EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015015143 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: THO complex subunit 4
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 3765 bases
Position: chr1:4009540-4013304
Accession: 101175372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015014206	RRM_1	PF00076.22	4.8e-16	1	1
ENSORLP00015014206	FYTT	PF07078.11	0.00053	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015021785	-	1338	XM_004065546	ENSORLP00015014206	251 (aa)	XP_004065594	-

Gene Model

Click here to download ENSORLG00015015143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015015143's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015015143	-	100	47.670	ENSORLG00015022664	alyref	100	48.148

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015015143	-	99	67.984	ENSAPOG00000000183	-	100	70.866	Acanthochromis_polyacanthus
ENSORLG00015015143	-	98	45.421	ENSACIG00000006351	alyref	97	48.162	Amphilophus_citrinellus
ENSORLG00015015143	-	98	63.469	ENSACIG00000020351	-	99	63.100	Amphilophus_citrinellus
ENSORLG00015015143	-	99	66.795	ENSAOCG00000019305	-	100	69.615	Amphiprion_ocellaris
ENSORLG00015015143	-	99	45.890	ENSAOCG00000014012	alyref	99	49.635	Amphiprion_ocellaris
ENSORLG00015015143	-	99	45.890	ENSAPEG00000014603	alyref	99	49.635	Amphiprion_percula
ENSORLG00015015143	-	99	66.409	ENSAPEG00000013527	-	100	69.231	Amphiprion_percula
ENSORLG00015015143	-	99	67.442	ENSATEG00000000382	-	100	67.308	Anabas_testudineus
ENSORLG00015015143	-	99	48.043	ENSATEG00000004307	alyref	99	49.466	Anabas_testudineus
ENSORLG00015015143	-	52	51.111	ENSAPLG00000014745	-	98	54.348	Anas_platyrhynchos
ENSORLG00015015143	-	99	67.300	ENSACLG00000010184	-	99	70.076	Astatotilapia_calliptera
ENSORLG00015015143	-	100	46.570	ENSACLG00000008432	alyref	100	48.746	Astatotilapia_calliptera
ENSORLG00015015143	-	100	46.996	ENSAMXG00000007359	alyref	100	48.789	Astyanax_mexicanus
ENSORLG00015015143	-	98	39.179	ENSCING00000013568	-	99	40.293	Ciona_intestinalis
ENSORLG00015015143	-	98	43.023	ENSCSAVG00000003324	-	99	43.798	Ciona_savignyi
ENSORLG00015015143	-	99	47.810	ENSCSEG00000017800	alyref	99	49.817	Cynoglossus_semilaevis
ENSORLG00015015143	-	99	49.446	ENSCVAG00000014869	alyref	99	50.365	Cyprinodon_variegatus
ENSORLG00015015143	-	100	66.797	ENSCVAG00000007789	-	100	70.703	Cyprinodon_variegatus
ENSORLG00015015143	-	99	47.203	ENSDARG00000077732	alyref	99	48.110	Danio_rerio
ENSORLG00015015143	-	96	40.569	FBgn0010774	Ref1	98	35.254	Drosophila_melanogaster
ENSORLG00015015143	-	100	40.234	ENSEBUG00000006305	alyref	100	41.699	Eptatretus_burgeri
ENSORLG00015015143	-	98	43.798	ENSEBUG00000008253	alyref	96	39.209	Eptatretus_burgeri
ENSORLG00015015143	-	98	48.443	ENSELUG00000017178	alyref	99	50.923	Esox_lucius
ENSORLG00015015143	-	98	52.308	ENSELUG00000008849	-	99	54.023	Esox_lucius
ENSORLG00015015143	-	58	56.954	ENSFALG00000011923	-	96	56.329	Ficedula_albicollis
ENSORLG00015015143	-	99	48.889	ENSFHEG00000019426	alyref	100	49.442	Fundulus_heteroclitus
ENSORLG00015015143	-	100	67.843	ENSFHEG00000004698	-	100	71.765	Fundulus_heteroclitus
ENSORLG00015015143	-	72	60.825	ENSGMOG00000013122	-	100	58.763	Gadus_morhua
ENSORLG00015015143	-	99	49.446	ENSGMOG00000009882	alyref	100	46.181	Gadus_morhua
ENSORLG00015015143	-	99	48.582	ENSGAFG00000006014	alyref	100	48.214	Gambusia_affinis
ENSORLG00015015143	-	100	67.323	ENSGAFG00000007573	-	100	67.717	Gambusia_affinis
ENSORLG00015015143	-	100	46.570	ENSHBUG00000020196	alyref	100	48.746	Haplochromis_burtoni
ENSORLG00015015143	-	99	67.293	ENSHBUG00000001454	-	99	68.539	Haplochromis_burtoni
ENSORLG00015015143	-	98	63.241	ENSHCOG00000012825	-	95	63.241	Hippocampus_comes
ENSORLG00015015143	-	98	48.897	ENSIPUG00000009469	alyref	99	49.123	Ictalurus_punctatus
ENSORLG00015015143	-	78	50.244	ENSSTOG00000016570	-	99	51.220	Ictidomys_tridecemlineatus
ENSORLG00015015143	-	99	69.170	ENSKMAG00000006462	-	99	71.937	Kryptolebias_marmoratus
ENSORLG00015015143	-	99	45.918	ENSKMAG00000008912	alyref	100	50.903	Kryptolebias_marmoratus
ENSORLG00015015143	-	97	53.629	ENSLBEG00000023118	alyref	88	54.000	Labrus_bergylta
ENSORLG00015015143	-	99	65.625	ENSLBEG00000012930	-	99	66.142	Labrus_bergylta
ENSORLG00015015143	-	100	65.074	ENSLBEG00000005387	-	100	64.706	Labrus_bergylta
ENSORLG00015015143	-	83	50.000	ENSLOCG00000013879	alyref	89	50.224	Lepisosteus_oculatus
ENSORLG00015015143	-	99	45.238	ENSMAMG00000003034	alyref	99	50.183	Mastacembelus_armatus
ENSORLG00015015143	-	99	66.797	ENSMAMG00000005464	-	100	66.537	Mastacembelus_armatus
ENSORLG00015015143	-	100	46.570	ENSMZEG00005008639	alyref	100	48.746	Maylandia_zebra
ENSORLG00015015143	-	99	66.920	ENSMZEG00005012096	-	99	69.697	Maylandia_zebra
ENSORLG00015015143	-	99	54.297	ENSMMOG00000007032	-	100	53.640	Mola_mola
ENSORLG00015015143	-	98	45.645	ENSMMOG00000012458	alyref	98	48.387	Mola_mola
ENSORLG00015015143	-	99	68.966	ENSMALG00000006054	-	100	67.176	Monopterus_albus
ENSORLG00015015143	-	75	49.744	ENSMLUG00000028605	-	98	42.446	Myotis_lucifugus
ENSORLG00015015143	-	97	44.118	ENSMLUG00000022178	-	98	43.066	Myotis_lucifugus
ENSORLG00015015143	-	100	43.525	ENSMLUG00000006521	-	100	43.772	Myotis_lucifugus
ENSORLG00015015143	-	75	52.332	ENSMLUG00000030671	-	98	46.182	Myotis_lucifugus
ENSORLG00015015143	-	100	43.643	ENSMLUG00000014372	-	100	46.454	Myotis_lucifugus
ENSORLG00015015143	-	100	43.253	ENSMLUG00000004098	-	100	47.059	Myotis_lucifugus
ENSORLG00015015143	-	97	46.125	ENSMLUG00000009247	-	98	44.649	Myotis_lucifugus
ENSORLG00015015143	-	97	43.262	ENSMLUG00000022467	-	98	41.812	Myotis_lucifugus
ENSORLG00015015143	-	100	48.106	ENSNGAG00000022014	-	100	49.451	Nannospalax_galili
ENSORLG00015015143	-	99	66.667	ENSNBRG00000017460	-	99	70.076	Neolamprologus_brichardi
ENSORLG00015015143	-	100	46.595	ENSNBRG00000001747	alyref	100	48.754	Neolamprologus_brichardi
ENSORLG00015015143	-	99	67.816	ENSONIG00000003296	-	99	69.466	Oreochromis_niloticus
ENSORLG00015015143	-	99	46.263	ENSONIG00000019434	alyref	100	48.214	Oreochromis_niloticus
ENSORLG00015015143	-	98	78.114	ENSORLG00000001620	-	88	78.114	Oryzias_latipes
ENSORLG00015015143	-	100	98.406	ENSORLG00020015673	-	100	98.406	Oryzias_latipes_hni
ENSORLG00015015143	-	100	47.331	ENSORLG00020011942	alyref	100	48.162	Oryzias_latipes_hni
ENSORLG00015015143	-	99	46.897	ENSOMEG00000019176	alyref	99	47.038	Oryzias_melastigma
ENSORLG00015015143	-	98	86.111	ENSOMEG00000007158	-	99	83.984	Oryzias_melastigma
ENSORLG00015015143	-	72	52.660	ENSPPAG00000036403	-	68	53.403	Pan_paniscus
ENSORLG00015015143	-	100	47.018	ENSPKIG00000007070	alyref	100	52.030	Paramormyrops_kingsleyae
ENSORLG00015015143	-	98	50.370	ENSPKIG00000006233	-	80	53.053	Paramormyrops_kingsleyae
ENSORLG00015015143	-	98	45.965	ENSPMGG00000016600	alyref	90	48.754	Periophthalmus_magnuspinnatus
ENSORLG00015015143	-	67	59.302	ENSPMGG00000012994	-	93	54.190	Periophthalmus_magnuspinnatus
ENSORLG00015015143	-	99	50.000	ENSPEMG00000016628	-	100	50.192	Peromyscus_maniculatus_bairdii
ENSORLG00015015143	-	99	45.051	ENSPFOG00000022825	alyref	99	47.331	Poecilia_formosa
ENSORLG00015015143	-	100	68.110	ENSPFOG00000017094	-	100	72.047	Poecilia_formosa
ENSORLG00015015143	-	99	45.205	ENSPLAG00000006948	alyref	100	47.500	Poecilia_latipinna
ENSORLG00015015143	-	100	68.110	ENSPLAG00000014380	-	100	72.047	Poecilia_latipinna
ENSORLG00015015143	-	99	45.051	ENSPMEG00000003547	alyref	100	48.214	Poecilia_mexicana
ENSORLG00015015143	-	100	68.110	ENSPMEG00000023039	-	100	72.047	Poecilia_mexicana
ENSORLG00015015143	-	99	45.205	ENSPREG00000015795	alyref	100	47.500	Poecilia_reticulata
ENSORLG00015015143	-	100	65.134	ENSPREG00000003649	-	100	68.199	Poecilia_reticulata
ENSORLG00015015143	-	100	46.570	ENSPNYG00000017498	alyref	100	48.746	Pundamilia_nyererei
ENSORLG00015015143	-	98	64.865	ENSPNYG00000002879	-	98	67.050	Pundamilia_nyererei
ENSORLG00015015143	-	100	46.786	ENSPNAG00000002531	alyref	100	47.687	Pygocentrus_nattereri
ENSORLG00015015143	-	92	46.800	ENSSBOG00000030924	-	84	52.792	Saimiri_boliviensis_boliviensis
ENSORLG00015015143	-	99	41.758	ENSSHAG00000000609	-	100	41.445	Sarcophilus_harrisii
ENSORLG00015015143	-	99	44.128	ENSSHAG00000012866	-	100	40.502	Sarcophilus_harrisii
ENSORLG00015015143	-	73	50.510	ENSSFOG00015003678	alyref	83	49.738	Scleropages_formosus
ENSORLG00015015143	-	83	55.238	ENSSFOG00015003923	alyref	75	54.018	Scleropages_formosus
ENSORLG00015015143	-	100	44.746	ENSSMAG00000009283	alyref	99	49.097	Scophthalmus_maximus
ENSORLG00015015143	-	100	68.199	ENSSMAG00000011169	-	100	69.847	Scophthalmus_maximus
ENSORLG00015015143	-	99	45.548	ENSSDUG00000016158	alyref	99	49.275	Seriola_dumerili
ENSORLG00015015143	-	99	43.345	ENSSLDG00000017803	alyref	99	47.826	Seriola_lalandi_dorsalis
ENSORLG00015015143	-	98	69.048	ENSSPAG00000017028	-	98	69.261	Stegastes_partitus
ENSORLG00015015143	-	100	61.049	ENSTRUG00000003051	-	100	58.608	Takifugu_rubripes
ENSORLG00015015143	-	99	46.931	ENSTNIG00000011595	alyref	99	49.421	Tetraodon_nigroviridis
ENSORLG00015015143	-	100	60.078	ENSTNIG00000014136	-	100	56.299	Tetraodon_nigroviridis
ENSORLG00015015143	-	75	52.551	ENSVVUG00000000272	-	82	53.807	Vulpes_vulpes
ENSORLG00015015143	-	98	48.201	ENSXCOG00000018047	alyref	99	47.500	Xiphophorus_couchianus
ENSORLG00015015143	-	99	68.235	ENSXMAG00000018086	-	100	71.094	Xiphophorus_maculatus
ENSORLG00015015143	-	98	48.201	ENSXMAG00000012218	alyref	99	47.500	Xiphophorus_maculatus