EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015015191 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171929
Alias: -
Full Name: zgc:171929
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 9366 bases
Position: chr14:12757297-12766662
Accession: ZDB-GENE-070820-19
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015031113	zf-C2H2	PF00096.26	2.8e-18	1	4
ENSORLP00015031113	zf-C2H2	PF00096.26	2.8e-18	2	4
ENSORLP00015031113	zf-C2H2	PF00096.26	2.8e-18	3	4
ENSORLP00015031113	zf-C2H2	PF00096.26	2.8e-18	4	4
ENSORLP00015014253	zf-C2H2	PF00096.26	4.5e-18	1	4
ENSORLP00015014253	zf-C2H2	PF00096.26	4.5e-18	2	4
ENSORLP00015014253	zf-C2H2	PF00096.26	4.5e-18	3	4
ENSORLP00015014253	zf-C2H2	PF00096.26	4.5e-18	4	4
ENSORLP00015031113	zf-met	PF12874.7	0.00036	1	1
ENSORLP00015014253	zf-met	PF12874.7	0.00043	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015021844	-	762	-	ENSORLP00015031113	253 (aa)	-	-
ENSORLT00015021826	-	807	-	ENSORLP00015014253	268 (aa)	-	-

Gene Model

Click here to download ENSORLG00015015191's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015015191's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015015191	zgc:171929	56	35.780	ENSORLG00015007128	-	89	37.662
ENSORLG00015015191	zgc:171929	91	41.772	ENSORLG00015016085	-	90	41.772
ENSORLG00015015191	zgc:171929	50	36.667	ENSORLG00015016704	-	59	36.667
ENSORLG00015015191	zgc:171929	55	38.393	ENSORLG00015007920	-	84	39.450
ENSORLG00015015191	zgc:171929	93	42.105	ENSORLG00015012776	-	84	43.243
ENSORLG00015015191	zgc:171929	69	40.594	ENSORLG00015007986	-	83	40.594
ENSORLG00015015191	zgc:171929	56	37.079	ENSORLG00015010853	-	80	37.079
ENSORLG00015015191	zgc:171929	81	41.818	ENSORLG00015009640	-	90	41.818
ENSORLG00015015191	zgc:171929	77	42.667	ENSORLG00015016420	-	87	51.020
ENSORLG00015015191	zgc:171929	60	38.235	ENSORLG00015019986	-	51	39.216
ENSORLG00015015191	zgc:171929	53	40.000	ENSORLG00015011236	-	51	40.000
ENSORLG00015015191	zgc:171929	58	40.984	ENSORLG00015011401	-	85	41.558
ENSORLG00015015191	zgc:171929	88	44.156	ENSORLG00015015776	-	85	37.190
ENSORLG00015015191	zgc:171929	83	40.278	ENSORLG00015009782	-	92	41.935
ENSORLG00015015191	zgc:171929	55	43.421	ENSORLG00015012339	-	82	43.421
ENSORLG00015015191	zgc:171929	56	46.939	ENSORLG00015000258	-	78	38.235
ENSORLG00015015191	zgc:171929	53	38.462	ENSORLG00015017097	-	60	38.462
ENSORLG00015015191	zgc:171929	58	37.179	ENSORLG00015017142	gfi1b	51	37.179
ENSORLG00015015191	zgc:171929	52	40.517	ENSORLG00015012052	-	89	40.517
ENSORLG00015015191	zgc:171929	90	45.882	ENSORLG00015014823	-	87	48.235
ENSORLG00015015191	zgc:171929	57	40.260	ENSORLG00015007742	-	67	37.069
ENSORLG00015015191	zgc:171929	53	41.558	ENSORLG00015011730	-	93	40.244
ENSORLG00015015191	zgc:171929	53	38.614	ENSORLG00015010765	-	52	39.474
ENSORLG00015015191	zgc:171929	58	37.615	ENSORLG00015007164	-	83	37.615
ENSORLG00015015191	zgc:171929	53	36.634	ENSORLG00015014056	-	100	36.634
ENSORLG00015015191	zgc:171929	53	41.333	ENSORLG00015018099	-	60	41.333
ENSORLG00015015191	zgc:171929	50	37.209	ENSORLG00015007132	-	56	37.209
ENSORLG00015015191	zgc:171929	52	42.188	ENSORLG00015014006	-	77	42.188
ENSORLG00015015191	zgc:171929	69	42.105	ENSORLG00015014015	-	87	42.857
ENSORLG00015015191	zgc:171929	57	38.889	ENSORLG00015010783	-	76	38.889
ENSORLG00015015191	zgc:171929	76	50.000	ENSORLG00015016741	-	97	43.269
ENSORLG00015015191	zgc:171929	68	42.500	ENSORLG00015008496	-	90	40.909
ENSORLG00015015191	zgc:171929	57	46.774	ENSORLG00015011871	-	92	38.776
ENSORLG00015015191	zgc:171929	60	38.095	ENSORLG00015012892	-	75	38.095
ENSORLG00015015191	zgc:171929	61	40.367	ENSORLG00015013962	-	65	40.367
ENSORLG00015015191	zgc:171929	83	41.558	ENSORLG00015010720	-	61	41.558

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015015191	zgc:171929	65	87.931	ENSAPOG00000006365	zgc:171929	79	87.931	Acanthochromis_polyacanthus
ENSORLG00015015191	zgc:171929	100	66.182	ENSAOCG00000010460	zgc:171929	98	66.182	Amphiprion_ocellaris
ENSORLG00015015191	zgc:171929	52	69.466	ENSAPLG00000016199	OVOL2	73	69.466	Anas_platyrhynchos
ENSORLG00015015191	zgc:171929	53	63.768	ENSACAG00000014216	OVOL2	54	63.768	Anolis_carolinensis
ENSORLG00015015191	zgc:171929	52	68.702	ENSTSYG00000012790	OVOL2	73	63.014	Carlito_syrichta
ENSORLG00015015191	zgc:171929	52	69.466	ENSCAPG00000005775	OVOL2	78	69.466	Cavia_aperea
ENSORLG00015015191	zgc:171929	96	45.122	ENSCPBG00000023454	OVOL2	92	45.122	Chrysemys_picta_bellii
ENSORLG00015015191	zgc:171929	57	64.384	ENSCANG00000033179	OVOL2	63	64.384	Colobus_angolensis_palliatus
ENSORLG00015015191	zgc:171929	100	65.091	ENSCVAG00000001397	zgc:171929	100	65.091	Cyprinodon_variegatus
ENSORLG00015015191	zgc:171929	53	67.391	ENSDORG00000016697	Ovol2	57	67.391	Dipodomys_ordii
ENSORLG00015015191	zgc:171929	100	53.741	ENSELUG00000020356	zgc:171929	99	54.082	Esox_lucius
ENSORLG00015015191	zgc:171929	52	69.466	ENSFDAG00000008730	OVOL2	78	69.466	Fukomys_damarensis
ENSORLG00015015191	zgc:171929	52	68.702	ENSGALG00000008702	OVOL2	50	68.702	Gallus_gallus
ENSORLG00015015191	zgc:171929	96	46.614	ENSGAGG00000020202	OVOL2	92	46.614	Gopherus_agassizii
ENSORLG00015015191	zgc:171929	52	86.364	ENSHCOG00000007100	zgc:171929	73	86.364	Hippocampus_comes
ENSORLG00015015191	zgc:171929	52	70.229	ENSJJAG00000014942	Ovol2	56	62.338	Jaculus_jaculus
ENSORLG00015015191	zgc:171929	100	65.233	ENSLBEG00000006082	zgc:171929	100	65.233	Labrus_bergylta
ENSORLG00015015191	zgc:171929	95	43.952	ENSLACG00000011247	OVOL2	91	43.952	Latimeria_chalumnae
ENSORLG00015015191	zgc:171929	100	68.284	ENSMAMG00000021196	zgc:171929	100	68.284	Mastacembelus_armatus
ENSORLG00015015191	zgc:171929	52	67.939	ENSMGAG00000006770	OVOL2	78	67.939	Meleagris_gallopavo
ENSORLG00015015191	zgc:171929	53	67.391	ENSMICG00000032455	OVOL2	50	67.391	Microcebus_murinus
ENSORLG00015015191	zgc:171929	53	68.421	ENSMODG00000005504	OVOL2	50	68.421	Monodelphis_domestica
ENSORLG00015015191	zgc:171929	52	69.466	MGP_CAROLIEiJ_G0024381	Ovol2	64	62.338	Mus_caroli
ENSORLG00015015191	zgc:171929	52	69.466	ENSMUSG00000037279	Ovol2	64	62.338	Mus_musculus
ENSORLG00015015191	zgc:171929	52	69.466	MGP_PahariEiJ_G0025825	Ovol2	54	69.466	Mus_pahari
ENSORLG00015015191	zgc:171929	52	69.466	MGP_SPRETEiJ_G0025300	Ovol2	64	62.338	Mus_spretus
ENSORLG00015015191	zgc:171929	52	68.702	ENSNGAG00000007174	Ovol2	54	68.702	Nannospalax_galili
ENSORLG00015015191	zgc:171929	100	67.537	ENSONIG00000004778	zgc:171929	100	67.537	Oreochromis_niloticus
ENSORLG00015015191	zgc:171929	53	68.421	ENSOANG00000001250	OVOL2	78	68.421	Ornithorhynchus_anatinus
ENSORLG00015015191	zgc:171929	52	68.702	ENSOCUG00000012116	OVOL2	52	68.702	Oryctolagus_cuniculus
ENSORLG00015015191	zgc:171929	52	68.702	ENSPPAG00000032300	OVOL2	77	56.069	Pan_paniscus
ENSORLG00015015191	zgc:171929	52	69.466	ENSPSIG00000006768	OVOL2	56	69.466	Pelodiscus_sinensis
ENSORLG00015015191	zgc:171929	61	89.610	ENSPMEG00000005347	zgc:171929	87	85.057	Poecilia_mexicana
ENSORLG00015015191	zgc:171929	53	67.391	ENSPCOG00000013518	OVOL2	50	67.391	Propithecus_coquereli
ENSORLG00015015191	zgc:171929	52	68.702	ENSPVAG00000001140	OVOL2	55	68.702	Pteropus_vampyrus
ENSORLG00015015191	zgc:171929	63	89.349	ENSSMAG00000003204	zgc:171929	72	89.349	Scophthalmus_maximus
ENSORLG00015015191	zgc:171929	52	69.466	ENSSARG00000006563	OVOL2	78	69.466	Sorex_araneus
ENSORLG00015015191	zgc:171929	52	68.702	ENSSPUG00000001720	OVOL2	67	68.702	Sphenodon_punctatus
ENSORLG00015015191	zgc:171929	63	91.124	ENSSPAG00000001700	zgc:171929	79	91.124	Stegastes_partitus
ENSORLG00015015191	zgc:171929	52	69.466	ENSTGUG00000005909	OVOL2	50	69.466	Taeniopygia_guttata
ENSORLG00015015191	zgc:171929	96	44.622	ENSXETG00000020587	ovol1	94	44.622	Xenopus_tropicalis
ENSORLG00015015191	zgc:171929	61	89.610	ENSXMAG00000022405	zgc:171929	84	84.483	Xiphophorus_maculatus