EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015015030 (Gene tree)
Gene ID: -
Gene Symbol: rbm28
Alias: -
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 6287 bases
Position: chr6:21569733-21576019
Accession: ZDB-GENE-040426-960
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015031006	RRM_1	PF00076.22	5.2e-58	1	3
ENSORLP00015031006	RRM_1	PF00076.22	5.2e-58	2	3
ENSORLP00015031006	RRM_1	PF00076.22	5.2e-58	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015021723	-	1929	-	ENSORLP00015031006	642 (aa)	-	-

Gene Model

Click here to download ENSORLG00015015030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015015030's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015015030	rbm28	97	60.784	ENSG00000106344	RBM28	100	49.761	Homo_sapiens
ENSORLG00015015030	rbm28	96	78.922	ENSAPOG00000015512	rbm28	85	78.922	Acanthochromis_polyacanthus
ENSORLG00015015030	rbm28	93	73.913	ENSAMEG00000004776	RBM28	75	73.913	Ailuropoda_melanoleuca
ENSORLG00015015030	rbm28	62	73.399	ENSACIG00000023153	rbm28	91	73.399	Amphilophus_citrinellus
ENSORLG00015015030	rbm28	96	76.961	ENSAOCG00000000462	rbm28	85	78.922	Amphiprion_ocellaris
ENSORLG00015015030	rbm28	96	76.961	ENSAPEG00000012996	rbm28	85	78.922	Amphiprion_percula
ENSORLG00015015030	rbm28	98	75.980	ENSATEG00000001672	rbm28	87	75.980	Anabas_testudineus
ENSORLG00015015030	rbm28	99	56.410	ENSANAG00000033922	RBM28	99	56.410	Aotus_nancymaae
ENSORLG00015015030	rbm28	98	72.195	ENSACLG00000025024	rbm28	86	71.366	Astatotilapia_calliptera
ENSORLG00015015030	rbm28	65	62.911	ENSAMXG00000000763	rbm28	99	63.615	Astyanax_mexicanus
ENSORLG00015015030	rbm28	97	60.680	ENSBTAG00000017001	RBM28	78	72.222	Bos_taurus
ENSORLG00015015030	rbm28	99	55.983	ENSCJAG00000017731	RBM28	99	55.983	Callithrix_jacchus
ENSORLG00015015030	rbm28	98	59.223	ENSCAFG00000001667	RBM28	99	60.766	Canis_familiaris
ENSORLG00015015030	rbm28	98	59.223	ENSCAFG00020021648	RBM28	99	60.766	Canis_lupus_dingo
ENSORLG00015015030	rbm28	97	60.680	ENSCHIG00000014146	RBM28	86	60.766	Capra_hircus
ENSORLG00015015030	rbm28	98	58.937	ENSTSYG00000002892	RBM28	86	59.048	Carlito_syrichta
ENSORLG00015015030	rbm28	72	77.215	ENSCAPG00000013218	RBM28	79	66.667	Cavia_aperea
ENSORLG00015015030	rbm28	97	60.294	ENSCPOG00000006253	RBM28	87	60.294	Cavia_porcellus
ENSORLG00015015030	rbm28	97	60.784	ENSCCAG00000035105	RBM28	99	60.784	Cebus_capucinus
ENSORLG00015015030	rbm28	97	59.606	ENSCATG00000040497	RBM28	80	67.500	Cercocebus_atys
ENSORLG00015015030	rbm28	98	56.180	ENSCLAG00000003707	RBM28	86	56.180	Chinchilla_lanigera
ENSORLG00015015030	rbm28	97	59.804	ENSCSAG00000010161	RBM28	99	61.165	Chlorocebus_sabaeus
ENSORLG00015015030	rbm28	64	54.331	ENSCHOG00000001994	-	63	54.331	Choloepus_hoffmanni
ENSORLG00015015030	rbm28	52	61.151	ENSCPBG00000018088	RBM28	61	61.151	Chrysemys_picta_bellii
ENSORLG00015015030	rbm28	88	60.000	ENSCING00000009238	-	79	60.000	Ciona_intestinalis
ENSORLG00015015030	rbm28	52	55.789	ENSCSAVG00000007149	-	96	55.789	Ciona_savignyi
ENSORLG00015015030	rbm28	97	60.294	ENSCANG00000038397	RBM28	99	61.165	Colobus_angolensis_palliatus
ENSORLG00015015030	rbm28	98	59.903	ENSCGRG00001021278	Rbm28	82	61.429	Cricetulus_griseus_chok1gshd
ENSORLG00015015030	rbm28	98	60.194	ENSCGRG00000005098	Rbm28	84	61.722	Cricetulus_griseus_crigri
ENSORLG00015015030	rbm28	98	68.599	ENSCSEG00000004212	rbm28	87	67.633	Cynoglossus_semilaevis
ENSORLG00015015030	rbm28	100	72.222	ENSCVAG00000010493	rbm28	86	72.222	Cyprinodon_variegatus
ENSORLG00015015030	rbm28	99	58.072	ENSDARG00000025332	rbm28	90	58.072	Danio_rerio
ENSORLG00015015030	rbm28	97	60.784	ENSDNOG00000001124	RBM28	84	60.784	Dasypus_novemcinctus
ENSORLG00015015030	rbm28	65	52.434	ENSDORG00000004184	Rbm28	86	55.656	Dipodomys_ordii
ENSORLG00015015030	rbm28	67	43.333	FBgn0260456	CG4806	80	43.333	Drosophila_melanogaster
ENSORLG00015015030	rbm28	93	60.000	ENSETEG00000007130	RBM28	82	61.084	Echinops_telfairi
ENSORLG00015015030	rbm28	99	41.379	ENSEBUG00000004419	rbm28	98	41.254	Eptatretus_burgeri
ENSORLG00015015030	rbm28	98	57.282	ENSEASG00005008528	RBM28	84	57.416	Equus_asinus_asinus
ENSORLG00015015030	rbm28	98	57.767	ENSECAG00000007745	RBM28	84	58.373	Equus_caballus
ENSORLG00015015030	rbm28	98	59.524	ENSEEUG00000002389	RBM28	99	60.000	Erinaceus_europaeus
ENSORLG00015015030	rbm28	99	66.500	ENSELUG00000020602	rbm28	85	66.500	Esox_lucius
ENSORLG00015015030	rbm28	98	59.709	ENSFCAG00000000946	RBM28	78	72.222	Felis_catus
ENSORLG00015015030	rbm28	97	57.971	ENSFDAG00000010169	RBM28	86	58.852	Fukomys_damarensis
ENSORLG00015015030	rbm28	97	63.776	ENSGMOG00000007091	rbm28	89	63.146	Gadus_morhua
ENSORLG00015015030	rbm28	68	67.819	ENSGAFG00000004802	rbm28	99	68.330	Gambusia_affinis
ENSORLG00015015030	rbm28	99	69.393	ENSGACG00000012612	rbm28	87	69.108	Gasterosteus_aculeatus
ENSORLG00015015030	rbm28	93	56.281	ENSGAGG00000008873	RBM28	86	56.281	Gopherus_agassizii
ENSORLG00015015030	rbm28	91	59.394	ENSGGOG00000004644	RBM28	81	61.078	Gorilla_gorilla
ENSORLG00015015030	rbm28	87	74.074	ENSHBUG00000009611	rbm28	81	74.745	Haplochromis_burtoni
ENSORLG00015015030	rbm28	97	58.454	ENSHGLG00000005409	RBM28	99	59.330	Heterocephalus_glaber_female
ENSORLG00015015030	rbm28	97	58.454	ENSHGLG00100016458	RBM28	99	59.330	Heterocephalus_glaber_male
ENSORLG00015015030	rbm28	96	57.292	ENSHCOG00000010597	rbm28	99	50.286	Hippocampus_comes
ENSORLG00015015030	rbm28	63	51.214	ENSIPUG00000007103	rbm28	81	51.582	Ictalurus_punctatus
ENSORLG00015015030	rbm28	98	57.488	ENSSTOG00000002169	RBM28	84	59.804	Ictidomys_tridecemlineatus
ENSORLG00015015030	rbm28	91	59.016	ENSJJAG00000022400	Rbm28	99	48.039	Jaculus_jaculus
ENSORLG00015015030	rbm28	97	71.292	ENSKMAG00000013348	rbm28	86	70.909	Kryptolebias_marmoratus
ENSORLG00015015030	rbm28	98	73.585	ENSLBEG00000012998	rbm28	85	73.585	Labrus_bergylta
ENSORLG00015015030	rbm28	72	58.065	ENSLACG00000010485	-	84	58.065	Latimeria_chalumnae
ENSORLG00015015030	rbm28	95	60.825	ENSLOCG00000015541	rbm28	76	61.340	Lepisosteus_oculatus
ENSORLG00015015030	rbm28	98	57.277	ENSLAFG00000010717	RBM28	86	59.259	Loxodonta_africana
ENSORLG00015015030	rbm28	97	59.804	ENSMFAG00000031036	RBM28	99	61.165	Macaca_fascicularis
ENSORLG00015015030	rbm28	97	59.804	ENSMMUG00000007250	RBM28	99	61.165	Macaca_mulatta
ENSORLG00015015030	rbm28	97	59.606	ENSMNEG00000036970	RBM28	99	60.294	Macaca_nemestrina
ENSORLG00015015030	rbm28	75	66.438	ENSMLEG00000037717	RBM28	95	61.165	Mandrillus_leucophaeus
ENSORLG00015015030	rbm28	98	72.072	ENSMAMG00000008525	rbm28	86	72.072	Mastacembelus_armatus
ENSORLG00015015030	rbm28	90	68.421	ENSMZEG00005019625	rbm28	85	71.366	Maylandia_zebra
ENSORLG00015015030	rbm28	98	60.952	ENSMAUG00000002263	Rbm28	83	61.429	Mesocricetus_auratus
ENSORLG00015015030	rbm28	89	60.265	ENSMICG00000000107	RBM28	81	60.265	Microcebus_murinus
ENSORLG00015015030	rbm28	98	59.903	ENSMOCG00000014615	Rbm28	86	61.905	Microtus_ochrogaster
ENSORLG00015015030	rbm28	65	68.258	ENSMMOG00000008600	rbm28	91	67.849	Mola_mola
ENSORLG00015015030	rbm28	98	55.378	ENSMODG00000015151	RBM28	86	54.955	Monodelphis_domestica
ENSORLG00015015030	rbm28	98	71.707	ENSMALG00000006419	rbm28	84	71.707	Monopterus_albus
ENSORLG00015015030	rbm28	99	59.420	MGP_CAROLIEiJ_G0028162	Rbm28	88	60.766	Mus_caroli
ENSORLG00015015030	rbm28	99	59.420	ENSMUSG00000029701	Rbm28	89	60.766	Mus_musculus
ENSORLG00015015030	rbm28	98	59.903	MGP_PahariEiJ_G0021920	Rbm28	88	61.244	Mus_pahari
ENSORLG00015015030	rbm28	99	59.903	MGP_SPRETEiJ_G0029162	Rbm28	89	61.244	Mus_spretus
ENSORLG00015015030	rbm28	98	60.194	ENSMPUG00000006511	RBM28	85	61.244	Mustela_putorius_furo
ENSORLG00015015030	rbm28	98	60.870	ENSMLUG00000002186	RBM28	84	60.870	Myotis_lucifugus
ENSORLG00015015030	rbm28	97	58.373	ENSNGAG00000017946	-	86	58.373	Nannospalax_galili
ENSORLG00015015030	rbm28	97	59.903	ENSNGAG00000006480	-	87	61.244	Nannospalax_galili
ENSORLG00015015030	rbm28	96	61.616	ENSNLEG00000012307	RBM28	76	72.222	Nomascus_leucogenys
ENSORLG00015015030	rbm28	91	59.281	ENSMEUG00000009611	RBM28	83	60.366	Notamacropus_eugenii
ENSORLG00015015030	rbm28	79	64.179	ENSOPRG00000015140	RBM28	67	63.768	Ochotona_princeps
ENSORLG00015015030	rbm28	84	56.614	ENSODEG00000013217	-	81	57.552	Octodon_degus
ENSORLG00015015030	rbm28	98	57.488	ENSODEG00000003213	-	85	58.373	Octodon_degus
ENSORLG00015015030	rbm28	98	71.707	ENSONIG00000014924	rbm28	87	71.778	Oreochromis_niloticus
ENSORLG00015015030	rbm28	97	59.135	ENSOANG00000000815	-	86	58.654	Ornithorhynchus_anatinus
ENSORLG00015015030	rbm28	98	58.738	ENSOCUG00000003009	RBM28	84	58.738	Oryctolagus_cuniculus
ENSORLG00015015030	rbm28	98	94.660	ENSORLG00000009636	rbm28	86	94.660	Oryzias_latipes
ENSORLG00015015030	rbm28	98	95.146	ENSORLG00020002123	rbm28	87	95.146	Oryzias_latipes_hni
ENSORLG00015015030	rbm28	98	88.780	ENSOMEG00000007801	rbm28	86	88.780	Oryzias_melastigma
ENSORLG00015015030	rbm28	71	65.000	ENSOGAG00000006011	RBM28	76	69.444	Otolemur_garnettii
ENSORLG00015015030	rbm28	97	60.386	ENSOARG00000002547	RBM28	86	59.615	Ovis_aries
ENSORLG00015015030	rbm28	97	60.784	ENSPPAG00000041730	RBM28	79	72.222	Pan_paniscus
ENSORLG00015015030	rbm28	98	59.223	ENSPPRG00000004420	RBM28	79	67.500	Panthera_pardus
ENSORLG00015015030	rbm28	98	59.223	ENSPTIG00000008550	RBM28	78	72.222	Panthera_tigris_altaica
ENSORLG00015015030	rbm28	97	60.784	ENSPTRG00000019659	RBM28	79	72.222	Pan_troglodytes
ENSORLG00015015030	rbm28	99	59.804	ENSPANG00000022295	RBM28	99	61.165	Papio_anubis
ENSORLG00015015030	rbm28	100	65.672	ENSPKIG00000023453	rbm28	87	65.672	Paramormyrops_kingsleyae
ENSORLG00015015030	rbm28	95	71.078	ENSPMGG00000012840	rbm28	99	63.284	Periophthalmus_magnuspinnatus
ENSORLG00015015030	rbm28	92	59.890	ENSPEMG00000020673	Rbm28	85	61.622	Peromyscus_maniculatus_bairdii
ENSORLG00015015030	rbm28	53	40.933	ENSPMAG00000002948	-	99	40.933	Petromyzon_marinus
ENSORLG00015015030	rbm28	97	57.820	ENSPCIG00000012810	RBM28	87	59.615	Phascolarctos_cinereus
ENSORLG00015015030	rbm28	99	71.429	ENSPFOG00000018209	rbm28	85	71.429	Poecilia_formosa
ENSORLG00015015030	rbm28	99	70.936	ENSPLAG00000016078	rbm28	82	70.936	Poecilia_latipinna
ENSORLG00015015030	rbm28	99	71.429	ENSPMEG00000004292	rbm28	85	71.429	Poecilia_mexicana
ENSORLG00015015030	rbm28	99	69.608	ENSPREG00000014287	rbm28	85	69.458	Poecilia_reticulata
ENSORLG00015015030	rbm28	97	60.784	ENSPPYG00000017975	RBM28	84	62.136	Pongo_abelii
ENSORLG00015015030	rbm28	84	51.977	ENSPCAG00000008223	RBM28	82	51.524	Procavia_capensis
ENSORLG00015015030	rbm28	97	57.895	ENSPCOG00000016797	RBM28	83	60.784	Propithecus_coquereli
ENSORLG00015015030	rbm28	85	63.184	ENSPVAG00000005443	RBM28	72	63.184	Pteropus_vampyrus
ENSORLG00015015030	rbm28	98	72.195	ENSPNYG00000014003	rbm28	86	71.586	Pundamilia_nyererei
ENSORLG00015015030	rbm28	99	59.024	ENSRNOG00000005468	Rbm28	88	60.870	Rattus_norvegicus
ENSORLG00015015030	rbm28	97	60.784	ENSRBIG00000033990	RBM28	99	62.136	Rhinopithecus_bieti
ENSORLG00015015030	rbm28	97	60.784	ENSRROG00000040747	RBM28	99	62.136	Rhinopithecus_roxellana
ENSORLG00015015030	rbm28	83	56.962	ENSSBOG00000012308	RBM28	99	57.919	Saimiri_boliviensis_boliviensis
ENSORLG00015015030	rbm28	93	54.494	ENSSHAG00000017017	RBM28	98	54.144	Sarcophilus_harrisii
ENSORLG00015015030	rbm28	99	61.848	ENSSFOG00015001231	rbm28	88	62.350	Scleropages_formosus
ENSORLG00015015030	rbm28	66	70.726	ENSSMAG00000003885	rbm28	90	70.726	Scophthalmus_maximus
ENSORLG00015015030	rbm28	66	72.124	ENSSDUG00000014270	rbm28	88	72.124	Seriola_dumerili
ENSORLG00015015030	rbm28	97	74.000	ENSSLDG00000020099	rbm28	84	74.000	Seriola_lalandi_dorsalis
ENSORLG00015015030	rbm28	83	59.030	ENSSARG00000008303	RBM28	78	59.367	Sorex_araneus
ENSORLG00015015030	rbm28	73	61.765	ENSSPUG00000000838	RBM28	92	45.391	Sphenodon_punctatus
ENSORLG00015015030	rbm28	88	75.658	ENSSPAG00000023305	rbm28	83	75.658	Stegastes_partitus
ENSORLG00015015030	rbm28	97	58.738	ENSSSCG00000031847	RBM28	85	60.287	Sus_scrofa
ENSORLG00015015030	rbm28	98	66.667	ENSTRUG00000013311	rbm28	84	66.667	Takifugu_rubripes
ENSORLG00015015030	rbm28	98	64.944	ENSTNIG00000017962	rbm28	86	64.944	Tetraodon_nigroviridis
ENSORLG00015015030	rbm28	77	57.235	ENSTBEG00000012749	RBM28	69	57.453	Tupaia_belangeri
ENSORLG00015015030	rbm28	96	60.488	ENSTTRG00000013647	RBM28	85	60.488	Tursiops_truncatus
ENSORLG00015015030	rbm28	98	60.194	ENSUAMG00000006949	RBM28	99	59.709	Ursus_americanus
ENSORLG00015015030	rbm28	98	60.194	ENSUMAG00000005997	RBM28	99	60.194	Ursus_maritimus
ENSORLG00015015030	rbm28	79	71.111	ENSVPAG00000008304	RBM28	70	70.652	Vicugna_pacos
ENSORLG00015015030	rbm28	98	59.223	ENSVVUG00000007270	RBM28	99	60.766	Vulpes_vulpes
ENSORLG00015015030	rbm28	99	61.765	ENSXETG00000009271	rbm28	99	50.000	Xenopus_tropicalis
ENSORLG00015015030	rbm28	65	66.897	ENSXCOG00000020357	rbm28	91	66.897	Xiphophorus_couchianus
ENSORLG00015015030	rbm28	99	70.936	ENSXMAG00000004415	rbm28	99	70.936	Xiphophorus_maculatus