EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015015699 (Gene tree)
Gene ID: -
Gene Symbol: smfn
Alias: -
Full Name: small fragment nuclease
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 10926 bases
Position: chr14:12502659-12513584
Accession: ZDB-GENE-040426-1709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015031438	RNase_T	PF00929.24	6.3e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015022534	-	1810	-	ENSORLP00015031438	309 (aa)	-	-

Gene Model

Click here to download ENSORLG00015015699's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015015699's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015015699	smfn	66	79.612	ENSG00000076043	REXO2	98	81.622	Homo_sapiens
ENSORLG00015015699	smfn	66	80.097	ENSAMEG00000013263	REXO2	87	80.097	Ailuropoda_melanoleuca
ENSORLG00015015699	smfn	60	85.326	ENSACIG00000023553	smfn	99	85.326	Amphilophus_citrinellus
ENSORLG00015015699	smfn	85	69.962	ENSAPEG00000012435	smfn	96	69.962	Amphiprion_percula
ENSORLG00015015699	smfn	90	63.087	ENSATEG00000015385	smfn	97	68.100	Anabas_testudineus
ENSORLG00015015699	smfn	62	78.010	ENSAPLG00000005045	REXO2	93	78.010	Anas_platyrhynchos
ENSORLG00015015699	smfn	61	69.841	ENSACAG00000011631	REXO2	99	64.929	Anolis_carolinensis
ENSORLG00015015699	smfn	66	80.583	ENSANAG00000020834	REXO2	87	80.583	Aotus_nancymaae
ENSORLG00015015699	smfn	65	82.000	ENSACLG00000024566	smfn	95	83.978	Astatotilapia_calliptera
ENSORLG00015015699	smfn	66	80.097	ENSBTAG00000005843	REXO2	87	80.097	Bos_taurus
ENSORLG00015015699	smfn	60	47.568	WBGene00007429	C08B6.8	93	58.904	Caenorhabditis_elegans
ENSORLG00015015699	smfn	66	79.612	ENSCJAG00000012434	REXO2	87	79.612	Callithrix_jacchus
ENSORLG00015015699	smfn	66	79.126	ENSCAFG00000013511	REXO2	87	79.126	Canis_familiaris
ENSORLG00015015699	smfn	66	80.097	ENSCAFG00020002513	REXO2	87	80.097	Canis_lupus_dingo
ENSORLG00015015699	smfn	66	80.097	ENSCHIG00000009264	REXO2	87	80.097	Capra_hircus
ENSORLG00015015699	smfn	66	80.097	ENSTSYG00000002237	REXO2	87	80.097	Carlito_syrichta
ENSORLG00015015699	smfn	62	71.354	ENSTSYG00000027948	-	98	71.354	Carlito_syrichta
ENSORLG00015015699	smfn	60	82.703	ENSCAPG00000006093	REXO2	98	82.703	Cavia_aperea
ENSORLG00015015699	smfn	66	80.583	ENSCPOG00000010548	REXO2	87	80.583	Cavia_porcellus
ENSORLG00015015699	smfn	66	80.583	ENSCCAG00000034979	REXO2	87	80.583	Cebus_capucinus
ENSORLG00015015699	smfn	66	79.612	ENSCATG00000015278	REXO2	87	79.612	Cercocebus_atys
ENSORLG00015015699	smfn	66	80.000	ENSCLAG00000011195	REXO2	87	80.000	Chinchilla_lanigera
ENSORLG00015015699	smfn	66	79.612	ENSCSAG00000002754	REXO2	87	79.612	Chlorocebus_sabaeus
ENSORLG00015015699	smfn	66	79.126	ENSCHOG00000000642	-	87	79.126	Choloepus_hoffmanni
ENSORLG00015015699	smfn	59	57.143	ENSCING00000009858	-	88	57.143	Ciona_intestinalis
ENSORLG00015015699	smfn	66	79.612	ENSCANG00000034756	REXO2	87	79.612	Colobus_angolensis_palliatus
ENSORLG00015015699	smfn	77	72.385	ENSCGRG00001019814	-	97	72.996	Cricetulus_griseus_chok1gshd
ENSORLG00015015699	smfn	65	78.218	ENSCGRG00001010922	-	99	78.218	Cricetulus_griseus_chok1gshd
ENSORLG00015015699	smfn	65	79.703	ENSCGRG00001013673	-	99	79.703	Cricetulus_griseus_chok1gshd
ENSORLG00015015699	smfn	77	72.385	ENSCGRG00000006235	Rexo2	97	72.996	Cricetulus_griseus_crigri
ENSORLG00015015699	smfn	62	84.375	ENSCSEG00000007214	smfn	98	66.906	Cynoglossus_semilaevis
ENSORLG00015015699	smfn	59	80.328	ENSCVAG00000012008	smfn	99	80.328	Cyprinodon_variegatus
ENSORLG00015015699	smfn	62	83.333	ENSDARG00000009806	smfn	74	82.474	Danio_rerio
ENSORLG00015015699	smfn	58	82.873	ENSDNOG00000046533	REXO2	87	82.873	Dasypus_novemcinctus
ENSORLG00015015699	smfn	66	80.583	ENSDORG00000011255	Rexo2	87	80.583	Dipodomys_ordii
ENSORLG00015015699	smfn	62	63.542	ENSDORG00000025142	-	90	60.976	Dipodomys_ordii
ENSORLG00015015699	smfn	73	46.222	FBgn0039115	CG10214	99	46.222	Drosophila_melanogaster
ENSORLG00015015699	smfn	58	80.000	ENSEBUG00000013964	REXO2	62	80.000	Eptatretus_burgeri
ENSORLG00015015699	smfn	66	80.097	ENSEASG00005006674	REXO2	87	80.097	Equus_asinus_asinus
ENSORLG00015015699	smfn	66	80.097	ENSECAG00000005988	REXO2	87	80.097	Equus_caballus
ENSORLG00015015699	smfn	70	76.991	ENSELUG00000020072	smfn	78	76.991	Esox_lucius
ENSORLG00015015699	smfn	66	80.097	ENSFCAG00000018632	REXO2	87	80.097	Felis_catus
ENSORLG00015015699	smfn	60	78.495	ENSFALG00000010044	REXO2	92	78.495	Ficedula_albicollis
ENSORLG00015015699	smfn	66	80.583	ENSFDAG00000011764	REXO2	87	80.583	Fukomys_damarensis
ENSORLG00015015699	smfn	61	82.979	ENSGMOG00000006370	smfn	97	82.979	Gadus_morhua
ENSORLG00015015699	smfn	63	80.928	ENSGALG00000035980	REXO2	84	80.612	Gallus_gallus
ENSORLG00015015699	smfn	83	69.202	ENSGAFG00000015349	smfn	94	69.202	Gambusia_affinis
ENSORLG00015015699	smfn	63	81.538	ENSGACG00000020096	smfn	96	81.538	Gasterosteus_aculeatus
ENSORLG00015015699	smfn	66	76.471	ENSGAGG00000021126	REXO2	89	76.471	Gopherus_agassizii
ENSORLG00015015699	smfn	66	79.612	ENSGGOG00000023267	REXO2	87	79.612	Gorilla_gorilla
ENSORLG00015015699	smfn	65	59.204	ENSHBUG00000020097	REXO2	75	59.204	Haplochromis_burtoni
ENSORLG00015015699	smfn	66	80.097	ENSHGLG00000013556	REXO2	87	80.097	Heterocephalus_glaber_female
ENSORLG00015015699	smfn	66	80.583	ENSHGLG00100005257	REXO2	87	80.583	Heterocephalus_glaber_male
ENSORLG00015015699	smfn	58	78.333	ENSHCOG00000007122	smfn	98	78.333	Hippocampus_comes
ENSORLG00015015699	smfn	62	87.500	ENSIPUG00000020440	rexo2	76	82.126	Ictalurus_punctatus
ENSORLG00015015699	smfn	66	80.583	ENSSTOG00000012465	REXO2	87	80.583	Ictidomys_tridecemlineatus
ENSORLG00015015699	smfn	66	80.583	ENSJJAG00000013710	-	87	80.583	Jaculus_jaculus
ENSORLG00015015699	smfn	65	58.209	ENSJJAG00000022605	-	81	58.209	Jaculus_jaculus
ENSORLG00015015699	smfn	71	77.928	ENSKMAG00000016795	smfn	91	70.428	Kryptolebias_marmoratus
ENSORLG00015015699	smfn	60	85.326	ENSLBEG00000006021	smfn	97	85.326	Labrus_bergylta
ENSORLG00015015699	smfn	67	69.856	ENSLACG00000018623	REXO2	81	72.000	Latimeria_chalumnae
ENSORLG00015015699	smfn	63	86.224	ENSLOCG00000002389	smfn	93	86.224	Lepisosteus_oculatus
ENSORLG00015015699	smfn	63	82.143	ENSLAFG00000012451	REXO2	87	80.097	Loxodonta_africana
ENSORLG00015015699	smfn	66	79.612	ENSMFAG00000041155	REXO2	87	79.612	Macaca_fascicularis
ENSORLG00015015699	smfn	66	79.612	ENSMMUG00000012269	REXO2	87	79.612	Macaca_mulatta
ENSORLG00015015699	smfn	66	79.612	ENSMNEG00000033379	REXO2	87	79.612	Macaca_nemestrina
ENSORLG00015015699	smfn	66	79.612	ENSMLEG00000036571	REXO2	87	79.612	Mandrillus_leucophaeus
ENSORLG00015015699	smfn	65	84.080	ENSMAMG00000021209	smfn	72	84.080	Mastacembelus_armatus
ENSORLG00015015699	smfn	65	82.000	ENSMZEG00005023224	-	76	82.000	Maylandia_zebra
ENSORLG00015015699	smfn	65	82.000	ENSMZEG00005020730	REXO2	76	82.000	Maylandia_zebra
ENSORLG00015015699	smfn	51	78.125	ENSMGAG00000003026	REXO2	98	78.125	Meleagris_gallopavo
ENSORLG00015015699	smfn	77	72.385	ENSMAUG00000014576	Rexo2	97	72.996	Mesocricetus_auratus
ENSORLG00015015699	smfn	66	80.583	ENSMICG00000010094	REXO2	87	80.583	Microcebus_murinus
ENSORLG00015015699	smfn	76	72.574	ENSMOCG00000009016	Rexo2	97	72.574	Microtus_ochrogaster
ENSORLG00015015699	smfn	66	82.266	ENSMMOG00000006430	smfn	75	82.266	Mola_mola
ENSORLG00015015699	smfn	66	80.000	ENSMODG00000013913	REXO2	87	80.000	Monodelphis_domestica
ENSORLG00015015699	smfn	91	63.793	ENSMALG00000018130	smfn	79	64.336	Monopterus_albus
ENSORLG00015015699	smfn	67	77.990	MGP_CAROLIEiJ_G0032166	Rexo2	88	77.990	Mus_caroli
ENSORLG00015015699	smfn	67	77.990	ENSMUSG00000032026	Rexo2	88	77.990	Mus_musculus
ENSORLG00015015699	smfn	67	77.990	MGP_PahariEiJ_G0015034	Rexo2	88	77.990	Mus_pahari
ENSORLG00015015699	smfn	67	77.990	MGP_SPRETEiJ_G0033305	Rexo2	88	77.990	Mus_spretus
ENSORLG00015015699	smfn	66	80.097	ENSMPUG00000003947	REXO2	87	80.097	Mustela_putorius_furo
ENSORLG00015015699	smfn	66	79.612	ENSMLUG00000009030	REXO2	87	79.612	Myotis_lucifugus
ENSORLG00015015699	smfn	65	80.693	ENSNGAG00000008819	Rexo2	99	80.693	Nannospalax_galili
ENSORLG00015015699	smfn	59	84.530	ENSNBRG00000006529	smfn	95	84.530	Neolamprologus_brichardi
ENSORLG00015015699	smfn	66	79.612	ENSNLEG00000029745	REXO2	87	79.612	Nomascus_leucogenys
ENSORLG00015015699	smfn	70	75.814	ENSMEUG00000011558	REXO2	99	75.814	Notamacropus_eugenii
ENSORLG00015015699	smfn	66	56.311	ENSOPRG00000011076	REXO2	87	56.311	Ochotona_princeps
ENSORLG00015015699	smfn	60	82.703	ENSODEG00000009750	-	98	82.703	Octodon_degus
ENSORLG00015015699	smfn	59	64.641	ENSODEG00000016046	-	91	64.641	Octodon_degus
ENSORLG00015015699	smfn	65	83.000	ENSONIG00000001954	smfn	86	83.000	Oreochromis_niloticus
ENSORLG00015015699	smfn	65	79.208	ENSOANG00000001754	REXO2	87	78.155	Ornithorhynchus_anatinus
ENSORLG00015015699	smfn	66	80.583	ENSOCUG00000004274	REXO2	82	80.583	Oryctolagus_cuniculus
ENSORLG00015015699	smfn	100	97.735	ENSORLG00000005119	smfn	100	97.735	Oryzias_latipes
ENSORLG00015015699	smfn	100	98.706	ENSORLG00020010121	smfn	100	98.706	Oryzias_latipes_hni
ENSORLG00015015699	smfn	89	86.182	ENSOMEG00000016878	REXO2	100	86.182	Oryzias_melastigma
ENSORLG00015015699	smfn	66	80.583	ENSOGAG00000016860	REXO2	87	80.583	Otolemur_garnettii
ENSORLG00015015699	smfn	63	82.143	ENSOARG00000001040	REXO2	98	78.846	Ovis_aries
ENSORLG00015015699	smfn	66	79.612	ENSPPAG00000039849	REXO2	87	79.612	Pan_paniscus
ENSORLG00015015699	smfn	66	80.097	ENSPPRG00000007255	REXO2	87	80.097	Panthera_pardus
ENSORLG00015015699	smfn	60	82.162	ENSPTIG00000015578	REXO2	98	82.162	Panthera_tigris_altaica
ENSORLG00015015699	smfn	66	79.612	ENSPTRG00000004306	REXO2	87	79.612	Pan_troglodytes
ENSORLG00015015699	smfn	66	79.612	ENSPANG00000010675	REXO2	87	79.612	Papio_anubis
ENSORLG00015015699	smfn	87	67.384	ENSPKIG00000000911	smfn	77	87.838	Paramormyrops_kingsleyae
ENSORLG00015015699	smfn	63	80.102	ENSPSIG00000005151	REXO2	77	75.943	Pelodiscus_sinensis
ENSORLG00015015699	smfn	60	83.243	ENSPMGG00000007442	smfn	98	83.243	Periophthalmus_magnuspinnatus
ENSORLG00015015699	smfn	77	58.996	ENSPEMG00000001421	Rexo2	97	59.072	Peromyscus_maniculatus_bairdii
ENSORLG00015015699	smfn	66	80.000	ENSPCIG00000011227	REXO2	55	80.000	Phascolarctos_cinereus
ENSORLG00015015699	smfn	85	68.266	ENSPFOG00000017861	smfn	99	82.587	Poecilia_formosa
ENSORLG00015015699	smfn	73	66.239	ENSPLAG00000007327	REXO2	90	66.239	Poecilia_latipinna
ENSORLG00015015699	smfn	85	68.266	ENSPMEG00000017343	smfn	96	68.266	Poecilia_mexicana
ENSORLG00015015699	smfn	85	66.790	ENSPREG00000016438	smfn	96	66.790	Poecilia_reticulata
ENSORLG00015015699	smfn	66	79.612	ENSPPYG00000003895	REXO2	87	79.612	Pongo_abelii
ENSORLG00015015699	smfn	63	81.633	ENSPCAG00000005237	REXO2	87	79.710	Procavia_capensis
ENSORLG00015015699	smfn	54	82.635	ENSPCOG00000027639	REXO2	86	82.635	Propithecus_coquereli
ENSORLG00015015699	smfn	66	68.269	ENSPVAG00000005295	REXO2	87	68.269	Pteropus_vampyrus
ENSORLG00015015699	smfn	65	81.500	ENSPNYG00000018401	smfn	76	81.500	Pundamilia_nyererei
ENSORLG00015015699	smfn	63	85.567	ENSPNAG00000005290	smfn	73	84.848	Pygocentrus_nattereri
ENSORLG00015015699	smfn	67	78.469	ENSRNOG00000018939	Rexo2	88	78.469	Rattus_norvegicus
ENSORLG00015015699	smfn	66	79.612	ENSRBIG00000037809	REXO2	87	79.612	Rhinopithecus_bieti
ENSORLG00015015699	smfn	66	79.612	ENSRROG00000038928	REXO2	87	79.612	Rhinopithecus_roxellana
ENSORLG00015015699	smfn	60	40.415	YLR059C	REX2	74	40.796	Saccharomyces_cerevisiae
ENSORLG00015015699	smfn	66	80.583	ENSSBOG00000028651	REXO2	87	80.583	Saimiri_boliviensis_boliviensis
ENSORLG00015015699	smfn	66	80.000	ENSSHAG00000008008	REXO2	88	80.000	Sarcophilus_harrisii
ENSORLG00015015699	smfn	60	83.243	ENSSFOG00015022414	smfn	98	83.243	Scleropages_formosus
ENSORLG00015015699	smfn	70	76.087	ENSSMAG00000003168	smfn	84	76.087	Scophthalmus_maximus
ENSORLG00015015699	smfn	81	72.656	ENSSDUG00000015624	smfn	90	72.656	Seriola_dumerili
ENSORLG00015015699	smfn	81	73.333	ENSSLDG00000014005	smfn	90	73.333	Seriola_lalandi_dorsalis
ENSORLG00015015699	smfn	51	75.159	ENSSPUG00000006005	REXO2	84	75.159	Sphenodon_punctatus
ENSORLG00015015699	smfn	60	88.649	ENSSPAG00000001530	smfn	99	88.649	Stegastes_partitus
ENSORLG00015015699	smfn	66	80.097	ENSSSCG00000015056	REXO2	87	80.097	Sus_scrofa
ENSORLG00015015699	smfn	64	77.665	ENSTGUG00000000121	REXO2	86	76.617	Taeniopygia_guttata
ENSORLG00015015699	smfn	63	80.412	ENSTRUG00000021529	smfn	73	80.402	Takifugu_rubripes
ENSORLG00015015699	smfn	61	83.158	ENSTNIG00000008588	smfn	94	76.577	Tetraodon_nigroviridis
ENSORLG00015015699	smfn	66	80.583	ENSTBEG00000017040	REXO2	87	80.583	Tupaia_belangeri
ENSORLG00015015699	smfn	67	78.641	ENSTTRG00000014928	REXO2	87	78.641	Tursiops_truncatus
ENSORLG00015015699	smfn	66	73.558	ENSUAMG00000019096	REXO2	86	82.036	Ursus_americanus
ENSORLG00015015699	smfn	66	80.097	ENSUMAG00000003770	REXO2	87	80.097	Ursus_maritimus
ENSORLG00015015699	smfn	60	64.324	ENSVPAG00000006301	REXO2	98	64.324	Vicugna_pacos
ENSORLG00015015699	smfn	66	80.097	ENSVVUG00000025223	REXO2	87	80.097	Vulpes_vulpes
ENSORLG00015015699	smfn	65	81.500	ENSXETG00000012648	rexo2	94	73.913	Xenopus_tropicalis
ENSORLG00015015699	smfn	60	80.000	ENSXCOG00000018838	smfn	94	80.000	Xiphophorus_couchianus
ENSORLG00015015699	smfn	85	67.037	ENSXMAG00000021125	smfn	85	67.037	Xiphophorus_maculatus