EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015015016 (Gene tree)
Gene ID: -
Gene Symbol: prpf3
Alias: -
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 10851 bases
Position: chr16:19387352-19398202
Accession: 101159943
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015014063	PRP3	PF08572.10	1.2e-76	1	1
ENSORLP00015030962	PRP3	PF08572.10	1.1e-69	1	1
ENSORLP00015030962	PWI	PF01480.17	4.1e-12	1	1
ENSORLP00015014063	PWI	PF01480.17	4.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015021607	-	2052	-	ENSORLP00015030962	683 (aa)	-	-
ENSORLT00015021583	-	2952	XM_011485324	ENSORLP00015014063	692 (aa)	XP_011483626	-

Gene Model

Click here to download ENSORLG00015015016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015015016's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015015016	prpf3	99	71.550	ENSG00000117360	PRPF3	100	72.443	Homo_sapiens
ENSORLG00015015016	prpf3	100	85.960	ENSAPOG00000015584	prpf3	100	86.963	Acanthochromis_polyacanthus
ENSORLG00015015016	prpf3	99	71.733	ENSAMEG00000001630	PRPF3	100	72.585	Ailuropoda_melanoleuca
ENSORLG00015015016	prpf3	100	84.922	ENSACIG00000007876	prpf3	100	85.206	Amphilophus_citrinellus
ENSORLG00015015016	prpf3	100	85.244	ENSAOCG00000011449	prpf3	100	86.533	Amphiprion_ocellaris
ENSORLG00015015016	prpf3	100	86.819	ENSATEG00000023583	prpf3	100	87.249	Anabas_testudineus
ENSORLG00015015016	prpf3	99	72.934	ENSAPLG00000002440	PRPF3	100	72.934	Anas_platyrhynchos
ENSORLG00015015016	prpf3	99	71.469	ENSACAG00000003176	PRPF3	100	72.340	Anolis_carolinensis
ENSORLG00015015016	prpf3	99	71.550	ENSANAG00000026138	PRPF3	100	72.443	Aotus_nancymaae
ENSORLG00015015016	prpf3	100	85.265	ENSACLG00000020127	prpf3	100	85.694	Astatotilapia_calliptera
ENSORLG00015015016	prpf3	100	79.692	ENSAMXG00000007306	prpf3	100	79.692	Astyanax_mexicanus
ENSORLG00015015016	prpf3	99	71.550	ENSBTAG00000013946	PRPF3	100	72.443	Bos_taurus
ENSORLG00015015016	prpf3	81	39.437	WBGene00010844	prp-3	96	33.778	Caenorhabditis_elegans
ENSORLG00015015016	prpf3	99	71.550	ENSCJAG00000009926	PRPF3	100	72.443	Callithrix_jacchus
ENSORLG00015015016	prpf3	99	71.550	ENSCAFG00000011820	PRPF3	100	72.443	Canis_familiaris
ENSORLG00015015016	prpf3	81	71.781	ENSCAFG00020019653	PRPF3	100	72.359	Canis_lupus_dingo
ENSORLG00015015016	prpf3	99	71.550	ENSCHIG00000015434	PRPF3	100	72.443	Capra_hircus
ENSORLG00015015016	prpf3	99	71.652	ENSTSYG00000001383	PRPF3	100	72.507	Carlito_syrichta
ENSORLG00015015016	prpf3	93	62.000	ENSCAPG00000017812	PRPF3	95	62.615	Cavia_aperea
ENSORLG00015015016	prpf3	99	71.591	ENSCPOG00000008068	PRPF3	100	72.443	Cavia_porcellus
ENSORLG00015015016	prpf3	99	71.550	ENSCCAG00000026380	PRPF3	100	72.443	Cebus_capucinus
ENSORLG00015015016	prpf3	99	58.898	ENSCATG00000041778	PRPF3	100	59.746	Cercocebus_atys
ENSORLG00015015016	prpf3	99	71.733	ENSCLAG00000015009	PRPF3	100	72.585	Chinchilla_lanigera
ENSORLG00015015016	prpf3	76	79.927	ENSCHOG00000011645	PRPF3	76	81.022	Choloepus_hoffmanni
ENSORLG00015015016	prpf3	99	71.937	ENSCPBG00000008216	PRPF3	100	72.792	Chrysemys_picta_bellii
ENSORLG00015015016	prpf3	60	59.091	ENSCING00000003312	-	99	59.091	Ciona_intestinalis
ENSORLG00015015016	prpf3	82	51.042	ENSCSAVG00000008720	-	96	51.042	Ciona_savignyi
ENSORLG00015015016	prpf3	99	70.982	ENSCANG00000036769	PRPF3	100	71.875	Colobus_angolensis_palliatus
ENSORLG00015015016	prpf3	99	71.550	ENSCGRG00001019100	Prpf3	100	72.443	Cricetulus_griseus_chok1gshd
ENSORLG00015015016	prpf3	99	71.550	ENSCGRG00000007322	Prpf3	100	72.443	Cricetulus_griseus_crigri
ENSORLG00015015016	prpf3	100	84.278	ENSCSEG00000002532	prpf3	100	84.278	Cynoglossus_semilaevis
ENSORLG00015015016	prpf3	100	86.063	ENSCVAG00000009318	prpf3	100	86.494	Cyprinodon_variegatus
ENSORLG00015015016	prpf3	100	79.801	ENSDARG00000086425	prpf3	100	79.861	Danio_rerio
ENSORLG00015015016	prpf3	99	65.906	ENSDNOG00000005904	PRPF3	100	66.619	Dasypus_novemcinctus
ENSORLG00015015016	prpf3	93	71.407	ENSDORG00000008664	Prpf3	99	72.477	Dipodomys_ordii
ENSORLG00015015016	prpf3	80	53.229	FBgn0036915	Prp3	99	53.559	Drosophila_melanogaster
ENSORLG00015015016	prpf3	99	70.756	ENSETEG00000019124	PRPF3	100	71.652	Echinops_telfairi
ENSORLG00015015016	prpf3	100	61.230	ENSEBUG00000011680	prpf3	100	61.631	Eptatretus_burgeri
ENSORLG00015015016	prpf3	99	71.408	ENSEASG00005001566	PRPF3	100	72.301	Equus_asinus_asinus
ENSORLG00015015016	prpf3	99	71.550	ENSECAG00000019840	PRPF3	100	72.443	Equus_caballus
ENSORLG00015015016	prpf3	84	71.558	ENSEEUG00000007338	PRPF3	85	72.235	Erinaceus_europaeus
ENSORLG00015015016	prpf3	100	74.148	ENSELUG00000013624	prpf3	100	74.468	Esox_lucius
ENSORLG00015015016	prpf3	99	71.550	ENSFCAG00000013940	PRPF3	100	72.443	Felis_catus
ENSORLG00015015016	prpf3	99	71.693	ENSFDAG00000010365	PRPF3	100	72.585	Fukomys_damarensis
ENSORLG00015015016	prpf3	100	85.899	ENSFHEG00000021746	prpf3	100	86.331	Fundulus_heteroclitus
ENSORLG00015015016	prpf3	100	81.223	ENSGMOG00000008535	prpf3	100	81.223	Gadus_morhua
ENSORLG00015015016	prpf3	99	73.077	ENSGALG00000028205	PRPF3	100	73.077	Gallus_gallus
ENSORLG00015015016	prpf3	100	85.324	ENSGAFG00000012671	prpf3	100	85.755	Gambusia_affinis
ENSORLG00015015016	prpf3	100	84.758	ENSGACG00000011792	prpf3	100	85.185	Gasterosteus_aculeatus
ENSORLG00015015016	prpf3	99	71.937	ENSGAGG00000013765	PRPF3	100	74.597	Gopherus_agassizii
ENSORLG00015015016	prpf3	86	75.660	ENSGGOG00000013174	PRPF3	100	76.540	Gorilla_gorilla
ENSORLG00015015016	prpf3	100	85.551	ENSHBUG00000003493	prpf3	100	85.980	Haplochromis_burtoni
ENSORLG00015015016	prpf3	99	71.408	ENSHGLG00000016569	PRPF3	100	72.301	Heterocephalus_glaber_female
ENSORLG00015015016	prpf3	99	52.063	ENSHGLG00000016033	-	96	65.455	Heterocephalus_glaber_female
ENSORLG00015015016	prpf3	90	65.455	ENSHGLG00100008951	-	96	65.455	Heterocephalus_glaber_male
ENSORLG00015015016	prpf3	99	71.408	ENSHGLG00100007590	PRPF3	100	72.301	Heterocephalus_glaber_male
ENSORLG00015015016	prpf3	100	81.143	ENSHCOG00000014058	prpf3	100	82.000	Hippocampus_comes
ENSORLG00015015016	prpf3	100	79.487	ENSIPUG00000000902	PRPF3	100	79.630	Ictalurus_punctatus
ENSORLG00015015016	prpf3	99	71.550	ENSSTOG00000001889	PRPF3	100	72.443	Ictidomys_tridecemlineatus
ENSORLG00015015016	prpf3	100	85.694	ENSKMAG00000001390	prpf3	100	86.409	Kryptolebias_marmoratus
ENSORLG00015015016	prpf3	100	86.610	ENSLBEG00000026310	prpf3	100	87.464	Labrus_bergylta
ENSORLG00015015016	prpf3	93	68.147	ENSLACG00000010541	PRPF3	100	68.606	Latimeria_chalumnae
ENSORLG00015015016	prpf3	99	71.550	ENSLAFG00000004713	PRPF3	100	72.443	Loxodonta_africana
ENSORLG00015015016	prpf3	99	71.550	ENSMFAG00000039791	PRPF3	100	72.443	Macaca_fascicularis
ENSORLG00015015016	prpf3	90	72.496	ENSMMUG00000016301	PRPF3	97	73.016	Macaca_mulatta
ENSORLG00015015016	prpf3	99	71.550	ENSMNEG00000038161	PRPF3	100	72.443	Macaca_nemestrina
ENSORLG00015015016	prpf3	98	49.209	ENSMLEG00000041065	-	97	48.777	Mandrillus_leucophaeus
ENSORLG00015015016	prpf3	86	75.660	ENSMLEG00000040609	PRPF3	100	76.540	Mandrillus_leucophaeus
ENSORLG00015015016	prpf3	100	86.610	ENSMAMG00000014968	prpf3	100	86.610	Mastacembelus_armatus
ENSORLG00015015016	prpf3	100	86.771	ENSMZEG00005015970	prpf3	100	87.198	Maylandia_zebra
ENSORLG00015015016	prpf3	99	73.077	ENSMGAG00000000707	PRPF3	100	73.077	Meleagris_gallopavo
ENSORLG00015015016	prpf3	99	71.550	ENSMAUG00000017112	Prpf3	100	72.443	Mesocricetus_auratus
ENSORLG00015015016	prpf3	99	71.449	ENSMICG00000015386	PRPF3	100	74.332	Microcebus_murinus
ENSORLG00015015016	prpf3	99	71.469	ENSMOCG00000000242	Prpf3	100	72.365	Microtus_ochrogaster
ENSORLG00015015016	prpf3	100	78.843	ENSMMOG00000016131	prpf3	100	79.408	Mola_mola
ENSORLG00015015016	prpf3	99	71.977	ENSMODG00000018774	PRPF3	100	72.831	Monodelphis_domestica
ENSORLG00015015016	prpf3	100	83.571	ENSMALG00000007257	prpf3	100	83.571	Monopterus_albus
ENSORLG00015015016	prpf3	99	71.591	MGP_CAROLIEiJ_G0025354	Prpf3	100	72.443	Mus_caroli
ENSORLG00015015016	prpf3	99	71.591	ENSMUSG00000015748	Prpf3	100	72.443	Mus_musculus
ENSORLG00015015016	prpf3	99	71.674	MGP_PahariEiJ_G0026798	Prpf3	100	72.532	Mus_pahari
ENSORLG00015015016	prpf3	99	71.591	MGP_SPRETEiJ_G0026298	Prpf3	100	72.443	Mus_spretus
ENSORLG00015015016	prpf3	99	69.943	ENSMPUG00000005080	PRPF3	100	70.940	Mustela_putorius_furo
ENSORLG00015015016	prpf3	99	71.510	ENSMLUG00000004646	-	100	72.404	Myotis_lucifugus
ENSORLG00015015016	prpf3	99	71.550	ENSNGAG00000000910	Prpf3	100	72.443	Nannospalax_galili
ENSORLG00015015016	prpf3	100	85.795	ENSNBRG00000003462	prpf3	100	86.217	Neolamprologus_brichardi
ENSORLG00015015016	prpf3	90	72.496	ENSNLEG00000009841	PRPF3	99	73.016	Nomascus_leucogenys
ENSORLG00015015016	prpf3	83	63.934	ENSMEUG00000008733	PRPF3	89	65.164	Notamacropus_eugenii
ENSORLG00015015016	prpf3	99	71.510	ENSOPRG00000010139	PRPF3	100	72.365	Ochotona_princeps
ENSORLG00015015016	prpf3	99	54.184	ENSODEG00000014412	-	100	54.894	Octodon_degus
ENSORLG00015015016	prpf3	99	71.875	ENSODEG00000011363	-	100	72.727	Octodon_degus
ENSORLG00015015016	prpf3	100	86.913	ENSONIG00000006394	prpf3	100	87.340	Oreochromis_niloticus
ENSORLG00015015016	prpf3	99	55.177	ENSOANG00000015441	PRPF3	100	55.177	Ornithorhynchus_anatinus
ENSORLG00015015016	prpf3	99	71.550	ENSOCUG00000011760	PRPF3	100	72.443	Oryctolagus_cuniculus
ENSORLG00015015016	prpf3	100	99.422	ENSORLG00000010330	prpf3	100	99.422	Oryzias_latipes
ENSORLG00015015016	prpf3	100	99.566	ENSORLG00020009054	prpf3	100	99.566	Oryzias_latipes_hni
ENSORLG00015015016	prpf3	100	96.110	ENSOMEG00000000940	prpf3	100	96.110	Oryzias_melastigma
ENSORLG00015015016	prpf3	99	67.949	ENSOGAG00000005352	PRPF3	100	68.848	Otolemur_garnettii
ENSORLG00015015016	prpf3	99	71.550	ENSOARG00000020798	PRPF3	100	72.443	Ovis_aries
ENSORLG00015015016	prpf3	98	55.878	ENSPPAG00000043769	-	99	55.797	Pan_paniscus
ENSORLG00015015016	prpf3	99	71.408	ENSPPAG00000030983	PRPF3	100	72.301	Pan_paniscus
ENSORLG00015015016	prpf3	99	71.550	ENSPPRG00000000731	PRPF3	100	72.443	Panthera_pardus
ENSORLG00015015016	prpf3	99	71.550	ENSPTIG00000005516	PRPF3	100	72.443	Panthera_tigris_altaica
ENSORLG00015015016	prpf3	98	55.007	ENSPTRG00000047819	-	99	54.928	Pan_troglodytes
ENSORLG00015015016	prpf3	99	71.550	ENSPTRG00000001254	PRPF3	100	72.443	Pan_troglodytes
ENSORLG00015015016	prpf3	99	71.408	ENSPANG00000000499	PRPF3	100	72.301	Papio_anubis
ENSORLG00015015016	prpf3	100	80.682	ENSPKIG00000010501	prpf3	100	80.682	Paramormyrops_kingsleyae
ENSORLG00015015016	prpf3	99	72.119	ENSPSIG00000014877	PRPF3	100	72.546	Pelodiscus_sinensis
ENSORLG00015015016	prpf3	100	75.758	ENSPMGG00000007776	prpf3	100	75.758	Periophthalmus_magnuspinnatus
ENSORLG00015015016	prpf3	99	71.550	ENSPEMG00000011672	Prpf3	100	72.443	Peromyscus_maniculatus_bairdii
ENSORLG00015015016	prpf3	62	70.481	ENSPMAG00000005588	prpf3	97	70.481	Petromyzon_marinus
ENSORLG00015015016	prpf3	99	71.977	ENSPCIG00000008795	PRPF3	100	72.831	Phascolarctos_cinereus
ENSORLG00015015016	prpf3	100	84.615	ENSPFOG00000013638	prpf3	100	85.328	Poecilia_formosa
ENSORLG00015015016	prpf3	100	85.180	ENSPLAG00000018103	prpf3	100	85.899	Poecilia_latipinna
ENSORLG00015015016	prpf3	100	85.036	ENSPMEG00000023546	prpf3	100	85.755	Poecilia_mexicana
ENSORLG00015015016	prpf3	100	85.899	ENSPREG00000017216	prpf3	100	86.331	Poecilia_reticulata
ENSORLG00015015016	prpf3	93	70.840	ENSPPYG00000000900	PRPF3	99	71.799	Pongo_abelii
ENSORLG00015015016	prpf3	76	63.415	ENSPPYG00000018646	-	99	63.977	Pongo_abelii
ENSORLG00015015016	prpf3	85	73.134	ENSPCAG00000014908	PRPF3	86	74.129	Procavia_capensis
ENSORLG00015015016	prpf3	99	71.408	ENSPCOG00000013828	PRPF3	100	72.301	Propithecus_coquereli
ENSORLG00015015016	prpf3	99	71.083	ENSPVAG00000013472	PRPF3	100	71.937	Pteropus_vampyrus
ENSORLG00015015016	prpf3	100	85.795	ENSPNYG00000004279	prpf3	100	86.217	Pundamilia_nyererei
ENSORLG00015015016	prpf3	100	79.916	ENSPNAG00000001799	prpf3	100	79.916	Pygocentrus_nattereri
ENSORLG00015015016	prpf3	99	71.733	ENSRNOG00000025629	Prpf3	100	72.585	Rattus_norvegicus
ENSORLG00015015016	prpf3	83	68.085	ENSRBIG00000028854	PRPF3	98	70.213	Rhinopithecus_bieti
ENSORLG00015015016	prpf3	99	71.550	ENSRROG00000027464	PRPF3	100	72.443	Rhinopithecus_roxellana
ENSORLG00015015016	prpf3	99	65.057	ENSSBOG00000033104	PRPF3	100	65.909	Saimiri_boliviensis_boliviensis
ENSORLG00015015016	prpf3	99	71.591	ENSSHAG00000009548	PRPF3	100	72.443	Sarcophilus_harrisii
ENSORLG00015015016	prpf3	100	80.084	ENSSFOG00015022014	prpf3	100	80.084	Scleropages_formosus
ENSORLG00015015016	prpf3	100	85.493	ENSSMAG00000015739	prpf3	100	85.915	Scophthalmus_maximus
ENSORLG00015015016	prpf3	100	82.973	ENSSDUG00000006840	prpf3	100	83.117	Seriola_dumerili
ENSORLG00015015016	prpf3	100	84.529	ENSSLDG00000015423	prpf3	100	85.513	Seriola_lalandi_dorsalis
ENSORLG00015015016	prpf3	99	71.510	ENSSARG00000011064	PRPF3	100	72.365	Sorex_araneus
ENSORLG00015015016	prpf3	99	71.629	ENSSPUG00000000809	PRPF3	100	72.051	Sphenodon_punctatus
ENSORLG00015015016	prpf3	100	86.591	ENSSPAG00000018721	prpf3	100	87.874	Stegastes_partitus
ENSORLG00015015016	prpf3	99	71.550	ENSSSCG00000030119	PRPF3	100	74.510	Sus_scrofa
ENSORLG00015015016	prpf3	99	62.197	ENSTGUG00000004552	PRPF3	100	62.197	Taeniopygia_guttata
ENSORLG00015015016	prpf3	100	81.753	ENSTRUG00000014923	prpf3	100	82.184	Takifugu_rubripes
ENSORLG00015015016	prpf3	99	82.528	ENSTNIG00000008058	prpf3	100	82.528	Tetraodon_nigroviridis
ENSORLG00015015016	prpf3	81	70.975	ENSTBEG00000014072	PRPF3	88	73.138	Tupaia_belangeri
ENSORLG00015015016	prpf3	99	66.619	ENSTTRG00000010616	PRPF3	100	67.568	Tursiops_truncatus
ENSORLG00015015016	prpf3	79	73.975	ENSUAMG00000009345	PRPF3	100	74.510	Ursus_americanus
ENSORLG00015015016	prpf3	99	71.550	ENSUMAG00000003720	PRPF3	100	72.443	Ursus_maritimus
ENSORLG00015015016	prpf3	88	76.298	ENSVPAG00000005425	PRPF3	89	76.975	Vicugna_pacos
ENSORLG00015015016	prpf3	99	71.571	ENSVVUG00000007933	PRPF3	100	72.443	Vulpes_vulpes
ENSORLG00015015016	prpf3	99	69.220	ENSXETG00000018654	prpf3	100	70.213	Xenopus_tropicalis
ENSORLG00015015016	prpf3	100	85.324	ENSXMAG00000016347	prpf3	100	86.043	Xiphophorus_maculatus