EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015015551 (Gene tree)
Gene ID: -
Gene Symbol: cmss1
Alias: -
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 3804 bases
Position: chr21:9477575-9481378
Accession: ZDB-GENE-041010-146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015031339	CMS1	PF14617.6	2.4e-23	1	1
ENSORLP00015031339	DEAD	PF00270.29	7.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015033574	-	792	-	ENSORLP00015031339	263 (aa)	-	-

Gene Model

Click here to download ENSORLG00015015551's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015015551's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015015551	cmss1	75	56.436	ENSG00000184220	CMSS1	96	62.025	Homo_sapiens
ENSORLG00015015551	cmss1	76	73.892	ENSAPOG00000010604	cmss1	97	63.158	Acanthochromis_polyacanthus
ENSORLG00015015551	cmss1	75	57.635	ENSAMEG00000004092	CMSS1	78	57.143	Ailuropoda_melanoleuca
ENSORLG00015015551	cmss1	76	62.069	ENSACIG00000021854	cmss1	99	56.554	Amphilophus_citrinellus
ENSORLG00015015551	cmss1	76	74.384	ENSAOCG00000013361	cmss1	91	65.918	Amphiprion_ocellaris
ENSORLG00015015551	cmss1	76	74.384	ENSAPEG00000005829	cmss1	91	65.299	Amphiprion_percula
ENSORLG00015015551	cmss1	97	61.303	ENSATEG00000008209	cmss1	93	60.000	Anabas_testudineus
ENSORLG00015015551	cmss1	75	55.941	ENSAPLG00000010542	CMSS1	88	55.941	Anas_platyrhynchos
ENSORLG00015015551	cmss1	75	57.426	ENSACAG00000011065	CMSS1	74	57.426	Anolis_carolinensis
ENSORLG00015015551	cmss1	75	56.436	ENSANAG00000023565	CMSS1	77	56.436	Aotus_nancymaae
ENSORLG00015015551	cmss1	76	72.906	ENSACLG00000027294	cmss1	91	63.296	Astatotilapia_calliptera
ENSORLG00015015551	cmss1	75	57.000	ENSAMXG00000002046	cmss1	90	52.963	Astyanax_mexicanus
ENSORLG00015015551	cmss1	75	57.921	ENSBTAG00000013663	CMSS1	73	57.921	Bos_taurus
ENSORLG00015015551	cmss1	75	55.941	ENSCJAG00000000610	CMSS1	77	55.941	Callithrix_jacchus
ENSORLG00015015551	cmss1	75	57.921	ENSCAFG00000009230	CMSS1	73	57.921	Canis_familiaris
ENSORLG00015015551	cmss1	75	54.455	ENSCAFG00020024156	-	63	54.455	Canis_lupus_dingo
ENSORLG00015015551	cmss1	75	57.921	ENSCAFG00020009464	-	74	57.921	Canis_lupus_dingo
ENSORLG00015015551	cmss1	75	57.426	ENSCHIG00000013003	CMSS1	73	57.426	Capra_hircus
ENSORLG00015015551	cmss1	75	57.426	ENSTSYG00000009266	CMSS1	78	57.426	Carlito_syrichta
ENSORLG00015015551	cmss1	70	51.852	ENSCAPG00000013584	CMSS1	88	51.852	Cavia_aperea
ENSORLG00015015551	cmss1	75	58.000	ENSCPOG00000014680	CMSS1	72	58.416	Cavia_porcellus
ENSORLG00015015551	cmss1	75	56.436	ENSCCAG00000034685	CMSS1	77	56.436	Cebus_capucinus
ENSORLG00015015551	cmss1	75	57.426	ENSCATG00000031980	CMSS1	77	57.426	Cercocebus_atys
ENSORLG00015015551	cmss1	75	55.500	ENSCLAG00000011241	CMSS1	87	55.941	Chinchilla_lanigera
ENSORLG00015015551	cmss1	75	57.426	ENSCSAG00000006024	CMSS1	82	57.426	Chlorocebus_sabaeus
ENSORLG00015015551	cmss1	75	42.000	ENSCHOG00000012098	CMSS1	73	42.574	Choloepus_hoffmanni
ENSORLG00015015551	cmss1	72	40.816	ENSCING00000014848	-	99	40.642	Ciona_intestinalis
ENSORLG00015015551	cmss1	75	57.426	ENSCANG00000031337	CMSS1	77	57.426	Colobus_angolensis_palliatus
ENSORLG00015015551	cmss1	75	55.941	ENSCGRG00001014305	Cmss1	73	55.941	Cricetulus_griseus_chok1gshd
ENSORLG00015015551	cmss1	75	55.941	ENSCGRG00000006722	Cmss1	79	55.941	Cricetulus_griseus_crigri
ENSORLG00015015551	cmss1	76	67.980	ENSCSEG00000004958	cmss1	69	67.980	Cynoglossus_semilaevis
ENSORLG00015015551	cmss1	76	72.906	ENSCVAG00000005039	cmss1	92	63.433	Cyprinodon_variegatus
ENSORLG00015015551	cmss1	76	61.576	ENSDARG00000112579	cmss1	90	55.805	Danio_rerio
ENSORLG00015015551	cmss1	75	57.921	ENSDNOG00000040418	CMSS1	73	57.921	Dasypus_novemcinctus
ENSORLG00015015551	cmss1	75	55.500	ENSDORG00000010461	Cmss1	72	55.941	Dipodomys_ordii
ENSORLG00015015551	cmss1	75	56.000	ENSEASG00005010966	CMSS1	92	56.436	Equus_asinus_asinus
ENSORLG00015015551	cmss1	75	55.000	ENSECAG00000015662	CMSS1	89	55.446	Equus_caballus
ENSORLG00015015551	cmss1	75	40.500	ENSEEUG00000007624	-	73	42.079	Erinaceus_europaeus
ENSORLG00015015551	cmss1	76	62.562	ENSELUG00000019459	cmss1	68	62.562	Esox_lucius
ENSORLG00015015551	cmss1	75	57.500	ENSFCAG00000044577	CMSS1	72	57.921	Felis_catus
ENSORLG00015015551	cmss1	75	55.446	ENSFALG00000005816	CMSS1	85	55.446	Ficedula_albicollis
ENSORLG00015015551	cmss1	75	58.049	ENSFDAG00000012577	CMSS1	89	56.931	Fukomys_damarensis
ENSORLG00015015551	cmss1	76	72.414	ENSFHEG00000012008	cmss1	84	72.414	Fundulus_heteroclitus
ENSORLG00015015551	cmss1	76	64.532	ENSGMOG00000016729	cmss1	94	55.056	Gadus_morhua
ENSORLG00015015551	cmss1	75	56.931	ENSGALG00000015267	CMSS1	77	56.931	Gallus_gallus
ENSORLG00015015551	cmss1	100	63.433	ENSGAFG00000021217	cmss1	99	63.806	Gambusia_affinis
ENSORLG00015015551	cmss1	76	68.966	ENSGACG00000002798	cmss1	90	61.024	Gasterosteus_aculeatus
ENSORLG00015015551	cmss1	75	55.941	ENSGAGG00000019861	CMSS1	79	55.941	Gopherus_agassizii
ENSORLG00015015551	cmss1	75	56.931	ENSGGOG00000014125	CMSS1	77	56.931	Gorilla_gorilla
ENSORLG00015015551	cmss1	100	64.045	ENSHBUG00000008431	cmss1	93	64.045	Haplochromis_burtoni
ENSORLG00015015551	cmss1	75	57.500	ENSHGLG00000019481	CMSS1	82	57.921	Heterocephalus_glaber_female
ENSORLG00015015551	cmss1	75	57.500	ENSHGLG00100010314	CMSS1	81	57.921	Heterocephalus_glaber_male
ENSORLG00015015551	cmss1	76	67.488	ENSHCOG00000003222	cmss1	69	67.488	Hippocampus_comes
ENSORLG00015015551	cmss1	76	63.054	ENSIPUG00000011591	cmss1	90	56.274	Ictalurus_punctatus
ENSORLG00015015551	cmss1	75	57.426	ENSSTOG00000019366	CMSS1	73	57.426	Ictidomys_tridecemlineatus
ENSORLG00015015551	cmss1	76	56.373	ENSJJAG00000014894	Cmss1	90	56.436	Jaculus_jaculus
ENSORLG00015015551	cmss1	76	62.069	ENSKMAG00000002390	cmss1	82	62.069	Kryptolebias_marmoratus
ENSORLG00015015551	cmss1	76	66.667	ENSLBEG00000006298	cmss1	99	56.929	Labrus_bergylta
ENSORLG00015015551	cmss1	75	60.099	ENSLACG00000009293	CMSS1	88	60.099	Latimeria_chalumnae
ENSORLG00015015551	cmss1	75	60.396	ENSLOCG00000009391	cmss1	91	54.104	Lepisosteus_oculatus
ENSORLG00015015551	cmss1	75	58.000	ENSLAFG00000017509	CMSS1	89	58.416	Loxodonta_africana
ENSORLG00015015551	cmss1	75	56.931	ENSMFAG00000045006	CMSS1	77	56.931	Macaca_fascicularis
ENSORLG00015015551	cmss1	75	56.436	ENSMMUG00000002939	CMSS1	85	55.729	Macaca_mulatta
ENSORLG00015015551	cmss1	75	56.931	ENSMNEG00000031315	CMSS1	77	56.931	Macaca_nemestrina
ENSORLG00015015551	cmss1	75	56.931	ENSMLEG00000033660	CMSS1	77	56.931	Mandrillus_leucophaeus
ENSORLG00015015551	cmss1	76	74.877	ENSMAMG00000017176	cmss1	93	64.103	Mastacembelus_armatus
ENSORLG00015015551	cmss1	76	72.906	ENSMZEG00005021886	cmss1	91	63.296	Maylandia_zebra
ENSORLG00015015551	cmss1	75	56.931	ENSMGAG00000014360	CMSS1	89	56.931	Meleagris_gallopavo
ENSORLG00015015551	cmss1	75	40.404	ENSMAUG00000020609	Cmss1	66	40.404	Mesocricetus_auratus
ENSORLG00015015551	cmss1	75	58.000	ENSMICG00000048977	CMSS1	78	58.416	Microcebus_murinus
ENSORLG00015015551	cmss1	75	55.446	ENSMOCG00000021937	Cmss1	73	55.446	Microtus_ochrogaster
ENSORLG00015015551	cmss1	76	68.966	ENSMMOG00000019794	cmss1	84	68.966	Mola_mola
ENSORLG00015015551	cmss1	75	57.426	ENSMODG00000002275	CMSS1	76	57.426	Monodelphis_domestica
ENSORLG00015015551	cmss1	97	64.615	ENSMALG00000004250	cmss1	88	64.231	Monopterus_albus
ENSORLG00015015551	cmss1	75	56.436	MGP_CAROLIEiJ_G0020824	Cmss1	73	56.436	Mus_caroli
ENSORLG00015015551	cmss1	75	55.941	ENSMUSG00000022748	Cmss1	73	55.941	Mus_musculus
ENSORLG00015015551	cmss1	75	56.436	MGP_PahariEiJ_G0016524	Cmss1	73	56.436	Mus_pahari
ENSORLG00015015551	cmss1	75	55.941	MGP_SPRETEiJ_G0021724	Cmss1	73	55.941	Mus_spretus
ENSORLG00015015551	cmss1	74	56.784	ENSMPUG00000011324	CMSS1	78	57.214	Mustela_putorius_furo
ENSORLG00015015551	cmss1	75	56.436	ENSMLUG00000001131	CMSS1	78	56.863	Myotis_lucifugus
ENSORLG00015015551	cmss1	75	54.950	ENSNGAG00000020316	Cmss1	72	54.950	Nannospalax_galili
ENSORLG00015015551	cmss1	76	72.414	ENSNBRG00000003095	cmss1	91	62.921	Neolamprologus_brichardi
ENSORLG00015015551	cmss1	75	57.000	ENSNLEG00000034172	CMSS1	77	57.426	Nomascus_leucogenys
ENSORLG00015015551	cmss1	75	48.020	ENSMEUG00000014505	CMSS1	89	48.020	Notamacropus_eugenii
ENSORLG00015015551	cmss1	75	56.931	ENSOPRG00000002986	CMSS1	73	56.931	Ochotona_princeps
ENSORLG00015015551	cmss1	75	58.000	ENSODEG00000005226	-	72	58.416	Octodon_degus
ENSORLG00015015551	cmss1	75	56.436	ENSODEG00000003558	-	75	56.436	Octodon_degus
ENSORLG00015015551	cmss1	75	51.515	ENSODEG00000001853	-	71	51.515	Octodon_degus
ENSORLG00015015551	cmss1	75	53.535	ENSODEG00000009446	-	78	53.535	Octodon_degus
ENSORLG00015015551	cmss1	76	72.906	ENSONIG00000006678	cmss1	100	64.015	Oreochromis_niloticus
ENSORLG00015015551	cmss1	78	56.459	ENSOANG00000007529	CMSS1	87	57.426	Ornithorhynchus_anatinus
ENSORLG00015015551	cmss1	75	57.426	ENSOCUG00000025366	CMSS1	73	57.426	Oryctolagus_cuniculus
ENSORLG00015015551	cmss1	99	82.197	ENSORLG00000020340	cmss1	92	82.397	Oryzias_latipes
ENSORLG00015015551	cmss1	100	81.749	ENSORLG00020012235	cmss1	99	81.749	Oryzias_latipes_hni
ENSORLG00015015551	cmss1	99	76.981	ENSOMEG00000012555	cmss1	91	76.866	Oryzias_melastigma
ENSORLG00015015551	cmss1	75	57.921	ENSOGAG00000002045	CMSS1	89	57.921	Otolemur_garnettii
ENSORLG00015015551	cmss1	75	56.650	ENSOARG00000017899	CMSS1	70	56.650	Ovis_aries
ENSORLG00015015551	cmss1	75	56.931	ENSPPAG00000038515	CMSS1	74	56.931	Pan_paniscus
ENSORLG00015015551	cmss1	75	57.500	ENSPPRG00000016767	CMSS1	72	57.921	Panthera_pardus
ENSORLG00015015551	cmss1	75	57.000	ENSPTIG00000018274	CMSS1	72	57.426	Panthera_tigris_altaica
ENSORLG00015015551	cmss1	75	56.931	ENSPTRG00000015157	CMSS1	82	56.931	Pan_troglodytes
ENSORLG00015015551	cmss1	75	57.426	ENSPANG00000019980	CMSS1	80	57.426	Papio_anubis
ENSORLG00015015551	cmss1	76	61.084	ENSPKIG00000012609	cmss1	97	54.647	Paramormyrops_kingsleyae
ENSORLG00015015551	cmss1	75	57.426	ENSPSIG00000003849	CMSS1	88	57.426	Pelodiscus_sinensis
ENSORLG00015015551	cmss1	76	69.608	ENSPMGG00000010286	cmss1	88	69.608	Periophthalmus_magnuspinnatus
ENSORLG00015015551	cmss1	75	57.921	ENSPEMG00000016384	Cmss1	72	57.921	Peromyscus_maniculatus_bairdii
ENSORLG00015015551	cmss1	76	47.059	ENSPMAG00000001146	cmss1	99	47.291	Petromyzon_marinus
ENSORLG00015015551	cmss1	75	58.416	ENSPCIG00000015656	CMSS1	77	58.416	Phascolarctos_cinereus
ENSORLG00015015551	cmss1	76	73.399	ENSPFOG00000016849	cmss1	93	63.569	Poecilia_formosa
ENSORLG00015015551	cmss1	76	72.906	ENSPLAG00000008323	cmss1	93	63.197	Poecilia_latipinna
ENSORLG00015015551	cmss1	76	73.892	ENSPMEG00000021020	cmss1	92	63.941	Poecilia_mexicana
ENSORLG00015015551	cmss1	98	63.910	ENSPREG00000007618	cmss1	90	63.333	Poecilia_reticulata
ENSORLG00015015551	cmss1	75	56.436	ENSPPYG00000013606	CMSS1	74	56.436	Pongo_abelii
ENSORLG00015015551	cmss1	75	58.000	ENSPCOG00000020035	CMSS1	78	58.416	Propithecus_coquereli
ENSORLG00015015551	cmss1	75	46.000	ENSPVAG00000017031	CMSS1	72	46.535	Pteropus_vampyrus
ENSORLG00015015551	cmss1	66	72.881	ENSPNYG00000013428	cmss1	88	62.241	Pundamilia_nyererei
ENSORLG00015015551	cmss1	99	54.717	ENSPNAG00000007912	cmss1	88	54.717	Pygocentrus_nattereri
ENSORLG00015015551	cmss1	75	55.941	ENSRNOG00000027888	Cmss1	79	55.941	Rattus_norvegicus
ENSORLG00015015551	cmss1	75	56.931	ENSRBIG00000037931	CMSS1	77	56.931	Rhinopithecus_bieti
ENSORLG00015015551	cmss1	75	56.931	ENSRROG00000042910	CMSS1	77	56.931	Rhinopithecus_roxellana
ENSORLG00015015551	cmss1	75	57.561	ENSSBOG00000030980	CMSS1	77	57.561	Saimiri_boliviensis_boliviensis
ENSORLG00015015551	cmss1	75	57.921	ENSSHAG00000009321	CMSS1	80	57.921	Sarcophilus_harrisii
ENSORLG00015015551	cmss1	76	65.025	ENSSFOG00015001509	cmss1	92	57.455	Scleropages_formosus
ENSORLG00015015551	cmss1	97	64.504	ENSSMAG00000001653	cmss1	91	63.838	Scophthalmus_maximus
ENSORLG00015015551	cmss1	99	67.293	ENSSDUG00000007719	cmss1	92	66.914	Seriola_dumerili
ENSORLG00015015551	cmss1	77	76.214	ENSSLDG00000012300	cmss1	92	64.000	Seriola_lalandi_dorsalis
ENSORLG00015015551	cmss1	75	45.545	ENSSARG00000003584	CMSS1	72	45.545	Sorex_araneus
ENSORLG00015015551	cmss1	75	54.950	ENSSPUG00000003865	CMSS1	89	54.950	Sphenodon_punctatus
ENSORLG00015015551	cmss1	100	62.731	ENSSPAG00000019182	cmss1	79	63.197	Stegastes_partitus
ENSORLG00015015551	cmss1	75	56.000	ENSSSCG00000011970	CMSS1	72	56.436	Sus_scrofa
ENSORLG00015015551	cmss1	75	55.446	ENSTGUG00000013635	CMSS1	88	55.446	Taeniopygia_guttata
ENSORLG00015015551	cmss1	100	61.338	ENSTRUG00000015265	cmss1	89	62.891	Takifugu_rubripes
ENSORLG00015015551	cmss1	76	63.547	ENSTNIG00000002880	cmss1	95	54.647	Tetraodon_nigroviridis
ENSORLG00015015551	cmss1	75	54.455	ENSTTRG00000001562	CMSS1	72	54.455	Tursiops_truncatus
ENSORLG00015015551	cmss1	75	57.921	ENSUAMG00000024209	CMSS1	91	57.921	Ursus_americanus
ENSORLG00015015551	cmss1	75	56.931	ENSUMAG00000001983	CMSS1	78	56.931	Ursus_maritimus
ENSORLG00015015551	cmss1	59	55.625	ENSVPAG00000000263	CMSS1	57	55.625	Vicugna_pacos
ENSORLG00015015551	cmss1	75	57.500	ENSVVUG00000021647	-	82	57.921	Vulpes_vulpes
ENSORLG00015015551	cmss1	75	56.931	ENSVVUG00000007776	-	80	56.931	Vulpes_vulpes
ENSORLG00015015551	cmss1	76	54.187	ENSXETG00000011858	cmss1	73	54.187	Xenopus_tropicalis
ENSORLG00015015551	cmss1	100	63.941	ENSXCOG00000018724	cmss1	91	63.469	Xiphophorus_couchianus
ENSORLG00015015551	cmss1	100	63.941	ENSXMAG00000011243	cmss1	99	63.469	Xiphophorus_maculatus