EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015015182 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 1567 bases
Position: chr10:8562815-8564381
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015014256	RRM_1	PF00076.22	5.4e-34	1	2
ENSORLP00015014256	RRM_1	PF00076.22	5.4e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015021841	-	693	-	ENSORLP00015014256	230 (aa)	-	-

Gene Model

Click here to download ENSORLG00015015182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015015182's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015015182	-	73	33.607	ENSORLG00015017343	tardbp	50	33.607
ENSORLG00015015182	-	92	99.398	ENSORLG00015015204	-	74	99.398
ENSORLG00015015182	-	94	86.111	ENSORLG00015017144	-	58	100.000
ENSORLG00015015182	-	98	89.778	ENSORLG00015016236	HNRNPA0	74	89.778
ENSORLG00015015182	-	92	38.636	ENSORLG00015014131	hnrnpabb	63	38.636
ENSORLG00015015182	-	82	35.417	ENSORLG00015003916	MSI1	60	35.417
ENSORLG00015015182	-	77	36.047	ENSORLG00015004592	msi2a	59	36.047
ENSORLG00015015182	-	77	52.809	ENSORLG00015022294	-	54	52.514
ENSORLG00015015182	-	77	34.706	ENSORLG00015002382	hnrnpd	78	34.682
ENSORLG00015015182	-	97	95.217	ENSORLG00015015185	-	78	95.217
ENSORLG00015015182	-	79	49.451	ENSORLG00015014774	hnrnpa3	54	49.451
ENSORLG00015015182	-	88	95.545	ENSORLG00015016507	-	63	95.545
ENSORLG00015015182	-	75	38.636	ENSORLG00015022877	hnrnpaba	62	38.636
ENSORLG00015015182	-	96	96.818	ENSORLG00015016169	HNRNPA0	74	96.818
ENSORLG00015015182	-	70	37.681	ENSORLG00015010143	elavl4	52	37.681
ENSORLG00015015182	-	77	57.865	ENSORLG00015016302	HNRNPA0	78	48.770
ENSORLG00015015182	-	97	94.643	ENSORLG00015016157	-	78	94.643
ENSORLG00015015182	-	90	33.051	ENSORLG00015005048	tardbpl	55	34.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015015182	-	77	61.932	ENSG00000177733	HNRNPA0	75	53.509	Homo_sapiens
ENSORLG00015015182	-	79	51.648	ENSAPOG00000014678	-	56	51.648	Acanthochromis_polyacanthus
ENSORLG00015015182	-	94	69.585	ENSAPOG00000003387	HNRNPA0	70	71.144	Acanthochromis_polyacanthus
ENSORLG00015015182	-	77	61.236	ENSAPOG00000003364	HNRNPA0	77	51.653	Acanthochromis_polyacanthus
ENSORLG00015015182	-	80	51.913	ENSAPOG00000003641	hnrnpa3	73	51.913	Acanthochromis_polyacanthus
ENSORLG00015015182	-	79	51.648	ENSAPOG00000003688	hnrnpa3	54	51.648	Acanthochromis_polyacanthus
ENSORLG00015015182	-	76	51.471	ENSAMEG00000004293	-	58	50.000	Ailuropoda_melanoleuca
ENSORLG00015015182	-	77	61.582	ENSAMEG00000016316	HNRNPA0	66	56.098	Ailuropoda_melanoleuca
ENSORLG00015015182	-	82	74.468	ENSACIG00000021834	HNRNPA0	89	72.277	Amphilophus_citrinellus
ENSORLG00015015182	-	79	51.648	ENSAOCG00000004095	hnrnpa3	53	51.648	Amphiprion_ocellaris
ENSORLG00015015182	-	79	51.648	ENSAPEG00000022522	hnrnpa3	53	51.648	Amphiprion_percula
ENSORLG00015015182	-	79	51.648	ENSATEG00000015304	hnrnpa3	56	51.648	Anabas_testudineus
ENSORLG00015015182	-	78	60.556	ENSATEG00000003526	-	95	60.556	Anabas_testudineus
ENSORLG00015015182	-	79	53.846	ENSACAG00000012234	-	52	53.846	Anolis_carolinensis
ENSORLG00015015182	-	77	61.582	ENSANAG00000017086	HNRNPA0	73	54.018	Aotus_nancymaae
ENSORLG00015015182	-	77	51.685	ENSANAG00000037918	-	50	51.099	Aotus_nancymaae
ENSORLG00015015182	-	87	63.184	ENSACLG00000008973	HNRNPA0	64	63.184	Astatotilapia_calliptera
ENSORLG00015015182	-	79	51.648	ENSACLG00000008532	hnrnpa3	54	51.648	Astatotilapia_calliptera
ENSORLG00015015182	-	79	53.297	ENSAMXG00000007065	hnrnpa3	51	53.297	Astyanax_mexicanus
ENSORLG00015015182	-	94	53.241	ENSBTAG00000016929	HNRNPA0	72	53.304	Bos_taurus
ENSORLG00015015182	-	77	61.582	ENSCJAG00000006112	HNRNPA0	75	53.509	Callithrix_jacchus
ENSORLG00015015182	-	79	50.549	ENSCJAG00000013830	-	54	47.980	Callithrix_jacchus
ENSORLG00015015182	-	77	61.582	ENSCAFG00000001132	HNRNPA0	66	56.373	Canis_familiaris
ENSORLG00015015182	-	77	61.582	ENSCAFG00020008142	HNRNPA0	66	56.373	Canis_lupus_dingo
ENSORLG00015015182	-	94	53.241	ENSCHIG00000002602	HNRNPA0	75	53.304	Capra_hircus
ENSORLG00015015182	-	77	61.798	ENSCPOG00000026092	HNRNPA0	74	54.464	Cavia_porcellus
ENSORLG00015015182	-	94	53.241	ENSCCAG00000010302	HNRNPA0	74	53.304	Cebus_capucinus
ENSORLG00015015182	-	77	61.932	ENSCATG00000021167	HNRNPA0	74	53.509	Cercocebus_atys
ENSORLG00015015182	-	77	61.582	ENSCLAG00000015132	HNRNPA0	63	61.111	Chinchilla_lanigera
ENSORLG00015015182	-	77	61.932	ENSCSAG00000000499	HNRNPA0	75	53.509	Chlorocebus_sabaeus
ENSORLG00015015182	-	77	61.582	ENSCPBG00000008738	HNRNPA0	75	52.838	Chrysemys_picta_bellii
ENSORLG00015015182	-	77	61.932	ENSCANG00000038062	HNRNPA0	74	53.509	Colobus_angolensis_palliatus
ENSORLG00015015182	-	77	61.798	ENSCGRG00001005548	Hnrnpa0	59	61.111	Cricetulus_griseus_chok1gshd
ENSORLG00015015182	-	79	42.857	ENSCGRG00001010070	-	58	42.857	Cricetulus_griseus_chok1gshd
ENSORLG00015015182	-	79	42.857	ENSCGRG00000007592	-	57	42.857	Cricetulus_griseus_crigri
ENSORLG00015015182	-	77	49.153	ENSCGRG00000003686	-	62	49.153	Cricetulus_griseus_crigri
ENSORLG00015015182	-	79	50.000	ENSCVAG00000018995	hnrnpa3	54	50.000	Cyprinodon_variegatus
ENSORLG00015015182	-	79	52.198	ENSDARG00000059351	hnrnpa3	79	52.198	Danio_rerio
ENSORLG00015015182	-	77	61.582	ENSDNOG00000030903	HNRNPA0	65	56.373	Dasypus_novemcinctus
ENSORLG00015015182	-	77	52.247	ENSDNOG00000031964	-	57	51.648	Dasypus_novemcinctus
ENSORLG00015015182	-	76	42.286	ENSETEG00000007747	-	72	38.462	Echinops_telfairi
ENSORLG00015015182	-	77	50.562	ENSEBUG00000009297	HNRNPA0	54	50.847	Eptatretus_burgeri
ENSORLG00015015182	-	76	50.857	ENSEBUG00000016570	HNRNPA0	52	50.857	Eptatretus_burgeri
ENSORLG00015015182	-	77	61.582	ENSECAG00000032164	HNRNPA0	75	53.778	Equus_caballus
ENSORLG00015015182	-	78	52.113	ENSELUG00000023080	hnrnpa3	62	50.549	Esox_lucius
ENSORLG00015015182	-	77	61.582	ENSFCAG00000040261	HNRNPA0	75	53.275	Felis_catus
ENSORLG00015015182	-	77	61.236	ENSFALG00000014395	HNRNPA0	59	58.824	Ficedula_albicollis
ENSORLG00015015182	-	92	36.652	ENSFDAG00000018739	-	63	40.223	Fukomys_damarensis
ENSORLG00015015182	-	77	61.798	ENSFDAG00000019780	HNRNPA0	75	61.111	Fukomys_damarensis
ENSORLG00015015182	-	77	45.506	ENSFDAG00000014067	-	53	45.055	Fukomys_damarensis
ENSORLG00015015182	-	82	67.725	ENSFHEG00000008384	HNRNPA0	93	67.725	Fundulus_heteroclitus
ENSORLG00015015182	-	77	58.427	ENSFHEG00000008390	HNRNPA0	54	57.377	Fundulus_heteroclitus
ENSORLG00015015182	-	79	64.641	ENSGMOG00000016232	HNRNPA0	68	62.176	Gadus_morhua
ENSORLG00015015182	-	77	61.236	ENSGALG00000006160	HNRNPA0	75	51.082	Gallus_gallus
ENSORLG00015015182	-	79	51.648	ENSGACG00000004477	hnrnpa3	63	51.648	Gasterosteus_aculeatus
ENSORLG00015015182	-	77	61.582	ENSGAGG00000005632	HNRNPA0	61	58.824	Gopherus_agassizii
ENSORLG00015015182	-	79	51.648	ENSHBUG00000019734	hnrnpa3	54	51.648	Haplochromis_burtoni
ENSORLG00015015182	-	82	74.468	ENSHBUG00000023868	HNRNPA0	75	73.196	Haplochromis_burtoni
ENSORLG00015015182	-	77	48.876	ENSHGLG00000014577	-	64	48.352	Heterocephalus_glaber_female
ENSORLG00015015182	-	77	61.798	ENSHGLG00000018216	HNRNPA0	68	56.863	Heterocephalus_glaber_female
ENSORLG00015015182	-	79	50.000	ENSHGLG00100001336	-	51	50.279	Heterocephalus_glaber_male
ENSORLG00015015182	-	79	52.747	ENSHGLG00100006677	-	50	53.073	Heterocephalus_glaber_male
ENSORLG00015015182	-	77	71.006	ENSHCOG00000007174	HNRNPA0	91	71.006	Hippocampus_comes
ENSORLG00015015182	-	93	46.460	ENSIPUG00000019815	RO32	71	46.460	Ictalurus_punctatus
ENSORLG00015015182	-	77	61.798	ENSJJAG00000006954	Hnrnpa0	66	58.549	Jaculus_jaculus
ENSORLG00015015182	-	79	51.099	ENSKMAG00000015973	hnrnpa3	56	51.099	Kryptolebias_marmoratus
ENSORLG00015015182	-	79	50.549	ENSLBEG00000016767	hnrnpa3	54	50.549	Labrus_bergylta
ENSORLG00015015182	-	79	58.011	ENSLACG00000014480	HNRNPA0	65	56.842	Latimeria_chalumnae
ENSORLG00015015182	-	78	53.073	ENSLOCG00000006986	hnrnpa3	57	50.000	Lepisosteus_oculatus
ENSORLG00015015182	-	77	52.809	ENSLOCG00000006476	-	62	44.783	Lepisosteus_oculatus
ENSORLG00015015182	-	83	46.354	ENSLAFG00000027712	-	50	52.980	Loxodonta_africana
ENSORLG00015015182	-	77	61.932	ENSMFAG00000030522	HNRNPA0	74	53.509	Macaca_fascicularis
ENSORLG00015015182	-	77	61.932	ENSMNEG00000015863	HNRNPA0	74	53.509	Macaca_nemestrina
ENSORLG00015015182	-	77	43.750	ENSMNEG00000038943	-	67	43.750	Macaca_nemestrina
ENSORLG00015015182	-	77	61.932	ENSMLEG00000026629	HNRNPA0	74	53.509	Mandrillus_leucophaeus
ENSORLG00015015182	-	87	71.642	ENSMAMG00000017754	HNRNPA0	79	71.642	Mastacembelus_armatus
ENSORLG00015015182	-	79	51.648	ENSMZEG00005004663	hnrnpa3	55	51.648	Maylandia_zebra
ENSORLG00015015182	-	87	63.184	ENSMZEG00005001055	HNRNPA0	64	63.184	Maylandia_zebra
ENSORLG00015015182	-	77	61.582	ENSMAUG00000018485	Hnrnpa0	60	61.111	Mesocricetus_auratus
ENSORLG00015015182	-	79	48.352	ENSMODG00000024570	-	51	48.352	Monodelphis_domestica
ENSORLG00015015182	-	77	61.932	ENSMODG00000014720	HNRNPA0	67	61.932	Monodelphis_domestica
ENSORLG00015015182	-	76	57.143	ENSMODG00000002463	-	95	57.143	Monodelphis_domestica
ENSORLG00015015182	-	79	51.099	ENSMALG00000009691	hnrnpa3	79	50.562	Monopterus_albus
ENSORLG00015015182	-	77	61.582	MGP_CAROLIEiJ_G0018593	Hnrnpa0	67	55.340	Mus_caroli
ENSORLG00015015182	-	77	61.582	ENSMUSG00000007836	Hnrnpa0	71	54.128	Mus_musculus
ENSORLG00015015182	-	77	61.582	MGP_PahariEiJ_G0019657	Hnrnpa0	64	58.247	Mus_pahari
ENSORLG00015015182	-	77	61.582	MGP_SPRETEiJ_G0019473	Hnrnpa0	74	52.889	Mus_spretus
ENSORLG00015015182	-	77	61.582	ENSMPUG00000019790	HNRNPA0	66	56.373	Mustela_putorius_furo
ENSORLG00015015182	-	77	61.582	ENSMLUG00000012683	-	73	53.778	Myotis_lucifugus
ENSORLG00015015182	-	77	60.227	ENSMLUG00000028644	-	72	49.367	Myotis_lucifugus
ENSORLG00015015182	-	94	53.704	ENSNGAG00000008883	Hnrnpa0	76	55.204	Nannospalax_galili
ENSORLG00015015182	-	77	61.932	ENSNLEG00000008518	HNRNPA0	73	53.509	Nomascus_leucogenys
ENSORLG00015015182	-	77	52.247	ENSNLEG00000027151	-	52	51.648	Nomascus_leucogenys
ENSORLG00015015182	-	77	61.582	ENSMEUG00000013675	HNRNPA0	67	56.098	Notamacropus_eugenii
ENSORLG00015015182	-	77	52.809	ENSODEG00000016578	-	57	52.198	Octodon_degus
ENSORLG00015015182	-	77	61.798	ENSODEG00000019566	HNRNPA0	76	53.712	Octodon_degus
ENSORLG00015015182	-	80	97.826	ENSORLG00000027074	-	81	97.826	Oryzias_latipes
ENSORLG00015015182	-	90	67.150	ENSORLG00000025332	-	68	68.657	Oryzias_latipes
ENSORLG00015015182	-	79	49.451	ENSORLG00000017561	hnrnpa3	54	49.451	Oryzias_latipes
ENSORLG00015015182	-	90	67.150	ENSORLG00000025015	-	68	68.657	Oryzias_latipes
ENSORLG00015015182	-	89	95.610	ENSORLG00020007505	-	68	95.610	Oryzias_latipes_hni
ENSORLG00015015182	-	79	50.000	ENSORLG00020020788	hnrnpa3	54	50.000	Oryzias_latipes_hni
ENSORLG00015015182	-	95	97.706	ENSORLG00020007109	-	72	97.706	Oryzias_latipes_hni
ENSORLG00015015182	-	90	70.000	ENSORLG00020022487	-	70	72.637	Oryzias_latipes_hni
ENSORLG00015015182	-	95	95.413	ENSORLG00020008203	-	73	95.413	Oryzias_latipes_hni
ENSORLG00015015182	-	79	50.549	ENSOMEG00000004838	hnrnpa3	54	50.549	Oryzias_melastigma
ENSORLG00015015182	-	77	61.582	ENSOGAG00000025754	HNRNPA0	76	60.556	Otolemur_garnettii
ENSORLG00015015182	-	77	61.582	ENSOARG00000015434	HNRNPA0	75	54.018	Ovis_aries
ENSORLG00015015182	-	77	61.932	ENSPPAG00000005303	HNRNPA0	73	53.509	Pan_paniscus
ENSORLG00015015182	-	77	61.582	ENSPPRG00000014655	HNRNPA0	75	53.509	Panthera_pardus
ENSORLG00015015182	-	77	61.932	ENSPTRG00000017273	HNRNPA0	73	53.509	Pan_troglodytes
ENSORLG00015015182	-	77	61.932	ENSPANG00000012900	HNRNPA0	74	53.509	Papio_anubis
ENSORLG00015015182	-	79	66.298	ENSPKIG00000020270	HNRNPA0	70	62.189	Paramormyrops_kingsleyae
ENSORLG00015015182	-	79	65.746	ENSPKIG00000020281	-	67	56.957	Paramormyrops_kingsleyae
ENSORLG00015015182	-	78	54.225	ENSPKIG00000022916	hnrnpa3	67	52.747	Paramormyrops_kingsleyae
ENSORLG00015015182	-	79	50.549	ENSPMGG00000000747	hnrnpa3	77	50.000	Periophthalmus_magnuspinnatus
ENSORLG00015015182	-	95	55.000	ENSPEMG00000020274	Hnrnpa0	88	51.570	Peromyscus_maniculatus_bairdii
ENSORLG00015015182	-	78	51.111	ENSPMAG00000004449	-	77	51.111	Petromyzon_marinus
ENSORLG00015015182	-	79	50.549	ENSPFOG00000014049	hnrnpa3	57	50.549	Poecilia_formosa
ENSORLG00015015182	-	75	59.064	ENSPLAG00000015223	-	70	57.955	Poecilia_latipinna
ENSORLG00015015182	-	80	70.652	ENSPMEG00000017025	HNRNPA0	99	70.652	Poecilia_mexicana
ENSORLG00015015182	-	79	50.549	ENSPMEG00000006390	hnrnpa3	57	50.549	Poecilia_mexicana
ENSORLG00015015182	-	93	45.116	ENSPREG00000005411	hnrnpa3	62	50.549	Poecilia_reticulata
ENSORLG00015015182	-	77	73.913	ENSPREG00000010619	HNRNPA0	76	73.913	Poecilia_reticulata
ENSORLG00015015182	-	77	52.247	ENSPPYG00000001012	-	59	51.648	Pongo_abelii
ENSORLG00015015182	-	67	52.288	ENSPPYG00000012967	-	66	50.311	Pongo_abelii
ENSORLG00015015182	-	77	61.932	ENSPPYG00000015814	HNRNPA0	75	53.509	Pongo_abelii
ENSORLG00015015182	-	93	46.047	ENSPNYG00000008424	hnrnpa3	79	50.549	Pundamilia_nyererei
ENSORLG00015015182	-	79	64.088	ENSPNAG00000023333	HNRNPA0	69	59.701	Pygocentrus_nattereri
ENSORLG00015015182	-	77	61.582	ENSRNOG00000039876	LOC681410	77	52.814	Rattus_norvegicus
ENSORLG00015015182	-	77	61.932	ENSRBIG00000023673	HNRNPA0	75	53.509	Rhinopithecus_bieti
ENSORLG00015015182	-	77	61.932	ENSRROG00000002558	HNRNPA0	75	53.509	Rhinopithecus_roxellana
ENSORLG00015015182	-	79	46.154	ENSRROG00000034643	-	50	46.369	Rhinopithecus_roxellana
ENSORLG00015015182	-	79	53.297	ENSSFOG00015001814	hnrnpa3	50	53.297	Scleropages_formosus
ENSORLG00015015182	-	78	65.363	ENSSFOG00015002650	HNRNPA0	58	65.385	Scleropages_formosus
ENSORLG00015015182	-	82	52.660	ENSSFOG00015016280	hnrnpa1	55	52.381	Scleropages_formosus
ENSORLG00015015182	-	79	51.099	ENSSDUG00000000381	hnrnpa3	60	51.099	Seriola_dumerili
ENSORLG00015015182	-	77	61.017	ENSSPUG00000016613	HNRNPA0	64	57.143	Sphenodon_punctatus
ENSORLG00015015182	-	79	51.648	ENSSPAG00000008969	hnrnpa3	56	51.648	Stegastes_partitus
ENSORLG00015015182	-	77	60.112	ENSSPAG00000001272	-	55	59.016	Stegastes_partitus
ENSORLG00015015182	-	77	43.750	ENSSSCG00000040926	-	54	43.931	Sus_scrofa
ENSORLG00015015182	-	79	42.857	ENSSSCG00000033635	-	54	43.931	Sus_scrofa
ENSORLG00015015182	-	79	39.891	ENSSSCG00000001098	-	60	37.445	Sus_scrofa
ENSORLG00015015182	-	77	57.303	ENSTGUG00000001186	HNRNPA0	59	56.284	Taeniopygia_guttata
ENSORLG00015015182	-	77	58.989	ENSTRUG00000021494	-	58	59.429	Takifugu_rubripes
ENSORLG00015015182	-	79	50.549	ENSTRUG00000017504	hnrnpa3	54	50.549	Takifugu_rubripes
ENSORLG00015015182	-	79	51.099	ENSTNIG00000016958	hnrnpa3	53	51.099	Tetraodon_nigroviridis
ENSORLG00015015182	-	77	61.582	ENSTTRG00000000499	HNRNPA0	67	56.373	Tursiops_truncatus
ENSORLG00015015182	-	77	61.582	ENSVVUG00000014736	HNRNPA0	66	56.373	Vulpes_vulpes
ENSORLG00015015182	-	79	53.846	ENSXETG00000001806	hnrnpa3	59	49.302	Xenopus_tropicalis
ENSORLG00015015182	-	78	59.218	ENSXETG00000003833	hnrnpa0	57	59.218	Xenopus_tropicalis
ENSORLG00015015182	-	77	58.427	ENSXMAG00000029150	HNRNPA0	59	57.377	Xiphophorus_maculatus
ENSORLG00015015182	-	79	50.549	ENSXMAG00000000439	hnrnpa3	56	50.549	Xiphophorus_maculatus
ENSORLG00015015182	-	80	70.492	ENSXMAG00000019804	HNRNPA0	97	70.492	Xiphophorus_maculatus