EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015015518 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 6662 bases
Position: chr16:19193258-19199919
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015014586	MMR_HSR1	PF01926.23	4.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015033546	-	2627	-	ENSORLP00015014586	200 (aa)	-	-
ENSORLT00015022281	-	2836	-	ENSORLP00015014595	240 (aa)	-	-

Gene Model

Click here to download ENSORLG00015015518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015015518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015015518	-	79	43.671	ENSORLG00015010161	RAB41	75	43.038
ENSORLG00015015518	-	86	50.000	ENSORLG00015007869	rab12	71	50.000
ENSORLG00015015518	-	89	56.180	ENSORLG00015010098	zgc:171927	84	56.180
ENSORLG00015015518	-	94	40.306	ENSORLG00015015327	rab33a	59	43.902
ENSORLG00015015518	-	93	44.624	ENSORLG00015010257	rab11a	87	44.624
ENSORLG00015015518	-	77	42.857	ENSORLG00015016047	zgc:101559	69	42.857
ENSORLG00015015518	-	87	38.150	ENSORLG00015004033	rab23	90	35.979
ENSORLG00015015518	-	90	56.425	ENSORLG00015000618	-	87	56.425
ENSORLG00015015518	-	61	30.303	ENSORLG00015022049	arfrp1	65	30.303
ENSORLG00015015518	-	85	36.842	ENSORLG00015008252	si:ch73-116o1.2	94	34.694
ENSORLG00015015518	-	88	38.547	ENSORLG00015006820	-	87	38.547
ENSORLG00015015518	-	86	44.509	ENSORLG00015003202	RAB39B	81	44.509
ENSORLG00015015518	-	85	45.349	ENSORLG00015022289	-	81	45.349
ENSORLG00015015518	-	73	42.568	ENSORLG00015012872	rab33ba	62	42.568
ENSORLG00015015518	-	81	35.185	ENSORLG00015003353	zgc:55558	86	35.185
ENSORLG00015015518	-	95	40.625	ENSORLG00015017737	rab5ab	89	40.625
ENSORLG00015015518	-	87	33.898	ENSORLG00015006780	-	93	33.898
ENSORLG00015015518	-	81	32.370	ENSORLG00015020495	rasl11a	68	32.370
ENSORLG00015015518	-	79	44.937	ENSORLG00015006970	rab6ba	76	44.937
ENSORLG00015015518	-	89	46.328	ENSORLG00015020972	rab30	87	46.328
ENSORLG00015015518	-	96	34.197	ENSORLG00015011467	kras	98	34.715
ENSORLG00015015518	-	78	35.032	ENSORLG00015002191	rheb	85	35.032
ENSORLG00015015518	-	90	44.751	ENSORLG00015004739	rab18a	88	44.751
ENSORLG00015015518	-	86	34.659	ENSORLG00015002284	rerg	86	34.659
ENSORLG00015015518	-	87	46.821	ENSORLG00015020173	rab11bb	79	46.821
ENSORLG00015015518	-	86	50.877	ENSORLG00015010042	rab35b	100	45.545
ENSORLG00015015518	-	97	37.561	ENSORLG00015012725	rab25a	67	37.561
ENSORLG00015015518	-	96	34.872	ENSORLG00015010289	rras	97	34.872
ENSORLG00015015518	-	87	43.103	ENSORLG00015013537	rab6bb	84	43.103
ENSORLG00015015518	-	97	39.423	ENSORLG00015000893	-	97	39.423
ENSORLG00015015518	-	87	46.821	ENSORLG00015016999	RAB11B	79	46.821
ENSORLG00015015518	-	84	48.810	ENSORLG00015014594	rab3db	77	48.235
ENSORLG00015015518	-	84	32.738	ENSORLG00015014268	rabl2	73	32.738
ENSORLG00015015518	-	88	53.143	ENSORLG00015013638	rab15	82	53.143
ENSORLG00015015518	-	92	43.523	ENSORLG00015016946	rab11ba	73	43.523
ENSORLG00015015518	-	88	38.547	ENSORLG00015002344	-	86	38.547
ENSORLG00015015518	-	79	40.000	ENSORLG00015014829	rab34a	60	40.000
ENSORLG00015015518	-	87	40.805	ENSORLG00015019569	rab25b	88	40.116
ENSORLG00015015518	-	86	54.386	ENSORLG00015004377	RAB15	82	54.386
ENSORLG00015015518	-	89	31.285	ENSORLG00015001298	rhebl1	95	31.285
ENSORLG00015015518	-	75	45.806	ENSORLG00015013453	-	64	45.806
ENSORLG00015015518	-	79	38.125	ENSORLG00015000584	rab34b	59	38.125
ENSORLG00015015518	-	96	33.673	ENSORLG00015015121	si:dkey-13a21.4	96	33.673
ENSORLG00015015518	-	83	38.235	ENSORLG00015004265	rab9b	81	38.235
ENSORLG00015015518	-	78	30.435	ENSORLG00015010005	dnajc27	59	30.435
ENSORLG00015015518	-	97	42.857	ENSORLG00015019591	rab11al	94	42.857
ENSORLG00015015518	-	98	54.229	ENSORLG00015010986	rab1ab	98	54.229
ENSORLG00015015518	-	94	41.053	ENSORLG00015006162	rab6a	91	41.053
ENSORLG00015015518	-	84	42.012	ENSORLG00015000142	si:dkey-34d22.5	77	42.012
ENSORLG00015015518	-	87	37.569	ENSORLG00015020441	-	88	37.569
ENSORLG00015015518	-	95	40.104	ENSORLG00015012854	rab5aa	89	40.104
ENSORLG00015015518	-	81	40.994	ENSORLG00015021900	rab5c	89	36.598
ENSORLG00015015518	-	69	30.435	ENSORLG00015002410	arl3	75	30.435
ENSORLG00015015518	-	84	47.619	ENSORLG00015020900	rab2a	79	47.619
ENSORLG00015015518	-	86	42.775	ENSORLG00015004273	rab42a	79	42.775
ENSORLG00015015518	-	95	43.229	ENSORLG00015007182	rab18b	93	43.229
ENSORLG00015015518	-	94	42.328	ENSORLG00015013564	-	94	42.246
ENSORLG00015015518	-	97	38.942	ENSORLG00015006881	rab14	96	38.942

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015015518	-	100	93.000	ENSAPOG00000001040	-	100	93.000	Acanthochromis_polyacanthus
ENSORLG00015015518	-	100	65.672	ENSACIG00000003157	-	100	65.672	Amphilophus_citrinellus
ENSORLG00015015518	-	100	93.000	ENSAOCG00000015908	-	100	93.000	Amphiprion_ocellaris
ENSORLG00015015518	-	100	93.000	ENSAPEG00000004121	-	100	93.000	Amphiprion_percula
ENSORLG00015015518	-	100	90.500	ENSATEG00000023662	-	100	90.500	Anabas_testudineus
ENSORLG00015015518	-	100	91.500	ENSACLG00000019643	-	100	91.500	Astatotilapia_calliptera
ENSORLG00015015518	-	100	88.500	ENSCVAG00000022649	-	100	88.500	Cyprinodon_variegatus
ENSORLG00015015518	-	86	72.093	ENSDARG00000103934	megf8	99	72.093	Danio_rerio
ENSORLG00015015518	-	100	88.000	ENSGAFG00000014787	-	100	88.000	Gambusia_affinis
ENSORLG00015015518	-	100	91.500	ENSHBUG00000003728	-	100	91.500	Haplochromis_burtoni
ENSORLG00015015518	-	100	91.500	ENSMZEG00005015817	-	100	91.500	Maylandia_zebra
ENSORLG00015015518	-	100	91.500	ENSMMOG00000003924	-	100	91.500	Mola_mola
ENSORLG00015015518	-	100	90.500	ENSMALG00000020807	-	100	90.500	Monopterus_albus
ENSORLG00015015518	-	54	87.963	ENSOPRG00000014416	-	100	87.963	Ochotona_princeps
ENSORLG00015015518	-	100	99.500	ENSORLG00000025395	-	100	99.500	Oryzias_latipes
ENSORLG00015015518	-	100	99.000	ENSORLG00020009535	-	100	99.000	Oryzias_latipes_hni
ENSORLG00015015518	-	100	85.572	ENSPKIG00000014528	-	100	85.572	Paramormyrops_kingsleyae
ENSORLG00015015518	-	100	88.500	ENSPFOG00000014418	-	100	88.500	Poecilia_formosa
ENSORLG00015015518	-	100	88.500	ENSPLAG00000003181	-	100	88.500	Poecilia_latipinna
ENSORLG00015015518	-	100	88.500	ENSPMEG00000022988	-	100	88.500	Poecilia_mexicana
ENSORLG00015015518	-	100	88.500	ENSPMEG00000008020	-	100	88.500	Poecilia_mexicana
ENSORLG00015015518	-	100	90.500	ENSPNYG00000004681	-	100	90.500	Pundamilia_nyererei
ENSORLG00015015518	-	100	88.500	ENSSFOG00015021754	rab13	100	88.500	Scleropages_formosus
ENSORLG00015015518	-	100	91.500	ENSSMAG00000016376	-	100	91.500	Scophthalmus_maximus
ENSORLG00015015518	-	100	65.534	ENSSMAG00000002569	-	100	65.534	Scophthalmus_maximus
ENSORLG00015015518	-	100	93.000	ENSSDUG00000006307	-	100	93.000	Seriola_dumerili
ENSORLG00015015518	-	100	93.000	ENSSLDG00000015823	-	100	93.000	Seriola_lalandi_dorsalis
ENSORLG00015015518	-	100	93.500	ENSSPAG00000022440	-	100	93.500	Stegastes_partitus
ENSORLG00015015518	-	100	90.000	ENSTNIG00000018319	-	100	90.000	Tetraodon_nigroviridis
ENSORLG00015015518	-	100	88.500	ENSXMAG00000016094	-	100	88.500	Xiphophorus_maculatus