EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015015410 (Gene tree)
Gene ID: -
Gene Symbol: rrp8
Alias: -
Full Name: ribosomal RNA processing 8
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 3802 bases
Position: chr13:10046062-10049863
Accession: ZDB-GENE-030131-8898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015014474	Methyltransf_8	PF05148.15	5e-91	1	1
ENSORLP00015014459	Methyltransf_8	PF05148.15	3.2e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015022122	-	1917	-	ENSORLP00015014474	558 (aa)	-	-
ENSORLT00015033496	-	1926	-	ENSORLP00015014459	561 (aa)	-	-

Gene Model

Click here to download ENSORLG00015015410's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015015410's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015015410	rrp8	99	62.347	ENSAPOG00000010806	rrp8	98	62.587	Acanthochromis_polyacanthus
ENSORLG00015015410	rrp8	99	62.347	ENSAPOG00000010798	-	98	62.587	Acanthochromis_polyacanthus
ENSORLG00015015410	rrp8	99	62.257	ENSAPOG00000008509	-	100	62.500	Acanthochromis_polyacanthus
ENSORLG00015015410	rrp8	93	55.388	ENSACIG00000019896	rrp8	99	56.711	Amphilophus_citrinellus
ENSORLG00015015410	rrp8	99	62.257	ENSAOCG00000008785	rrp8	100	62.324	Amphiprion_ocellaris
ENSORLG00015015410	rrp8	99	62.301	ENSAPEG00000008416	rrp8	100	62.324	Amphiprion_percula
ENSORLG00015015410	rrp8	92	59.023	ENSATEG00000014110	rrp8	99	58.569	Anabas_testudineus
ENSORLG00015015410	rrp8	99	61.854	ENSACLG00000002746	rrp8	100	61.497	Astatotilapia_calliptera
ENSORLG00015015410	rrp8	99	45.739	ENSAMXG00000005164	rrp8	100	45.043	Astyanax_mexicanus
ENSORLG00015015410	rrp8	76	40.281	ENSCSAVG00000006435	-	94	40.047	Ciona_savignyi
ENSORLG00015015410	rrp8	71	58.734	ENSCSEG00000007330	rrp8	100	58.481	Cynoglossus_semilaevis
ENSORLG00015015410	rrp8	99	55.282	ENSCVAG00000012032	rrp8	100	55.203	Cyprinodon_variegatus
ENSORLG00015015410	rrp8	93	48.491	ENSDARG00000071652	rrp8	80	74.775	Danio_rerio
ENSORLG00015015410	rrp8	54	50.974	ENSEASG00005001761	RRP8	77	63.303	Equus_asinus_asinus
ENSORLG00015015410	rrp8	99	46.721	ENSELUG00000008665	rrp8	100	47.377	Esox_lucius
ENSORLG00015015410	rrp8	76	46.991	ENSGMOG00000007188	rrp8	94	53.598	Gadus_morhua
ENSORLG00015015410	rrp8	86	54.618	ENSGAFG00000012331	rrp8	99	54.418	Gambusia_affinis
ENSORLG00015015410	rrp8	77	55.196	ENSGACG00000011343	rrp8	100	54.734	Gasterosteus_aculeatus
ENSORLG00015015410	rrp8	99	61.854	ENSHBUG00000017131	rrp8	100	61.497	Haplochromis_burtoni
ENSORLG00015015410	rrp8	99	50.444	ENSHCOG00000001293	rrp8	100	50.622	Hippocampus_comes
ENSORLG00015015410	rrp8	99	44.190	ENSIPUG00000017733	rrp8	100	42.958	Ictalurus_punctatus
ENSORLG00015015410	rrp8	60	47.143	ENSSTOG00000016272	RRP8	70	45.794	Ictidomys_tridecemlineatus
ENSORLG00015015410	rrp8	99	59.402	ENSKMAG00000009229	rrp8	100	58.875	Kryptolebias_marmoratus
ENSORLG00015015410	rrp8	69	60.465	ENSLBEG00000019937	rrp8	100	60.453	Labrus_bergylta
ENSORLG00015015410	rrp8	99	46.797	ENSLOCG00000009591	rrp8	100	46.797	Lepisosteus_oculatus
ENSORLG00015015410	rrp8	99	60.764	ENSMAMG00000009679	rrp8	100	60.243	Mastacembelus_armatus
ENSORLG00015015410	rrp8	99	61.854	ENSMZEG00005008926	rrp8	100	61.497	Maylandia_zebra
ENSORLG00015015410	rrp8	93	56.121	ENSMMOG00000015709	rrp8	99	56.955	Mola_mola
ENSORLG00015015410	rrp8	99	59.233	ENSMALG00000015984	rrp8	100	58.988	Monopterus_albus
ENSORLG00015015410	rrp8	57	49.530	ENSNGAG00000012450	Rrp8	58	50.179	Nannospalax_galili
ENSORLG00015015410	rrp8	74	63.121	ENSNBRG00000023416	rrp8	98	63.007	Neolamprologus_brichardi
ENSORLG00015015410	rrp8	73	57.143	ENSONIG00000016861	rrp8	96	55.448	Oreochromis_niloticus
ENSORLG00015015410	rrp8	100	96.416	ENSORLG00000004175	rrp8	100	96.416	Oryzias_latipes
ENSORLG00015015410	rrp8	100	97.491	ENSORLG00020011413	rrp8	100	97.491	Oryzias_latipes_hni
ENSORLG00015015410	rrp8	99	80.427	ENSOMEG00000003161	rrp8	100	80.605	Oryzias_melastigma
ENSORLG00015015410	rrp8	76	38.514	ENSOGAG00000007184	RRP8	96	38.994	Otolemur_garnettii
ENSORLG00015015410	rrp8	99	45.862	ENSPKIG00000024217	rrp8	100	45.517	Paramormyrops_kingsleyae
ENSORLG00015015410	rrp8	99	56.128	ENSPFOG00000007308	rrp8	100	55.417	Poecilia_formosa
ENSORLG00015015410	rrp8	99	56.838	ENSPLAG00000011349	rrp8	100	56.128	Poecilia_latipinna
ENSORLG00015015410	rrp8	99	56.661	ENSPMEG00000009888	rrp8	100	56.483	Poecilia_mexicana
ENSORLG00015015410	rrp8	86	52.823	ENSPREG00000008450	rrp8	99	53.414	Poecilia_reticulata
ENSORLG00015015410	rrp8	99	61.717	ENSPNYG00000002878	rrp8	100	61.580	Pundamilia_nyererei
ENSORLG00015015410	rrp8	99	46.842	ENSPNAG00000024779	rrp8	100	46.021	Pygocentrus_nattereri
ENSORLG00015015410	rrp8	99	47.332	ENSSFOG00015003917	rrp8	99	47.578	Scleropages_formosus
ENSORLG00015015410	rrp8	99	60.808	ENSSMAG00000004859	rrp8	100	60.281	Scophthalmus_maximus
ENSORLG00015015410	rrp8	99	61.831	ENSSDUG00000010477	rrp8	100	61.485	Seriola_dumerili
ENSORLG00015015410	rrp8	99	62.087	ENSSLDG00000000521	rrp8	100	61.913	Seriola_lalandi_dorsalis
ENSORLG00015015410	rrp8	69	63.750	ENSSPAG00000006664	rrp8	79	85.849	Stegastes_partitus
ENSORLG00015015410	rrp8	99	56.964	ENSTRUG00000021812	rrp8	100	57.219	Takifugu_rubripes
ENSORLG00015015410	rrp8	57	48.297	ENSVVUG00000024346	RRP8	51	60.268	Vulpes_vulpes
ENSORLG00015015410	rrp8	71	58.186	ENSXCOG00000006156	rrp8	100	58.186	Xiphophorus_couchianus
ENSORLG00015015410	rrp8	99	55.009	ENSXMAG00000005011	rrp8	100	55.793	Xiphophorus_maculatus