97	78.764	ENSMICG00000016913	RAB34	99	78.764	Microcebus_murinus
ENSORLG00015014829	rab34a	97	77.519	ENSMOCG00000016580	Rab34	99	77.519	Microtus_ochrogaster
ENSORLG00015014829	rab34a	97	79.389	ENSMMOG00000014400	rab34a	100	79.389	Mola_mola
ENSORLG00015014829	rab34a	91	66.667	ENSMODG00000019295	RAB34	93	66.667	Monodelphis_domestica
ENSORLG00015014829	rab34a	100	86.842	ENSMALG00000016715	rab34a	100	86.842	Monopterus_albus
ENSORLG00015014829	rab34a	97	77.907	MGP_CAROLIEiJ_G0016794	Rab34	99	77.907	Mus_caroli
ENSORLG00015014829	rab34a	97	77.519	ENSMUSG00000002059	Rab34	99	77.519	Mus_musculus
ENSORLG00015014829	rab34a	97	77.519	MGP_PahariEiJ_G0017931	Rab34	99	77.519	Mus_pahari
ENSORLG00015014829	rab34a	97	77.519	MGP_SPRETEiJ_G0017637	Rab34	99	77.519	Mus_spretus
ENSORLG00015014829	rab34a	97	77.907	ENSMPUG00000014191	RAB34	99	77.907	Mustela_putorius_furo
ENSORLG00015014829	rab34a	79	81.340	ENSMLUG00000012440	RAB34	99	81.340	Myotis_lucifugus
ENSORLG00015014829	rab34a	97	77.519	ENSNGAG00000002744	Rab34	99	77.519	Nannospalax_galili
ENSORLG00015014829	rab34a	97	90.385	ENSNBRG00000019750	rab34a	100	90.385	Neolamprologus_brichardi
ENSORLG00015014829	rab34a	97	78.295	ENSNLEG00000002777	RAB34	99	78.295	Nomascus_leucogenys
ENSORLG00015014829	rab34a	90	76.250	ENSMEUG00000009450	RAB34	99	76.250	Notamacropus_eugenii
ENSORLG00015014829	rab34a	97	77.519	ENSOPRG00000012602	RAB34	99	77.519	Ochotona_princeps
ENSORLG00015014829	rab34a	97	77.519	ENSODEG00000012270	RAB34	99	77.519	Octodon_degus
ENSORLG00015014829	rab34a	100	89.850	ENSONIG00000013175	rab34a	100	89.850	Oreochromis_niloticus
ENSORLG00015014829	rab34a	97	61.887	ENSOANG00000000147	RAB34	100	61.887	Ornithorhynchus_anatinus
ENSORLG00015014829	rab34a	97	78.682	ENSOCUG00000023006	RAB34	82	78.682	Oryctolagus_cuniculus
ENSORLG00015014829	rab34a	100	99.248	ENSORLG00000004394	rab34a	100	99.248	Oryzias_latipes
ENSORLG00015014829	rab34a	100	99.248	ENSORLG00020010041	rab34a	100	99.248	Oryzias_latipes_hni
ENSORLG00015014829	rab34a	99	94.717	ENSOMEG00000003647	rab34a	86	94.717	Oryzias_melastigma
ENSORLG00015014829	rab34a	97	78.295	ENSOARG00000003396	RAB34	95	78.295	Ovis_aries
ENSORLG00015014829	rab34a	97	78.295	ENSPPAG00000037180	RAB34	99	78.295	Pan_paniscus
ENSORLG00015014829	rab34a	97	79.070	ENSPPRG00000001286	RAB34	99	79.070	Panthera_pardus
ENSORLG00015014829	rab34a	97	79.070	ENSPTIG00000021241	RAB34	99	79.070	Panthera_tigris_altaica
ENSORLG00015014829	rab34a	97	78.295	ENSPTRG00000008931	RAB34	99	78.295	Pan_troglodytes
ENSORLG00015014829	rab34a	97	77.519	ENSPANG00000023435	RAB34	99	77.519	Papio_anubis
ENSORLG00015014829	rab34a	97	80.309	ENSPKIG00000006695	rab34a	100	80.309	Paramormyrops_kingsleyae
ENSORLG00015014829	rab34a	97	86.100	ENSPMGG00000004027	rab34a	100	86.100	Periophthalmus_magnuspinnatus
ENSORLG00015014829	rab34a	97	77.907	ENSPEMG00000015055	Rab34	99	77.907	Peromyscus_maniculatus_bairdii
ENSORLG00015014829	rab34a	97	76.062	ENSPCIG00000017945	-	65	76.062	Phascolarctos_cinereus
ENSORLG00015014829	rab34a	100	89.474	ENSPFOG00000008547	rab34a	86	89.474	Poecilia_formosa
ENSORLG00015014829	rab34a	100	89.850	ENSPLAG00000022991	rab34a	95	89.850	Poecilia_latipinna
ENSORLG00015014829	rab34a	100	89.850	ENSPMEG00000002086	rab34a	100	89.850	Poecilia_mexicana
ENSORLG00015014829	rab34a	77	88.835	ENSPREG00000008951	rab34a	83	88.835	Poecilia_reticulata
ENSORLG00015014829	rab34a	97	75.581	ENSPPYG00000008107	-	99	75.581	Pongo_abelii
ENSORLG00015014829	rab34a	97	76.357	ENSPCAG00000016994	RAB34	99	76.357	Procavia_capensis
ENSORLG00015014829	rab34a	97	79.070	ENSPCOG00000021648	RAB34	99	79.070	Propithecus_coquereli
ENSORLG00015014829	rab34a	97	77.519	ENSPVAG00000002921	RAB34	99	77.519	Pteropus_vampyrus
ENSORLG00015014829	rab34a	97	91.154	ENSPNYG00000017514	rab34a	100	91.154	Pundamilia_nyererei
ENSORLG00015014829	rab34a	97	86.873	ENSPNAG00000003179	rab34a	100	86.873	Pygocentrus_nattereri
ENSORLG00015014829	rab34a	97	77.907	ENSRNOG00000023375	Rab34	99	77.907	Rattus_norvegicus
ENSORLG00015014829	rab34a	97	76.744	ENSRBIG00000038841	RAB34	99	76.744	Rhinopithecus_bieti
ENSORLG00015014829	rab34a	97	76.744	ENSRROG00000004951	RAB34	99	76.744	Rhinopithecus_roxellana
ENSORLG00015014829	rab34a	97	75.581	ENSSBOG00000029883	RAB34	99	75.581	Saimiri_boliviensis_boliviensis
ENSORLG00015014829	rab34a	95	77.165	ENSSHAG00000014522	RAB34	77	77.165	Sarcophilus_harrisii
ENSORLG00015014829	rab34a	97	83.012	ENSSFOG00015004325	rab34a	100	83.012	Scleropages_formosus
ENSORLG00015014829	rab34a	100	89.139	ENSSMAG00000004343	rab34a	100	89.139	Scophthalmus_maximus
ENSORLG00015014829	rab34a	100	89.850	ENSSDUG00000010942	rab34a	100	89.850	Seriola_dumerili
ENSORLG00015014829	rab34a	100	89.474	ENSSLDG00000009573	rab34a	100	89.474	Seriola_lalandi_dorsalis
ENSORLG00015014829	rab34a	100	90.977	ENSSPAG00000017348	rab34a	100	90.977	Stegastes_partitus
ENSORLG00015014829	rab34a	97	78.682	ENSSSCG00000017769	RAB34	99	78.682	Sus_scrofa
ENSORLG00015014829	rab34a	76	82.439	ENSTRUG00000005937	rab34a	91	82.439	Takifugu_rubripes
ENSORLG00015014829	rab34a	97	69.349	ENSTRUG00000010393	-	100	69.349	Takifugu_rubripes
ENSORLG00015014829	rab34a	97	86.873	ENSTNIG00000016231	rab34a	100	86.873	Tetraodon_nigroviridis
ENSORLG00015014829	rab34a	97	78.682	ENSTBEG00000005193	RAB34	99	78.682	Tupaia_belangeri
ENSORLG00015014829	rab34a	97	77.907	ENSTTRG00000004102	RAB34	99	77.907	Tursiops_truncatus
ENSORLG00015014829	rab34a	97	78.295	ENSUAMG00000005003	RAB34	99	78.295	Ursus_americanus
ENSORLG00015014829	rab34a	90	79.498	ENSUMAG00000011766	-	63	79.498	Ursus_maritimus
ENSORLG00015014829	rab34a	97	77.519	ENSVVUG00000017083	RAB34	99	77.519	Vulpes_vulpes
ENSORLG00015014829	rab34a	97	76.062	ENSXETG00000019257	rab34	100	76.062	Xenopus_tropicalis
ENSORLG00015014829	rab34a	97	89.189	ENSXCOG00000009541	rab34a	100	89.189	Xiphophorus_couchianus
ENSORLG00015014829	rab34a	100	89.850	ENSXMAG00000026496	rab34a	100	89.850	Xiphophorus_maculatus