EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015015779 (Gene tree)
Gene ID: -
Gene Symbol: SCAF8
Alias: -
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 76534 bases
Position: chr22:16259467-16336000
Accession: 20959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015014864	RRM_1	PF00076.22	4.1e-08	1	1
ENSORLP00015031489	RRM_1	PF00076.22	4.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015022627	SCAF8-202	4660	-	ENSORLP00015014864	1384 (aa)	-	-
ENSORLT00015022598	SCAF8-201	7918	-	ENSORLP00015031489	1384 (aa)	-	-

Gene Model

Click here to download ENSORLG00015015779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015015779's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015015779	SCAF8	78	69.174	ENSG00000213079	SCAF8	86	69.174	Homo_sapiens
ENSORLG00015015779	SCAF8	50	52.768	ENSAPOG00000019615	scaf4b	58	60.309	Acanthochromis_polyacanthus
ENSORLG00015015779	SCAF8	100	81.722	ENSAPOG00000015527	SCAF8	100	81.510	Acanthochromis_polyacanthus
ENSORLG00015015779	SCAF8	78	67.548	ENSAMEG00000007583	SCAF8	83	67.668	Ailuropoda_melanoleuca
ENSORLG00015015779	SCAF8	100	81.013	ENSAOCG00000002421	SCAF8	100	81.127	Amphiprion_ocellaris
ENSORLG00015015779	SCAF8	98	71.782	ENSAPEG00000020115	SCAF8	68	67.591	Amphiprion_percula
ENSORLG00015015779	SCAF8	78	82.380	ENSATEG00000006959	SCAF8	95	82.348	Anabas_testudineus
ENSORLG00015015779	SCAF8	78	71.279	ENSAPLG00000005765	SCAF8	85	68.020	Anas_platyrhynchos
ENSORLG00015015779	SCAF8	75	72.230	ENSACAG00000005282	SCAF8	81	71.696	Anolis_carolinensis
ENSORLG00015015779	SCAF8	78	69.174	ENSANAG00000036184	SCAF8	86	69.174	Aotus_nancymaae
ENSORLG00015015779	SCAF8	100	79.239	ENSACLG00000018828	SCAF8	100	78.879	Astatotilapia_calliptera
ENSORLG00015015779	SCAF8	78	69.042	ENSBTAG00000031917	SCAF8	86	69.165	Bos_taurus
ENSORLG00015015779	SCAF8	78	69.420	ENSCJAG00000012631	SCAF8	83	67.668	Callithrix_jacchus
ENSORLG00015015779	SCAF8	77	69.288	ENSCAFG00000000570	SCAF8	85	69.413	Canis_familiaris
ENSORLG00015015779	SCAF8	77	69.288	ENSCAFG00020015048	SCAF8	84	69.413	Canis_lupus_dingo
ENSORLG00015015779	SCAF8	78	69.042	ENSCHIG00000025041	SCAF8	86	69.165	Capra_hircus
ENSORLG00015015779	SCAF8	78	67.067	ENSTSYG00000010991	SCAF8	85	67.067	Carlito_syrichta
ENSORLG00015015779	SCAF8	57	58.685	ENSCPOG00000022216	-	62	57.940	Cavia_porcellus
ENSORLG00015015779	SCAF8	78	59.483	ENSCPOG00000030311	-	56	65.909	Cavia_porcellus
ENSORLG00015015779	SCAF8	78	69.174	ENSCCAG00000024952	SCAF8	86	69.297	Cebus_capucinus
ENSORLG00015015779	SCAF8	78	69.174	ENSCATG00000035361	SCAF8	86	69.174	Cercocebus_atys
ENSORLG00015015779	SCAF8	78	67.975	ENSCLAG00000004910	SCAF8	86	68.447	Chinchilla_lanigera
ENSORLG00015015779	SCAF8	78	66.237	ENSCSAG00000013430	SCAF8	86	67.428	Chlorocebus_sabaeus
ENSORLG00015015779	SCAF8	78	70.210	ENSCPBG00000016330	SCAF8	81	69.400	Chrysemys_picta_bellii
ENSORLG00015015779	SCAF8	78	69.051	ENSCANG00000039499	SCAF8	85	68.914	Colobus_angolensis_palliatus
ENSORLG00015015779	SCAF8	54	72.513	ENSCGRG00001020167	Scaf8	93	56.919	Cricetulus_griseus_chok1gshd
ENSORLG00015015779	SCAF8	54	72.069	ENSCGRG00000004120	Scaf8	92	56.763	Cricetulus_griseus_crigri
ENSORLG00015015779	SCAF8	100	75.497	ENSCSEG00000000043	-	100	75.943	Cynoglossus_semilaevis
ENSORLG00015015779	SCAF8	96	75.111	ENSCVAG00000000925	SCAF8	99	74.294	Cyprinodon_variegatus
ENSORLG00015015779	SCAF8	74	65.897	ENSDNOG00000025271	SCAF8	87	65.385	Dasypus_novemcinctus
ENSORLG00015015779	SCAF8	77	68.781	ENSDORG00000006391	Scaf8	92	55.500	Dipodomys_ordii
ENSORLG00015015779	SCAF8	78	66.863	ENSEASG00005018879	SCAF8	86	69.287	Equus_asinus_asinus
ENSORLG00015015779	SCAF8	78	69.250	ENSECAG00000005540	SCAF8	86	69.373	Equus_caballus
ENSORLG00015015779	SCAF8	76	70.297	ENSELUG00000002779	SCAF8	94	61.711	Esox_lucius
ENSORLG00015015779	SCAF8	78	68.780	ENSFCAG00000023424	SCAF8	87	68.819	Felis_catus
ENSORLG00015015779	SCAF8	75	70.443	ENSFALG00000012433	SCAF8	85	68.395	Ficedula_albicollis
ENSORLG00015015779	SCAF8	78	68.395	ENSFDAG00000010335	SCAF8	85	68.395	Fukomys_damarensis
ENSORLG00015015779	SCAF8	100	76.709	ENSFHEG00000008284	SCAF8	100	76.400	Fundulus_heteroclitus
ENSORLG00015015779	SCAF8	65	77.647	ENSGMOG00000018812	SCAF8	83	77.647	Gadus_morhua
ENSORLG00015015779	SCAF8	77	67.368	ENSGALG00000013635	SCAF8	91	66.901	Gallus_gallus
ENSORLG00015015779	SCAF8	100	75.706	ENSGAFG00000018033	SCAF8	100	75.992	Gambusia_affinis
ENSORLG00015015779	SCAF8	78	78.311	ENSGACG00000006909	SCAF8	99	78.444	Gasterosteus_aculeatus
ENSORLG00015015779	SCAF8	78	69.174	ENSGGOG00000008645	SCAF8	86	69.174	Gorilla_gorilla
ENSORLG00015015779	SCAF8	100	79.095	ENSHBUG00000019537	SCAF8	100	78.736	Haplochromis_burtoni
ENSORLG00015015779	SCAF8	78	68.765	ENSHGLG00000003619	SCAF8	86	68.765	Heterocephalus_glaber_female
ENSORLG00015015779	SCAF8	77	68.625	ENSHGLG00100004708	SCAF8	86	68.625	Heterocephalus_glaber_male
ENSORLG00015015779	SCAF8	77	69.125	ENSSTOG00000026043	SCAF8	92	56.406	Ictidomys_tridecemlineatus
ENSORLG00015015779	SCAF8	77	68.642	ENSJJAG00000020480	Scaf8	92	55.917	Jaculus_jaculus
ENSORLG00015015779	SCAF8	100	80.516	ENSKMAG00000012767	SCAF8	100	80.158	Kryptolebias_marmoratus
ENSORLG00015015779	SCAF8	84	95.522	ENSLBEG00000012484	-	92	92.617	Labrus_bergylta
ENSORLG00015015779	SCAF8	78	64.485	ENSLOCG00000016856	SCAF8	93	64.380	Lepisosteus_oculatus
ENSORLG00015015779	SCAF8	76	71.228	ENSLAFG00000000022	SCAF8	93	56.429	Loxodonta_africana
ENSORLG00015015779	SCAF8	78	69.174	ENSMFAG00000032738	SCAF8	86	69.174	Macaca_fascicularis
ENSORLG00015015779	SCAF8	78	69.174	ENSMMUG00000015163	SCAF8	86	69.174	Macaca_mulatta
ENSORLG00015015779	SCAF8	78	69.174	ENSMNEG00000043466	SCAF8	86	69.174	Macaca_nemestrina
ENSORLG00015015779	SCAF8	77	69.164	ENSMLEG00000034845	SCAF8	85	69.164	Mandrillus_leucophaeus
ENSORLG00015015779	SCAF8	97	76.827	ENSMAMG00000009457	SCAF8	100	76.974	Mastacembelus_armatus
ENSORLG00015015779	SCAF8	100	79.167	ENSMZEG00005005698	SCAF8	100	78.807	Maylandia_zebra
ENSORLG00015015779	SCAF8	77	69.136	ENSMGAG00000012762	SCAF8	90	68.642	Meleagris_gallopavo
ENSORLG00015015779	SCAF8	74	72.546	ENSMAUG00000009513	Scaf8	93	56.977	Mesocricetus_auratus
ENSORLG00015015779	SCAF8	78	66.824	ENSMICG00000028965	SCAF8	93	55.793	Microcebus_murinus
ENSORLG00015015779	SCAF8	75	72.120	ENSMOCG00000014950	Scaf8	82	71.859	Microtus_ochrogaster
ENSORLG00015015779	SCAF8	98	73.517	ENSMMOG00000002216	SCAF8	99	73.923	Mola_mola
ENSORLG00015015779	SCAF8	77	69.875	ENSMODG00000008301	SCAF8	85	70.250	Monodelphis_domestica
ENSORLG00015015779	SCAF8	100	78.375	ENSMALG00000011584	SCAF8	100	78.445	Monopterus_albus
ENSORLG00015015779	SCAF8	75	71.859	MGP_CAROLIEiJ_G0021016	Scaf8	93	56.543	Mus_caroli
ENSORLG00015015779	SCAF8	75	71.728	ENSMUSG00000046201	Scaf8	93	56.379	Mus_musculus
ENSORLG00015015779	SCAF8	75	72.251	MGP_PahariEiJ_G0023334	Scaf8	93	56.568	Mus_pahari
ENSORLG00015015779	SCAF8	75	69.936	ENSMPUG00000001974	SCAF8	83	70.064	Mustela_putorius_furo
ENSORLG00015015779	SCAF8	78	68.719	ENSMLUG00000029190	SCAF8	86	68.842	Myotis_lucifugus
ENSORLG00015015779	SCAF8	57	68.337	ENSNGAG00000012332	Scaf8	93	56.400	Nannospalax_galili
ENSORLG00015015779	SCAF8	80	77.370	ENSNBRG00000009067	SCAF8	93	78.821	Neolamprologus_brichardi
ENSORLG00015015779	SCAF8	78	67.568	ENSNLEG00000015509	SCAF8	85	67.413	Nomascus_leucogenys
ENSORLG00015015779	SCAF8	54	75.258	ENSOPRG00000018413	-	68	75.258	Ochotona_princeps
ENSORLG00015015779	SCAF8	78	69.051	ENSODEG00000007296	SCAF8	86	69.051	Octodon_degus
ENSORLG00015015779	SCAF8	77	83.106	ENSONIG00000008119	SCAF8	93	81.579	Oreochromis_niloticus
ENSORLG00015015779	SCAF8	77	69.202	ENSOCUG00000026063	SCAF8	85	69.125	Oryctolagus_cuniculus
ENSORLG00015015779	SCAF8	100	98.699	ENSORLG00000017358	SCAF8	100	98.699	Oryzias_latipes
ENSORLG00015015779	SCAF8	100	97.977	ENSORLG00020002214	SCAF8	100	97.977	Oryzias_latipes_hni
ENSORLG00015015779	SCAF8	100	93.094	ENSOMEG00000015471	SCAF8	100	93.094	Oryzias_melastigma
ENSORLG00015015779	SCAF8	78	65.023	ENSOGAG00000034223	SCAF8	90	54.487	Otolemur_garnettii
ENSORLG00015015779	SCAF8	77	68.820	ENSOARG00000004159	SCAF8	86	68.944	Ovis_aries
ENSORLG00015015779	SCAF8	78	69.174	ENSPPAG00000039826	SCAF8	86	69.174	Pan_paniscus
ENSORLG00015015779	SCAF8	78	69.496	ENSPPRG00000023175	SCAF8	86	69.619	Panthera_pardus
ENSORLG00015015779	SCAF8	77	69.365	ENSPTIG00000014836	SCAF8	85	69.489	Panthera_tigris_altaica
ENSORLG00015015779	SCAF8	78	69.174	ENSPTRG00000018727	SCAF8	86	69.174	Pan_troglodytes
ENSORLG00015015779	SCAF8	78	69.174	ENSPANG00000017489	SCAF8	85	66.461	Papio_anubis
ENSORLG00015015779	SCAF8	78	70.081	ENSPKIG00000021212	SCAF8	93	71.678	Paramormyrops_kingsleyae
ENSORLG00015015779	SCAF8	67	65.865	ENSPSIG00000008614	SCAF8	70	65.414	Pelodiscus_sinensis
ENSORLG00015015779	SCAF8	74	71.883	ENSPEMG00000010531	Scaf8	93	55.841	Peromyscus_maniculatus_bairdii
ENSORLG00015015779	SCAF8	78	70.247	ENSPCIG00000001141	SCAF8	86	70.494	Phascolarctos_cinereus
ENSORLG00015015779	SCAF8	100	76.258	ENSPFOG00000004176	SCAF8	93	88.402	Poecilia_formosa
ENSORLG00015015779	SCAF8	100	76.471	ENSPLAG00000021432	SCAF8	100	76.754	Poecilia_latipinna
ENSORLG00015015779	SCAF8	100	76.187	ENSPMEG00000007591	SCAF8	100	76.400	Poecilia_mexicana
ENSORLG00015015779	SCAF8	100	76.329	ENSPREG00000000652	SCAF8	100	76.541	Poecilia_reticulata
ENSORLG00015015779	SCAF8	78	67.774	ENSPPYG00000017121	SCAF8	86	67.774	Pongo_abelii
ENSORLG00015015779	SCAF8	64	79.933	ENSPCAG00000013044	SCAF8	74	80.100	Procavia_capensis
ENSORLG00015015779	SCAF8	78	67.059	ENSPCOG00000002067	SCAF8	87	66.905	Propithecus_coquereli
ENSORLG00015015779	SCAF8	78	68.804	ENSPVAG00000005582	SCAF8	87	68.727	Pteropus_vampyrus
ENSORLG00015015779	SCAF8	100	79.239	ENSPNYG00000007277	SCAF8	100	78.879	Pundamilia_nyererei
ENSORLG00015015779	SCAF8	81	70.077	ENSPNAG00000024740	SCAF8	83	70.723	Pygocentrus_nattereri
ENSORLG00015015779	SCAF8	75	71.990	ENSRNOG00000016919	Scaf8	93	56.507	Rattus_norvegicus
ENSORLG00015015779	SCAF8	78	69.051	ENSRBIG00000035769	SCAF8	86	69.051	Rhinopithecus_bieti
ENSORLG00015015779	SCAF8	78	69.051	ENSRROG00000013580	SCAF8	86	69.051	Rhinopithecus_roxellana
ENSORLG00015015779	SCAF8	78	69.174	ENSSBOG00000027023	SCAF8	86	69.174	Saimiri_boliviensis_boliviensis
ENSORLG00015015779	SCAF8	78	69.383	ENSSHAG00000009915	SCAF8	86	70.284	Sarcophilus_harrisii
ENSORLG00015015779	SCAF8	77	63.542	ENSSFOG00015009481	SCAF8	87	78.933	Scleropages_formosus
ENSORLG00015015779	SCAF8	77	83.898	ENSSMAG00000008275	SCAF8	100	76.699	Scophthalmus_maximus
ENSORLG00015015779	SCAF8	75	72.513	ENSSPUG00000015219	SCAF8	79	76.471	Sphenodon_punctatus
ENSORLG00015015779	SCAF8	78	67.095	ENSSSCG00000004070	SCAF8	88	67.409	Sus_scrofa
ENSORLG00015015779	SCAF8	75	71.921	ENSTGUG00000011151	SCAF8	89	66.667	Taeniopygia_guttata
ENSORLG00015015779	SCAF8	100	73.956	ENSTRUG00000009243	SCAF8	100	73.121	Takifugu_rubripes
ENSORLG00015015779	SCAF8	78	78.689	ENSTNIG00000016885	SCAF8	99	78.500	Tetraodon_nigroviridis
ENSORLG00015015779	SCAF8	77	66.383	ENSTTRG00000014538	SCAF8	88	66.990	Tursiops_truncatus
ENSORLG00015015779	SCAF8	78	69.458	ENSUAMG00000024736	SCAF8	85	69.451	Ursus_americanus
ENSORLG00015015779	SCAF8	76	68.996	ENSUMAG00000013404	SCAF8	85	69.123	Ursus_maritimus
ENSORLG00015015779	SCAF8	59	58.922	ENSVPAG00000012465	SCAF8	96	61.131	Vicugna_pacos
ENSORLG00015015779	SCAF8	78	68.889	ENSVVUG00000007532	SCAF8	86	69.084	Vulpes_vulpes
ENSORLG00015015779	SCAF8	71	70.231	ENSXETG00000013132	scaf8	77	70.243	Xenopus_tropicalis
ENSORLG00015015779	SCAF8	100	76.579	ENSXMAG00000019192	SCAF8	100	76.437	Xiphophorus_maculatus