EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015015405 (Gene tree)
Gene ID: -
Gene Symbol: srpra
Alias: -
Full Name: SRP receptor subunit alpha
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 14865 bases
Position: chr13:29013395-29028259
Accession: ZDB-GENE-030219-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015014425	SRP54	PF00448.22	1e-47	1	1
ENSORLP00015014447	SRP54	PF00448.22	1e-47	1	1
ENSORLP00015014447	SRP54_N	PF02881.19	1.8e-10	1	1
ENSORLP00015014425	SRP54_N	PF02881.19	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015033485	-	1884	-	ENSORLP00015014425	627 (aa)	-	-
ENSORLT00015022099	-	7351	-	ENSORLP00015014447	643 (aa)	-	-

Gene Model

Click here to download ENSORLG00015015405's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015015405's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015015405	srpra	100	68.558	ENSG00000182934	SRPRA	100	67.638	Homo_sapiens
ENSORLG00015015405	srpra	100	85.692	ENSAPOG00000017588	srpra	100	86.462	Acanthochromis_polyacanthus
ENSORLG00015015405	srpra	100	68.405	ENSAMEG00000000117	SRPRA	100	67.331	Ailuropoda_melanoleuca
ENSORLG00015015405	srpra	100	80.923	ENSACIG00000021588	srpra	100	81.385	Amphilophus_citrinellus
ENSORLG00015015405	srpra	100	86.154	ENSAOCG00000018884	srpra	100	86.923	Amphiprion_ocellaris
ENSORLG00015015405	srpra	100	86.154	ENSAPEG00000022286	srpra	100	80.604	Amphiprion_percula
ENSORLG00015015405	srpra	100	82.236	ENSATEG00000023578	srpra	95	94.225	Anabas_testudineus
ENSORLG00015015405	srpra	94	71.311	ENSAPLG00000016079	SRPRA	99	70.772	Anas_platyrhynchos
ENSORLG00015015405	srpra	100	70.507	ENSACAG00000000108	SRPRA	100	70.661	Anolis_carolinensis
ENSORLG00015015405	srpra	100	67.945	ENSANAG00000020346	SRPRA	100	67.025	Aotus_nancymaae
ENSORLG00015015405	srpra	100	83.692	ENSACLG00000000518	srpra	100	83.538	Astatotilapia_calliptera
ENSORLG00015015405	srpra	100	74.801	ENSAMXG00000009975	srpra	100	74.801	Astyanax_mexicanus
ENSORLG00015015405	srpra	100	67.485	ENSBTAG00000014105	SRPRA	100	67.125	Bos_taurus
ENSORLG00015015405	srpra	99	48.930	WBGene00009521	F38A1.8	99	48.758	Caenorhabditis_elegans
ENSORLG00015015405	srpra	100	67.846	ENSCJAG00000008752	SRPRA	100	66.923	Callithrix_jacchus
ENSORLG00015015405	srpra	100	67.025	ENSCAFG00000010474	SRPRA	100	66.104	Canis_familiaris
ENSORLG00015015405	srpra	100	68.712	ENSCAFG00020010608	SRPRA	100	67.791	Canis_lupus_dingo
ENSORLG00015015405	srpra	100	68.550	ENSCHIG00000012423	SRPRA	100	66.462	Capra_hircus
ENSORLG00015015405	srpra	94	79.781	ENSTSYG00000005187	SRPRA	100	62.102	Carlito_syrichta
ENSORLG00015015405	srpra	95	64.773	ENSCAPG00000007098	SRPRA	91	88.722	Cavia_aperea
ENSORLG00015015405	srpra	100	69.018	ENSCPOG00000014976	SRPRA	91	88.722	Cavia_porcellus
ENSORLG00015015405	srpra	100	68.098	ENSCCAG00000025602	SRPRA	100	67.178	Cebus_capucinus
ENSORLG00015015405	srpra	100	68.405	ENSCATG00000039354	SRPRA	100	67.485	Cercocebus_atys
ENSORLG00015015405	srpra	100	68.865	ENSCLAG00000016839	SRPRA	100	67.945	Chinchilla_lanigera
ENSORLG00015015405	srpra	100	68.252	ENSCSAG00000002271	SRPRA	100	67.331	Chlorocebus_sabaeus
ENSORLG00015015405	srpra	54	86.735	ENSCHOG00000010015	-	71	86.735	Choloepus_hoffmanni
ENSORLG00015015405	srpra	100	70.336	ENSCPBG00000011128	SRPRA	100	70.031	Chrysemys_picta_bellii
ENSORLG00015015405	srpra	99	57.911	ENSCING00000008954	-	100	57.734	Ciona_intestinalis
ENSORLG00015015405	srpra	99	59.277	ENSCSAVG00000005602	-	100	59.277	Ciona_savignyi
ENSORLG00015015405	srpra	100	68.453	ENSCANG00000032337	SRPRA	100	67.534	Colobus_angolensis_palliatus
ENSORLG00015015405	srpra	100	68.971	ENSCGRG00001017670	Srpr	100	68.049	Cricetulus_griseus_chok1gshd
ENSORLG00015015405	srpra	100	68.971	ENSCGRG00000009892	Srpr	90	88.889	Cricetulus_griseus_crigri
ENSORLG00015015405	srpra	100	83.282	ENSCSEG00000002374	srpra	100	82.975	Cynoglossus_semilaevis
ENSORLG00015015405	srpra	100	82.362	ENSCVAG00000019881	srpra	100	82.362	Cyprinodon_variegatus
ENSORLG00015015405	srpra	100	77.573	ENSDARG00000061124	srpra	100	77.573	Danio_rerio
ENSORLG00015015405	srpra	100	68.140	ENSDNOG00000010821	SRPRA	100	66.463	Dasypus_novemcinctus
ENSORLG00015015405	srpra	100	68.971	ENSDORG00000016719	Srpr	100	68.049	Dipodomys_ordii
ENSORLG00015015405	srpra	99	52.308	FBgn0010391	Gtp-bp	100	53.077	Drosophila_melanogaster
ENSORLG00015015405	srpra	100	67.023	ENSETEG00000013956	SRPRA	100	66.107	Echinops_telfairi
ENSORLG00015015405	srpra	62	71.649	ENSEBUG00000002602	srpra	92	70.864	Eptatretus_burgeri
ENSORLG00015015405	srpra	100	68.356	ENSEASG00005022980	SRPRA	100	66.564	Equus_asinus_asinus
ENSORLG00015015405	srpra	100	68.356	ENSECAG00000014692	SRPRA	100	66.667	Equus_caballus
ENSORLG00015015405	srpra	100	63.820	ENSEEUG00000007920	SRPRA	100	62.462	Erinaceus_europaeus
ENSORLG00015015405	srpra	100	83.436	ENSELUG00000017643	srpra	100	82.975	Esox_lucius
ENSORLG00015015405	srpra	100	68.760	ENSFCAG00000011274	-	100	67.278	Felis_catus
ENSORLG00015015405	srpra	80	63.118	ENSFCAG00000030894	-	99	61.217	Felis_catus
ENSORLG00015015405	srpra	99	67.551	ENSFALG00000005048	SRPRA	99	67.290	Ficedula_albicollis
ENSORLG00015015405	srpra	100	68.664	ENSFDAG00000016229	SRPRA	92	83.916	Fukomys_damarensis
ENSORLG00015015405	srpra	100	84.178	ENSFHEG00000016959	srpra	100	84.178	Fundulus_heteroclitus
ENSORLG00015015405	srpra	100	79.968	ENSGMOG00000013244	srpra	100	79.968	Gadus_morhua
ENSORLG00015015405	srpra	100	71.231	ENSGALG00000030759	SRPRA	100	70.661	Gallus_gallus
ENSORLG00015015405	srpra	100	85.008	ENSGAFG00000000453	srpra	100	85.162	Gambusia_affinis
ENSORLG00015015405	srpra	100	81.510	ENSGACG00000006550	srpra	100	81.202	Gasterosteus_aculeatus
ENSORLG00015015405	srpra	100	70.642	ENSGAGG00000021157	SRPRA	100	70.336	Gopherus_agassizii
ENSORLG00015015405	srpra	100	68.558	ENSGGOG00000012962	SRPRA	100	67.638	Gorilla_gorilla
ENSORLG00015015405	srpra	100	83.846	ENSHBUG00000000119	srpra	100	83.692	Haplochromis_burtoni
ENSORLG00015015405	srpra	100	68.356	ENSHGLG00000001597	SRPR	94	89.394	Heterocephalus_glaber_female
ENSORLG00015015405	srpra	100	68.356	ENSHGLG00100006449	SRPR	94	89.394	Heterocephalus_glaber_male
ENSORLG00015015405	srpra	100	81.442	ENSHCOG00000010749	srpra	100	81.902	Hippocampus_comes
ENSORLG00015015405	srpra	94	73.864	ENSIPUG00000000867	srpra	99	73.052	Ictalurus_punctatus
ENSORLG00015015405	srpra	100	68.252	ENSSTOG00000009897	SRPRA	100	67.331	Ictidomys_tridecemlineatus
ENSORLG00015015405	srpra	100	68.210	ENSJJAG00000020272	Srpr	100	67.077	Jaculus_jaculus
ENSORLG00015015405	srpra	100	83.103	ENSKMAG00000002280	srpra	100	83.103	Kryptolebias_marmoratus
ENSORLG00015015405	srpra	100	83.871	ENSLBEG00000009608	srpra	100	84.639	Labrus_bergylta
ENSORLG00015015405	srpra	100	69.832	ENSLACG00000017781	SRPRA	100	70.948	Latimeria_chalumnae
ENSORLG00015015405	srpra	100	76.067	ENSLOCG00000002733	srpra	100	74.810	Lepisosteus_oculatus
ENSORLG00015015405	srpra	100	67.492	ENSLAFG00000010252	SRPRA	100	67.075	Loxodonta_africana
ENSORLG00015015405	srpra	100	68.405	ENSMFAG00000032606	SRPRA	100	67.485	Macaca_fascicularis
ENSORLG00015015405	srpra	100	68.405	ENSMMUG00000007938	SRPRA	100	67.485	Macaca_mulatta
ENSORLG00015015405	srpra	100	68.654	ENSMNEG00000030709	SRPRA	100	67.737	Macaca_nemestrina
ENSORLG00015015405	srpra	100	68.405	ENSMLEG00000043404	SRPRA	100	67.485	Mandrillus_leucophaeus
ENSORLG00015015405	srpra	100	83.846	ENSMAMG00000000473	srpra	100	84.000	Mastacembelus_armatus
ENSORLG00015015405	srpra	100	83.692	ENSMZEG00005013432	srpra	100	83.538	Maylandia_zebra
ENSORLG00015015405	srpra	94	69.836	ENSMGAG00000000732	SRPRA	100	69.951	Meleagris_gallopavo
ENSORLG00015015405	srpra	100	68.971	ENSMAUG00000015648	Srpr	100	68.049	Mesocricetus_auratus
ENSORLG00015015405	srpra	100	68.462	ENSMICG00000015981	SRPRA	100	67.538	Microcebus_murinus
ENSORLG00015015405	srpra	100	68.356	ENSMOCG00000008311	Srpr	100	67.435	Microtus_ochrogaster
ENSORLG00015015405	srpra	100	78.247	ENSMMOG00000005019	srpra	100	78.247	Mola_mola
ENSORLG00015015405	srpra	100	67.747	ENSMODG00000004576	-	100	67.656	Monodelphis_domestica
ENSORLG00015015405	srpra	100	83.231	ENSMALG00000011343	srpra	100	84.154	Monopterus_albus
ENSORLG00015015405	srpra	100	68.462	MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	Mus_caroli
ENSORLG00015015405	srpra	100	68.510	ENSMUSG00000032042	Srpr	86	89.394	Mus_musculus
ENSORLG00015015405	srpra	100	68.510	MGP_PahariEiJ_G0014816	Srpr	86	89.394	Mus_pahari
ENSORLG00015015405	srpra	100	64.956	MGP_SPRETEiJ_G0033075	Srpr	100	64.076	Mus_spretus
ENSORLG00015015405	srpra	100	69.018	ENSMPUG00000006626	SRPRA	100	67.945	Mustela_putorius_furo
ENSORLG00015015405	srpra	100	68.056	ENSMLUG00000017334	SRPRA	100	67.130	Myotis_lucifugus
ENSORLG00015015405	srpra	100	68.203	ENSNGAG00000015686	Srpr	100	67.896	Nannospalax_galili
ENSORLG00015015405	srpra	100	82.923	ENSNBRG00000017311	srpra	100	82.923	Neolamprologus_brichardi
ENSORLG00015015405	srpra	99	65.379	ENSNLEG00000007467	SRPRA	100	67.258	Nomascus_leucogenys
ENSORLG00015015405	srpra	94	67.103	ENSMEUG00000004956	SRPRA	100	66.612	Notamacropus_eugenii
ENSORLG00015015405	srpra	100	64.526	ENSOPRG00000013160	SRPRA	100	63.609	Ochotona_princeps
ENSORLG00015015405	srpra	100	69.172	ENSODEG00000004730	SRPRA	100	68.837	Octodon_degus
ENSORLG00015015405	srpra	100	83.231	ENSONIG00000005324	srpra	100	83.538	Oreochromis_niloticus
ENSORLG00015015405	srpra	100	68.712	ENSOCUG00000017057	SRPRA	100	67.791	Oryctolagus_cuniculus
ENSORLG00015015405	srpra	100	98.911	ENSORLG00000014676	srpra	100	98.911	Oryzias_latipes
ENSORLG00015015405	srpra	100	99.378	ENSORLG00020009240	srpra	100	99.378	Oryzias_latipes_hni
ENSORLG00015015405	srpra	100	95.023	ENSOMEG00000005872	srpra	100	95.023	Oryzias_melastigma
ENSORLG00015015405	srpra	100	68.510	ENSOGAG00000008926	SRPRA	100	67.588	Otolemur_garnettii
ENSORLG00015015405	srpra	100	65.291	ENSOARG00000012397	SRPRA	100	64.012	Ovis_aries
ENSORLG00015015405	srpra	100	68.558	ENSPPAG00000030813	SRPRA	100	67.638	Pan_paniscus
ENSORLG00015015405	srpra	100	68.760	ENSPPRG00000001542	SRPRA	100	67.278	Panthera_pardus
ENSORLG00015015405	srpra	100	68.606	ENSPTIG00000006989	SRPRA	100	67.125	Panthera_tigris_altaica
ENSORLG00015015405	srpra	100	68.558	ENSPTRG00000028360	SRPRA	100	67.638	Pan_troglodytes
ENSORLG00015015405	srpra	100	68.405	ENSPANG00000010858	SRPRA	100	67.485	Papio_anubis
ENSORLG00015015405	srpra	100	74.848	ENSPKIG00000016106	srpra	100	75.269	Paramormyrops_kingsleyae
ENSORLG00015015405	srpra	94	70.752	ENSPSIG00000012009	SRPRA	100	69.771	Pelodiscus_sinensis
ENSORLG00015015405	srpra	100	78.858	ENSPMGG00000001393	srpra	100	79.102	Periophthalmus_magnuspinnatus
ENSORLG00015015405	srpra	100	68.817	ENSPEMG00000018279	Srpr	100	67.896	Peromyscus_maniculatus_bairdii
ENSORLG00015015405	srpra	99	62.615	ENSPMAG00000009559	srpra	99	63.553	Petromyzon_marinus
ENSORLG00015015405	srpra	100	67.381	ENSPCIG00000010207	SRPRA	100	67.442	Phascolarctos_cinereus
ENSORLG00015015405	srpra	100	84.923	ENSPFOG00000003114	srpra	100	85.385	Poecilia_formosa
ENSORLG00015015405	srpra	100	84.923	ENSPLAG00000007323	srpra	100	85.538	Poecilia_latipinna
ENSORLG00015015405	srpra	100	84.923	ENSPMEG00000015658	srpra	100	85.385	Poecilia_mexicana
ENSORLG00015015405	srpra	100	84.769	ENSPREG00000004937	srpra	100	85.385	Poecilia_reticulata
ENSORLG00015015405	srpra	89	86.842	ENSPPYG00000004045	SRPRA	100	86.842	Pongo_abelii
ENSORLG00015015405	srpra	62	90.698	ENSPCAG00000003801	-	61	90.698	Procavia_capensis
ENSORLG00015015405	srpra	100	68.615	ENSPCOG00000025726	SRPRA	100	67.692	Propithecus_coquereli
ENSORLG00015015405	srpra	100	68.664	ENSPVAG00000000993	SRPRA	100	67.588	Pteropus_vampyrus
ENSORLG00015015405	srpra	100	83.692	ENSPNYG00000012371	srpra	100	83.538	Pundamilia_nyererei
ENSORLG00015015405	srpra	100	78.582	ENSPNAG00000013476	srpra	100	77.112	Pygocentrus_nattereri
ENSORLG00015015405	srpra	100	68.664	ENSRNOG00000010543	Srpra	100	67.742	Rattus_norvegicus
ENSORLG00015015405	srpra	100	68.405	ENSRBIG00000008702	SRPRA	100	67.485	Rhinopithecus_bieti
ENSORLG00015015405	srpra	100	68.300	ENSRROG00000029494	SRPRA	100	67.381	Rhinopithecus_roxellana
ENSORLG00015015405	srpra	54	41.257	YDR292C	-	52	42.553	Saccharomyces_cerevisiae
ENSORLG00015015405	srpra	100	67.945	ENSSBOG00000035892	SRPRA	100	67.025	Saimiri_boliviensis_boliviensis
ENSORLG00015015405	srpra	94	67.103	ENSSHAG00000009168	SRPRA	100	66.391	Sarcophilus_harrisii
ENSORLG00015015405	srpra	100	73.726	ENSSFOG00015008837	srpra	100	74.682	Scleropages_formosus
ENSORLG00015015405	srpra	100	77.516	ENSSMAG00000002783	srpra	100	78.288	Scophthalmus_maximus
ENSORLG00015015405	srpra	100	84.356	ENSSDUG00000013920	srpra	100	78.831	Seriola_dumerili
ENSORLG00015015405	srpra	100	84.356	ENSSLDG00000008601	srpra	93	84.663	Seriola_lalandi_dorsalis
ENSORLG00015015405	srpra	81	82.927	ENSSARG00000012434	SRPRA	86	82.927	Sorex_araneus
ENSORLG00015015405	srpra	100	68.615	ENSSPUG00000018221	SRPRA	100	68.049	Sphenodon_punctatus
ENSORLG00015015405	srpra	100	86.196	ENSSPAG00000005103	srpra	100	86.656	Stegastes_partitus
ENSORLG00015015405	srpra	100	68.405	ENSSSCG00000015227	SRPRA	100	67.485	Sus_scrofa
ENSORLG00015015405	srpra	94	68.099	ENSTGUG00000000815	SRPRA	100	67.320	Taeniopygia_guttata
ENSORLG00015015405	srpra	100	82.481	ENSTRUG00000006856	srpra	100	82.636	Takifugu_rubripes
ENSORLG00015015405	srpra	100	77.812	ENSTNIG00000010316	srpra	100	77.812	Tetraodon_nigroviridis
ENSORLG00015015405	srpra	100	68.405	ENSTTRG00000001558	SRPRA	100	66.820	Tursiops_truncatus
ENSORLG00015015405	srpra	100	68.502	ENSUAMG00000005510	SRPRA	100	67.485	Ursus_americanus
ENSORLG00015015405	srpra	96	62.898	ENSUMAG00000002269	SRPRA	100	63.057	Ursus_maritimus
ENSORLG00015015405	srpra	69	90.698	ENSVPAG00000001077	SRPRA	75	90.698	Vicugna_pacos
ENSORLG00015015405	srpra	100	68.712	ENSVVUG00000020094	SRPRA	100	67.791	Vulpes_vulpes
ENSORLG00015015405	srpra	100	60.395	ENSXETG00000003920	srpra	100	61.246	Xenopus_tropicalis
ENSORLG00015015405	srpra	89	96.061	ENSXCOG00000001286	srpra	100	96.061	Xiphophorus_couchianus
ENSORLG00015015405	srpra	100	84.900	ENSXMAG00000028401	srpra	100	84.853	Xiphophorus_maculatus