EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015015719 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 248168 bases
Position: chr11:4924925-5173092
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015014791	RRM_1	PF00076.22	2.8e-31	1	2
ENSORLP00015014791	RRM_1	PF00076.22	2.8e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015022513	-	1859	-	ENSORLP00015014791	416 (aa)	-	-

Gene Model

Click here to download ENSORLG00015015719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015015719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015015719	-	99	81.948	ENSORLG00015005509	rbms3	99	81.948
ENSORLG00015015719	-	84	69.688	ENSORLG00015018208	RBMS1	90	65.608
ENSORLG00015015719	-	80	72.836	ENSORLG00015022556	rbms2b	85	72.836
ENSORLG00015015719	-	76	62.187	ENSORLG00015016556	rbms1a	86	62.623
ENSORLG00015015719	-	95	69.270	ENSORLG00015012519	rbms2a	92	70.745

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015015719	-	99	87.857	ENSG00000144642	RBMS3	100	90.152	Homo_sapiens
ENSORLG00015015719	-	100	98.558	ENSAPOG00000003432	-	100	98.558	Acanthochromis_polyacanthus
ENSORLG00015015719	-	99	74.398	ENSAPOG00000007266	rbms3	93	82.597	Acanthochromis_polyacanthus
ENSORLG00015015719	-	69	83.498	ENSAMEG00000005947	RBMS3	99	83.498	Ailuropoda_melanoleuca
ENSORLG00015015719	-	88	74.863	ENSACIG00000021113	RBMS3	95	75.137	Amphilophus_citrinellus
ENSORLG00015015719	-	78	96.319	ENSACIG00000006987	-	89	96.319	Amphilophus_citrinellus
ENSORLG00015015719	-	99	82.629	ENSAOCG00000021274	rbms3	99	82.629	Amphiprion_ocellaris
ENSORLG00015015719	-	100	91.034	ENSAOCG00000024104	-	100	91.034	Amphiprion_ocellaris
ENSORLG00015015719	-	82	84.091	ENSAPEG00000016299	rbms3	87	87.349	Amphiprion_percula
ENSORLG00015015719	-	100	90.144	ENSAPEG00000009481	-	100	90.144	Amphiprion_percula
ENSORLG00015015719	-	100	98.317	ENSATEG00000008433	-	100	98.317	Anabas_testudineus
ENSORLG00015015719	-	99	83.255	ENSATEG00000024295	rbms3	99	83.491	Anabas_testudineus
ENSORLG00015015719	-	99	85.417	ENSAPLG00000012270	RBMS3	99	84.722	Anas_platyrhynchos
ENSORLG00015015719	-	99	87.828	ENSACAG00000028664	RBMS3	99	87.828	Anolis_carolinensis
ENSORLG00015015719	-	99	85.219	ENSANAG00000021899	RBMS3	99	85.219	Aotus_nancymaae
ENSORLG00015015719	-	100	89.066	ENSACLG00000008976	-	94	89.066	Astatotilapia_calliptera
ENSORLG00015015719	-	99	82.506	ENSACLG00000018506	rbms3	99	82.742	Astatotilapia_calliptera
ENSORLG00015015719	-	62	87.597	ENSAMXG00000043770	-	100	87.597	Astyanax_mexicanus
ENSORLG00015015719	-	99	89.855	ENSAMXG00000020388	rbms3	99	89.855	Astyanax_mexicanus
ENSORLG00015015719	-	99	88.333	ENSBTAG00000044062	RBMS3	99	88.333	Bos_taurus
ENSORLG00015015719	-	99	85.219	ENSCJAG00000004312	RBMS3	99	85.219	Callithrix_jacchus
ENSORLG00015015719	-	99	84.633	ENSCAFG00000005464	RBMS3	99	84.633	Canis_familiaris
ENSORLG00015015719	-	99	84.633	ENSCAFG00020024980	RBMS3	99	84.633	Canis_lupus_dingo
ENSORLG00015015719	-	99	87.857	ENSCHIG00000009144	RBMS3	99	87.857	Capra_hircus
ENSORLG00015015719	-	76	85.152	ENSTSYG00000002615	RBMS3	99	85.152	Carlito_syrichta
ENSORLG00015015719	-	88	83.288	ENSCAPG00000017783	RBMS3	95	82.574	Cavia_aperea
ENSORLG00015015719	-	99	88.193	ENSCPOG00000006457	RBMS3	99	88.193	Cavia_porcellus
ENSORLG00015015719	-	99	85.219	ENSCCAG00000008671	RBMS3	99	85.219	Cebus_capucinus
ENSORLG00015015719	-	100	84.862	ENSCATG00000013222	RBMS3	100	84.862	Cercocebus_atys
ENSORLG00015015719	-	99	87.381	ENSCLAG00000005866	RBMS3	99	87.381	Chinchilla_lanigera
ENSORLG00015015719	-	65	87.037	ENSCSAG00000009655	RBMS3	99	87.037	Chlorocebus_sabaeus
ENSORLG00015015719	-	87	88.000	ENSCHOG00000000758	RBMS3	86	88.000	Choloepus_hoffmanni
ENSORLG00015015719	-	99	88.067	ENSCPBG00000022678	RBMS3	99	88.067	Chrysemys_picta_bellii
ENSORLG00015015719	-	99	84.988	ENSCANG00000032137	RBMS3	99	84.988	Colobus_angolensis_palliatus
ENSORLG00015015719	-	99	86.506	ENSCGRG00001007243	Rbms3	99	86.506	Cricetulus_griseus_chok1gshd
ENSORLG00015015719	-	99	86.506	ENSCGRG00000004599	Rbms3	99	86.506	Cricetulus_griseus_crigri
ENSORLG00015015719	-	100	96.875	ENSCSEG00000014677	-	94	100.000	Cynoglossus_semilaevis
ENSORLG00015015719	-	99	82.824	ENSCSEG00000010011	RBMS3	99	83.059	Cynoglossus_semilaevis
ENSORLG00015015719	-	99	83.810	ENSCVAG00000022354	rbms3	99	83.810	Cyprinodon_variegatus
ENSORLG00015015719	-	100	97.602	ENSCVAG00000022814	-	100	97.650	Cyprinodon_variegatus
ENSORLG00015015719	-	99	89.130	ENSDARG00000044574	rbms3	95	94.891	Danio_rerio
ENSORLG00015015719	-	99	87.381	ENSDNOG00000016645	RBMS3	96	87.381	Dasypus_novemcinctus
ENSORLG00015015719	-	99	87.143	ENSDORG00000007220	Rbms3	99	87.143	Dipodomys_ordii
ENSORLG00015015719	-	87	83.333	ENSETEG00000009485	-	80	70.000	Echinops_telfairi
ENSORLG00015015719	-	67	53.763	ENSEBUG00000005830	rbms3	86	54.887	Eptatretus_burgeri
ENSORLG00015015719	-	99	87.619	ENSEASG00005006152	RBMS3	99	87.619	Equus_asinus_asinus
ENSORLG00015015719	-	99	87.619	ENSECAG00000017871	RBMS3	99	87.619	Equus_caballus
ENSORLG00015015719	-	90	79.040	ENSEEUG00000014337	RBMS3	100	79.040	Erinaceus_europaeus
ENSORLG00015015719	-	99	80.142	ENSELUG00000002862	rbms3	99	80.142	Esox_lucius
ENSORLG00015015719	-	92	95.550	ENSELUG00000006905	-	98	97.942	Esox_lucius
ENSORLG00015015719	-	99	87.381	ENSFCAG00000002130	RBMS3	99	87.381	Felis_catus
ENSORLG00015015719	-	99	88.305	ENSFALG00000009165	RBMS3	99	88.305	Ficedula_albicollis
ENSORLG00015015719	-	99	86.905	ENSFDAG00000008278	RBMS3	99	86.905	Fukomys_damarensis
ENSORLG00015015719	-	95	69.877	ENSFHEG00000004787	RBMS3	94	76.294	Fundulus_heteroclitus
ENSORLG00015015719	-	90	88.413	ENSGMOG00000002600	-	96	88.413	Gadus_morhua
ENSORLG00015015719	-	99	88.305	ENSGALG00000011439	RBMS3	99	88.305	Gallus_gallus
ENSORLG00015015719	-	100	97.842	ENSGAFG00000003329	-	100	97.842	Gambusia_affinis
ENSORLG00015015719	-	99	84.086	ENSGAFG00000000168	rbms3	99	84.086	Gambusia_affinis
ENSORLG00015015719	-	65	87.085	ENSGAGG00000004039	RBMS3	99	87.085	Gopherus_agassizii
ENSORLG00015015719	-	99	85.219	ENSGGOG00000007228	RBMS3	99	85.219	Gorilla_gorilla
ENSORLG00015015719	-	100	93.303	ENSHBUG00000019785	-	96	93.303	Haplochromis_burtoni
ENSORLG00015015719	-	63	85.874	ENSHBUG00000021196	rbms3	94	85.874	Haplochromis_burtoni
ENSORLG00015015719	-	99	87.381	ENSHGLG00000002170	RBMS3	99	87.381	Heterocephalus_glaber_female
ENSORLG00015015719	-	99	87.381	ENSHGLG00100014278	RBMS3	99	87.381	Heterocephalus_glaber_male
ENSORLG00015015719	-	100	96.643	ENSHCOG00000007894	-	100	96.643	Hippocampus_comes
ENSORLG00015015719	-	99	90.097	ENSIPUG00000017680	rbms3	99	90.097	Ictalurus_punctatus
ENSORLG00015015719	-	99	87.857	ENSSTOG00000006324	RBMS3	99	87.857	Ictidomys_tridecemlineatus
ENSORLG00015015719	-	99	84.286	ENSJJAG00000014708	Rbms3	99	84.524	Jaculus_jaculus
ENSORLG00015015719	-	99	81.499	ENSKMAG00000020500	rbms3	99	81.499	Kryptolebias_marmoratus
ENSORLG00015015719	-	100	97.837	ENSKMAG00000012586	-	100	97.837	Kryptolebias_marmoratus
ENSORLG00015015719	-	60	75.758	ENSLBEG00000006677	rbms3	97	75.758	Labrus_bergylta
ENSORLG00015015719	-	100	97.356	ENSLBEG00000027388	-	100	97.356	Labrus_bergylta
ENSORLG00015015719	-	99	90.191	ENSLACG00000010581	RBMS3	99	90.191	Latimeria_chalumnae
ENSORLG00015015719	-	69	91.696	ENSLOCG00000002328	rbms3	99	91.696	Lepisosteus_oculatus
ENSORLG00015015719	-	99	84.404	ENSLAFG00000000354	RBMS3	99	84.404	Loxodonta_africana
ENSORLG00015015719	-	99	87.619	ENSMFAG00000033300	RBMS3	99	87.619	Macaca_fascicularis
ENSORLG00015015719	-	99	87.619	ENSMMUG00000004404	RBMS3	99	87.619	Macaca_mulatta
ENSORLG00015015719	-	99	84.988	ENSMNEG00000035839	RBMS3	99	84.988	Macaca_nemestrina
ENSORLG00015015719	-	100	84.862	ENSMLEG00000029464	RBMS3	100	84.862	Mandrillus_leucophaeus
ENSORLG00015015719	-	94	98.214	ENSMAMG00000002176	-	88	98.214	Mastacembelus_armatus
ENSORLG00015015719	-	99	83.529	ENSMAMG00000024043	rbms3	99	84.471	Mastacembelus_armatus
ENSORLG00015015719	-	100	94.848	ENSMZEG00005026469	-	96	94.848	Maylandia_zebra
ENSORLG00015015719	-	99	82.506	ENSMZEG00005006308	rbms3	99	82.742	Maylandia_zebra
ENSORLG00015015719	-	99	86.506	ENSMAUG00000016436	Rbms3	99	86.506	Mesocricetus_auratus
ENSORLG00015015719	-	99	85.219	ENSMICG00000049249	RBMS3	99	85.219	Microcebus_murinus
ENSORLG00015015719	-	99	86.265	ENSMOCG00000006997	Rbms3	99	86.265	Microtus_ochrogaster
ENSORLG00015015719	-	100	96.635	ENSMMOG00000015071	-	100	96.635	Mola_mola
ENSORLG00015015719	-	82	84.857	ENSMMOG00000008471	RBMS3	89	88.146	Mola_mola
ENSORLG00015015719	-	99	80.134	ENSMODG00000015125	RBMS3	99	79.464	Monodelphis_domestica
ENSORLG00015015719	-	99	83.059	ENSMALG00000019536	RBMS3	99	81.132	Monopterus_albus
ENSORLG00015015719	-	100	97.596	ENSMALG00000009155	-	100	97.596	Monopterus_albus
ENSORLG00015015719	-	99	85.542	MGP_CAROLIEiJ_G0032783	Rbms3	100	90.338	Mus_caroli
ENSORLG00015015719	-	99	86.265	ENSMUSG00000039607	Rbms3	100	91.787	Mus_musculus
ENSORLG00015015719	-	99	86.058	MGP_PahariEiJ_G0015650	Rbms3	100	91.787	Mus_pahari
ENSORLG00015015719	-	99	86.265	MGP_SPRETEiJ_G0033930	Rbms3	100	91.787	Mus_spretus
ENSORLG00015015719	-	99	84.633	ENSMPUG00000011956	RBMS3	99	84.633	Mustela_putorius_furo
ENSORLG00015015719	-	99	87.619	ENSMLUG00000000659	RBMS3	99	87.619	Myotis_lucifugus
ENSORLG00015015719	-	99	88.193	ENSNGAG00000014039	Rbms3	99	88.193	Nannospalax_galili
ENSORLG00015015719	-	100	97.356	ENSNBRG00000018065	-	100	97.356	Neolamprologus_brichardi
ENSORLG00015015719	-	99	85.219	ENSNLEG00000004129	RBMS3	99	85.219	Nomascus_leucogenys
ENSORLG00015015719	-	99	78.032	ENSMEUG00000004772	RBMS3	99	78.032	Notamacropus_eugenii
ENSORLG00015015719	-	99	84.527	ENSOPRG00000006808	RBMS3	85	84.527	Ochotona_princeps
ENSORLG00015015719	-	99	87.857	ENSODEG00000003651	RBMS3	99	87.857	Octodon_degus
ENSORLG00015015719	-	99	77.197	ENSONIG00000007172	rbms3	99	77.435	Oreochromis_niloticus
ENSORLG00015015719	-	99	85.321	ENSOANG00000010529	RBMS3	99	85.321	Ornithorhynchus_anatinus
ENSORLG00015015719	-	99	83.945	ENSOCUG00000004840	RBMS3	99	83.945	Oryctolagus_cuniculus
ENSORLG00015015719	-	100	99.760	ENSORLG00000002306	-	100	99.760	Oryzias_latipes
ENSORLG00015015719	-	99	81.710	ENSORLG00000005370	RBMS3	99	81.710	Oryzias_latipes
ENSORLG00015015719	-	100	100.000	ENSORLG00020008496	-	100	100.000	Oryzias_latipes_hni
ENSORLG00015015719	-	99	81.473	ENSORLG00020022674	RBMS3	99	81.473	Oryzias_latipes_hni
ENSORLG00015015719	-	92	99.738	ENSOMEG00000007677	-	100	99.738	Oryzias_melastigma
ENSORLG00015015719	-	99	82.423	ENSOMEG00000014805	RBMS3	99	82.423	Oryzias_melastigma
ENSORLG00015015719	-	99	84.174	ENSOARG00000014684	RBMS3	99	84.174	Ovis_aries
ENSORLG00015015719	-	99	85.219	ENSPPAG00000036519	RBMS3	99	85.219	Pan_paniscus
ENSORLG00015015719	-	99	84.527	ENSPPRG00000002761	RBMS3	99	84.527	Panthera_pardus
ENSORLG00015015719	-	99	87.143	ENSPTIG00000011568	RBMS3	99	87.143	Panthera_tigris_altaica
ENSORLG00015015719	-	99	87.857	ENSPTRG00000014709	RBMS3	99	87.857	Pan_troglodytes
ENSORLG00015015719	-	100	84.862	ENSPANG00000010234	RBMS3	100	84.862	Papio_anubis
ENSORLG00015015719	-	50	93.269	ENSPKIG00000016025	-	86	80.632	Paramormyrops_kingsleyae
ENSORLG00015015719	-	62	92.636	ENSPKIG00000007989	-	100	92.636	Paramormyrops_kingsleyae
ENSORLG00015015719	-	99	87.589	ENSPSIG00000005269	RBMS3	99	87.589	Pelodiscus_sinensis
ENSORLG00015015719	-	92	97.382	ENSPMGG00000021683	-	100	97.382	Periophthalmus_magnuspinnatus
ENSORLG00015015719	-	82	84.195	ENSPMGG00000021544	rbms3	86	86.446	Periophthalmus_magnuspinnatus
ENSORLG00015015719	-	99	83.575	ENSPEMG00000001117	Rbms3	99	83.575	Peromyscus_maniculatus_bairdii
ENSORLG00015015719	-	83	89.174	ENSPCIG00000006106	RBMS3	89	89.720	Phascolarctos_cinereus
ENSORLG00015015719	-	99	83.848	ENSPFOG00000017887	rbms3	99	83.848	Poecilia_formosa
ENSORLG00015015719	-	77	81.931	ENSPLAG00000016866	-	82	81.931	Poecilia_latipinna
ENSORLG00015015719	-	100	97.842	ENSPMEG00000002993	-	100	97.842	Poecilia_mexicana
ENSORLG00015015719	-	97	95.792	ENSPREG00000018221	-	97	97.222	Poecilia_reticulata
ENSORLG00015015719	-	100	81.991	ENSPREG00000011880	rbms3	100	81.991	Poecilia_reticulata
ENSORLG00015015719	-	99	71.560	ENSPPYG00000014050	RBMS3	82	71.560	Pongo_abelii
ENSORLG00015015719	-	99	65.367	ENSPCAG00000006307	RBMS3	99	65.367	Procavia_capensis
ENSORLG00015015719	-	99	85.450	ENSPCOG00000017136	RBMS3	99	85.450	Propithecus_coquereli
ENSORLG00015015719	-	89	88.000	ENSPVAG00000014037	RBMS3	99	75.459	Pteropus_vampyrus
ENSORLG00015015719	-	100	97.596	ENSPNYG00000012624	-	100	97.596	Pundamilia_nyererei
ENSORLG00015015719	-	99	82.270	ENSPNYG00000010546	rbms3	99	82.506	Pundamilia_nyererei
ENSORLG00015015719	-	99	89.855	ENSPNAG00000001800	rbms3	99	89.855	Pygocentrus_nattereri
ENSORLG00015015719	-	99	86.506	ENSRNOG00000025881	Rbms3	99	86.506	Rattus_norvegicus
ENSORLG00015015719	-	99	84.758	ENSRBIG00000035863	RBMS3	99	84.758	Rhinopithecus_bieti
ENSORLG00015015719	-	88	86.280	ENSRROG00000027512	RBMS3	94	85.233	Rhinopithecus_roxellana
ENSORLG00015015719	-	99	85.219	ENSSBOG00000020232	RBMS3	99	85.219	Saimiri_boliviensis_boliviensis
ENSORLG00015015719	-	88	82.787	ENSSHAG00000002411	RBMS3	95	81.501	Sarcophilus_harrisii
ENSORLG00015015719	-	100	94.471	ENSSFOG00015008578	rbms3	100	94.471	Scleropages_formosus
ENSORLG00015015719	-	97	93.035	ENSSMAG00000020065	-	92	98.529	Scophthalmus_maximus
ENSORLG00015015719	-	99	79.577	ENSSMAG00000004997	rbms3	99	83.607	Scophthalmus_maximus
ENSORLG00015015719	-	100	98.558	ENSSDUG00000019287	-	100	98.558	Seriola_dumerili
ENSORLG00015015719	-	99	83.059	ENSSDUG00000013656	RBMS3	99	83.294	Seriola_dumerili
ENSORLG00015015719	-	100	98.558	ENSSLDG00000013224	-	100	98.558	Seriola_lalandi_dorsalis
ENSORLG00015015719	-	99	82.710	ENSSLDG00000020276	RBMS3	99	82.944	Seriola_lalandi_dorsalis
ENSORLG00015015719	-	78	74.561	ENSSARG00000000695	RBMS3	94	73.429	Sorex_araneus
ENSORLG00015015719	-	69	86.301	ENSSPUG00000017197	RBMS3	97	85.185	Sphenodon_punctatus
ENSORLG00015015719	-	99	82.629	ENSSPAG00000020693	rbms3	99	82.864	Stegastes_partitus
ENSORLG00015015719	-	100	90.115	ENSSPAG00000003983	-	100	90.115	Stegastes_partitus
ENSORLG00015015719	-	99	87.381	ENSSSCG00000036381	RBMS3	99	87.381	Sus_scrofa
ENSORLG00015015719	-	76	84.685	ENSTGUG00000003572	RBMS3	99	84.685	Taeniopygia_guttata
ENSORLG00015015719	-	100	85.986	ENSTRUG00000007482	-	100	86.158	Takifugu_rubripes
ENSORLG00015015719	-	99	80.941	ENSTRUG00000021719	RBMS3	99	80.941	Takifugu_rubripes
ENSORLG00015015719	-	78	87.719	ENSTBEG00000005362	RBMS3	94	86.533	Tupaia_belangeri
ENSORLG00015015719	-	99	83.945	ENSTTRG00000006202	RBMS3	99	83.945	Tursiops_truncatus
ENSORLG00015015719	-	99	84.633	ENSUMAG00000000263	RBMS3	99	84.633	Ursus_maritimus
ENSORLG00015015719	-	88	75.853	ENSVPAG00000003842	RBMS3	94	74.807	Vicugna_pacos
ENSORLG00015015719	-	88	86.126	ENSVVUG00000004660	RBMS3	94	92.202	Vulpes_vulpes
ENSORLG00015015719	-	70	81.107	ENSXETG00000032055	RBMS3	98	81.107	Xenopus_tropicalis
ENSORLG00015015719	-	92	82.005	ENSXCOG00000019600	-	98	81.675	Xiphophorus_couchianus
ENSORLG00015015719	-	100	98.082	ENSXMAG00000014382	-	100	98.082	Xiphophorus_maculatus
ENSORLG00015015719	-	99	82.227	ENSXMAG00000021783	rbms3	99	82.227	Xiphophorus_maculatus