EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015015303 (Gene tree)
Gene ID: -
Gene Symbol: si:ch1073-296i8.2
Alias: -
Full Name: si:ch1073-296i8.2
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 3752 bases
Position: chr6:9731711-9735462
Accession: ZDB-GENE-110411-9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015031188	RNase_T	PF00929.24	5.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015021972	-	1585	-	ENSORLP00015031188	219 (aa)	-	-

Gene Model

Click here to download ENSORLG00015015303's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015015303's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015015303	si:ch1073-296i8.2	65	38.776	ENSORLG00015015284	-	59	38.776
ENSORLG00015015303	si:ch1073-296i8.2	65	39.860	ENSORLG00015015295	-	70	39.860

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015015303	si:ch1073-296i8.2	99	55.294	ENSAOCG00000011593	si:ch1073-296i8.2	90	55.294	Amphiprion_ocellaris
ENSORLG00015015303	si:ch1073-296i8.2	99	54.297	ENSAPEG00000012492	si:ch1073-296i8.2	90	54.297	Amphiprion_percula
ENSORLG00015015303	si:ch1073-296i8.2	84	40.860	ENSATEG00000021542	si:ch1073-385f13.3	94	40.860	Anabas_testudineus
ENSORLG00015015303	si:ch1073-296i8.2	95	71.292	ENSATEG00000021547	si:ch1073-296i8.2	82	71.292	Anabas_testudineus
ENSORLG00015015303	si:ch1073-296i8.2	80	42.938	ENSACLG00000023991	-	54	42.938	Astatotilapia_calliptera
ENSORLG00015015303	si:ch1073-296i8.2	89	40.404	ENSCVAG00000001533	-	96	40.404	Cyprinodon_variegatus
ENSORLG00015015303	si:ch1073-296i8.2	87	47.692	ENSDARG00000092584	si:ch1073-385f13.3	79	47.692	Danio_rerio
ENSORLG00015015303	si:ch1073-296i8.2	86	59.259	ENSDARG00000093773	si:ch1073-296i8.2	80	59.259	Danio_rerio
ENSORLG00015015303	si:ch1073-296i8.2	97	70.233	ENSFHEG00000018188	si:ch1073-296i8.2	87	70.233	Fundulus_heteroclitus
ENSORLG00015015303	si:ch1073-296i8.2	88	41.026	ENSFHEG00000018181	-	97	41.026	Fundulus_heteroclitus
ENSORLG00015015303	si:ch1073-296i8.2	83	46.995	ENSGMOG00000019565	-	96	46.995	Gadus_morhua
ENSORLG00015015303	si:ch1073-296i8.2	80	63.636	ENSGMOG00000019335	si:ch1073-296i8.2	99	63.636	Gadus_morhua
ENSORLG00015015303	si:ch1073-296i8.2	80	68.571	ENSGACG00000007185	si:ch1073-296i8.2	97	68.571	Gasterosteus_aculeatus
ENSORLG00015015303	si:ch1073-296i8.2	84	44.086	ENSHBUG00000007541	si:ch1073-385f13.3	94	44.086	Haplochromis_burtoni
ENSORLG00015015303	si:ch1073-296i8.2	92	59.204	ENSHCOG00000008574	si:ch1073-296i8.2	84	59.204	Hippocampus_comes
ENSORLG00015015303	si:ch1073-296i8.2	83	44.809	ENSKMAG00000015669	-	92	44.809	Kryptolebias_marmoratus
ENSORLG00015015303	si:ch1073-296i8.2	94	71.220	ENSKMAG00000015660	si:ch1073-296i8.2	92	71.220	Kryptolebias_marmoratus
ENSORLG00015015303	si:ch1073-296i8.2	87	61.780	ENSLBEG00000019623	si:ch1073-296i8.2	74	61.780	Labrus_bergylta
ENSORLG00015015303	si:ch1073-296i8.2	88	45.361	ENSLOCG00000014933	-	97	45.361	Lepisosteus_oculatus
ENSORLG00015015303	si:ch1073-296i8.2	79	44.318	ENSMAMG00000023075	si:ch1073-385f13.3	90	44.318	Mastacembelus_armatus
ENSORLG00015015303	si:ch1073-296i8.2	67	69.863	ENSMMOG00000018979	si:ch1073-296i8.2	69	69.863	Mola_mola
ENSORLG00015015303	si:ch1073-296i8.2	87	42.188	ENSMALG00000015952	si:ch1073-385f13.3	97	42.188	Monopterus_albus
ENSORLG00015015303	si:ch1073-296i8.2	84	45.699	ENSONIG00000012794	si:ch1073-385f13.3	94	45.699	Oreochromis_niloticus
ENSORLG00015015303	si:ch1073-296i8.2	100	96.818	ENSORLG00000023958	si:ch1073-296i8.2	100	96.818	Oryzias_latipes
ENSORLG00015015303	si:ch1073-296i8.2	87	41.451	ENSORLG00000030645	si:ch1073-385f13.3	86	41.451	Oryzias_latipes
ENSORLG00015015303	si:ch1073-296i8.2	84	42.162	ENSORLG00020021903	-	93	42.162	Oryzias_latipes_hni
ENSORLG00015015303	si:ch1073-296i8.2	100	95.909	ENSORLG00020021912	si:ch1073-296i8.2	100	95.909	Oryzias_latipes_hni
ENSORLG00015015303	si:ch1073-296i8.2	89	38.776	ENSPKIG00000023552	-	91	38.776	Paramormyrops_kingsleyae
ENSORLG00015015303	si:ch1073-296i8.2	86	38.220	ENSPFOG00000005521	si:ch1073-385f13.3	96	38.220	Poecilia_formosa
ENSORLG00015015303	si:ch1073-296i8.2	79	42.045	ENSPFOG00000021742	-	92	42.045	Poecilia_formosa
ENSORLG00015015303	si:ch1073-296i8.2	86	38.220	ENSPMEG00000013096	si:ch1073-385f13.3	96	38.220	Poecilia_mexicana
ENSORLG00015015303	si:ch1073-296i8.2	81	41.667	ENSPMEG00000013087	si:ch1073-385f13.3	93	41.667	Poecilia_mexicana
ENSORLG00015015303	si:ch1073-296i8.2	79	35.961	ENSPREG00000013537	-	76	35.961	Poecilia_reticulata
ENSORLG00015015303	si:ch1073-296i8.2	84	48.108	ENSPNAG00000018956	si:ch1073-385f13.3	98	48.108	Pygocentrus_nattereri
ENSORLG00015015303	si:ch1073-296i8.2	92	68.473	ENSSMAG00000004874	si:ch1073-296i8.2	82	66.981	Scophthalmus_maximus
ENSORLG00015015303	si:ch1073-296i8.2	84	46.237	ENSSLDG00000002379	si:ch1073-385f13.3	93	46.237	Seriola_lalandi_dorsalis
ENSORLG00015015303	si:ch1073-296i8.2	79	30.256	ENSSPUG00000012477	-	80	30.102	Sphenodon_punctatus
ENSORLG00015015303	si:ch1073-296i8.2	65	32.886	ENSSPUG00000015575	-	59	32.886	Sphenodon_punctatus
ENSORLG00015015303	si:ch1073-296i8.2	79	30.256	ENSSPUG00000012485	-	80	30.102	Sphenodon_punctatus
ENSORLG00015015303	si:ch1073-296i8.2	79	30.256	ENSSPUG00000012467	-	80	30.102	Sphenodon_punctatus
ENSORLG00015015303	si:ch1073-296i8.2	79	30.256	ENSSPUG00000012496	-	78	30.256	Sphenodon_punctatus
ENSORLG00015015303	si:ch1073-296i8.2	86	70.745	ENSSPAG00000012797	si:ch1073-296i8.2	96	70.745	Stegastes_partitus
ENSORLG00015015303	si:ch1073-296i8.2	94	63.902	ENSTNIG00000010399	si:ch1073-296i8.2	89	63.902	Tetraodon_nigroviridis
ENSORLG00015015303	si:ch1073-296i8.2	88	39.487	ENSXMAG00000021869	si:ch1073-385f13.3	98	39.487	Xiphophorus_maculatus