EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015015906 (Gene tree)
Gene ID: -
Gene Symbol: pum3
Alias: -
Full Name: pumilio RNA-binding family member 3
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 14288 bases
Position: chr12:28925415-28939702
Accession: ZDB-GENE-030131-9808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015014986	CPL	PF08144.11	5.1e-47	1	1
ENSORLP00015014962	CPL	PF08144.11	1.5e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015022754	-	1728	-	ENSORLP00015014962	575 (aa)	-	-
ENSORLT00015022770	-	4073	-	ENSORLP00015014986	644 (aa)	-	-

Gene Model

Click here to download ENSORLG00015015906's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015015906's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015015906	pum3	99	52.200	ENSG00000080608	PUM3	99	52.656	Homo_sapiens
ENSORLG00015015906	pum3	100	73.886	ENSAPOG00000020252	pum3	100	74.194	Acanthochromis_polyacanthus
ENSORLG00015015906	pum3	95	53.440	ENSAMEG00000012187	PUM3	99	53.253	Ailuropoda_melanoleuca
ENSORLG00015015906	pum3	91	70.169	ENSACIG00000009786	pum3	97	70.169	Amphilophus_citrinellus
ENSORLG00015015906	pum3	100	74.194	ENSAOCG00000004439	pum3	100	74.501	Amphiprion_ocellaris
ENSORLG00015015906	pum3	100	74.194	ENSAPEG00000020523	pum3	100	74.501	Amphiprion_percula
ENSORLG00015015906	pum3	99	74.576	ENSATEG00000005799	pum3	99	74.884	Anabas_testudineus
ENSORLG00015015906	pum3	90	55.987	ENSAPLG00000002920	PUM3	95	55.987	Anas_platyrhynchos
ENSORLG00015015906	pum3	97	53.913	ENSACAG00000003174	PUM3	97	55.226	Anolis_carolinensis
ENSORLG00015015906	pum3	99	52.432	ENSANAG00000024520	PUM3	99	53.263	Aotus_nancymaae
ENSORLG00015015906	pum3	100	72.171	ENSACLG00000001017	pum3	100	72.171	Astatotilapia_calliptera
ENSORLG00015015906	pum3	97	64.425	ENSAMXG00000020911	pum3	99	61.111	Astyanax_mexicanus
ENSORLG00015015906	pum3	99	52.411	ENSBTAG00000013357	PUM3	99	52.115	Bos_taurus
ENSORLG00015015906	pum3	99	52.280	ENSCJAG00000010917	PUM3	95	54.331	Callithrix_jacchus
ENSORLG00015015906	pum3	96	53.874	ENSCAFG00000002035	PUM3	99	51.520	Canis_familiaris
ENSORLG00015015906	pum3	96	53.874	ENSCAFG00020026867	PUM3	99	51.520	Canis_lupus_dingo
ENSORLG00015015906	pum3	99	53.033	ENSCHIG00000021559	PUM3	99	52.719	Capra_hircus
ENSORLG00015015906	pum3	98	53.175	ENSTSYG00000007481	PUM3	94	53.492	Carlito_syrichta
ENSORLG00015015906	pum3	98	54.930	ENSCAPG00000010592	-	95	51.553	Cavia_aperea
ENSORLG00015015906	pum3	99	53.115	ENSCPOG00000008552	-	95	53.115	Cavia_porcellus
ENSORLG00015015906	pum3	99	51.520	ENSCCAG00000032650	PUM3	99	52.352	Cebus_capucinus
ENSORLG00015015906	pum3	99	52.959	ENSCATG00000024880	PUM3	99	52.959	Cercocebus_atys
ENSORLG00015015906	pum3	99	51.897	ENSCLAG00000011892	PUM3	99	52.200	Chinchilla_lanigera
ENSORLG00015015906	pum3	99	52.656	ENSCSAG00000008691	PUM3	99	52.959	Chlorocebus_sabaeus
ENSORLG00015015906	pum3	65	55.107	ENSCHOG00000002535	PUM3	62	55.107	Choloepus_hoffmanni
ENSORLG00015015906	pum3	97	54.310	ENSCPBG00000025470	PUM3	95	53.918	Chrysemys_picta_bellii
ENSORLG00015015906	pum3	85	38.640	ENSCING00000024199	-	99	38.640	Ciona_intestinalis
ENSORLG00015015906	pum3	90	38.487	ENSCSAVG00000006072	-	99	38.740	Ciona_savignyi
ENSORLG00015015906	pum3	99	52.656	ENSCANG00000006142	PUM3	99	52.959	Colobus_angolensis_palliatus
ENSORLG00015015906	pum3	99	52.888	ENSCGRG00001016402	Pum3	99	53.191	Cricetulus_griseus_chok1gshd
ENSORLG00015015906	pum3	99	52.888	ENSCGRG00000010207	Pum3	99	53.191	Cricetulus_griseus_crigri
ENSORLG00015015906	pum3	96	70.884	ENSCSEG00000001565	pum3	99	71.649	Cynoglossus_semilaevis
ENSORLG00015015906	pum3	70	69.231	ENSCVAG00000006550	pum3	100	69.231	Cyprinodon_variegatus
ENSORLG00015015906	pum3	97	63.186	ENSDARG00000087779	pum3	99	60.462	Danio_rerio
ENSORLG00015015906	pum3	99	43.741	ENSDNOG00000008157	PUM3	70	45.098	Dasypus_novemcinctus
ENSORLG00015015906	pum3	71	30.120	FBgn0015527	peng	57	30.140	Drosophila_melanogaster
ENSORLG00015015906	pum3	81	59.273	ENSETEG00000015331	PUM3	82	59.287	Echinops_telfairi
ENSORLG00015015906	pum3	86	40.514	ENSEBUG00000011586	pum3	89	39.901	Eptatretus_burgeri
ENSORLG00015015906	pum3	96	53.971	ENSEASG00005010350	PUM3	99	52.568	Equus_asinus_asinus
ENSORLG00015015906	pum3	96	53.548	ENSECAG00000017193	PUM3	99	52.568	Equus_caballus
ENSORLG00015015906	pum3	96	46.931	ENSEEUG00000010314	PUM3	100	47.488	Erinaceus_europaeus
ENSORLG00015015906	pum3	97	61.274	ENSELUG00000002215	pum3	99	58.994	Esox_lucius
ENSORLG00015015906	pum3	99	53.763	ENSFALG00000010509	PUM3	99	53.763	Ficedula_albicollis
ENSORLG00015015906	pum3	99	52.888	ENSFDAG00000021027	PUM3	99	52.736	Fukomys_damarensis
ENSORLG00015015906	pum3	100	73.560	ENSFHEG00000015576	pum3	100	73.560	Fundulus_heteroclitus
ENSORLG00015015906	pum3	81	69.313	ENSGMOG00000014217	pum3	99	66.855	Gadus_morhua
ENSORLG00015015906	pum3	90	56.724	ENSGALG00000010178	PUM3	100	53.858	Gallus_gallus
ENSORLG00015015906	pum3	56	72.527	ENSGAFG00000001930	pum3	62	72.527	Gambusia_affinis
ENSORLG00015015906	pum3	83	77.568	ENSGACG00000017878	pum3	99	76.287	Gasterosteus_aculeatus
ENSORLG00015015906	pum3	97	54.213	ENSGAGG00000018983	PUM3	99	54.213	Gopherus_agassizii
ENSORLG00015015906	pum3	99	52.504	ENSGGOG00000006143	PUM3	99	52.807	Gorilla_gorilla
ENSORLG00015015906	pum3	100	61.846	ENSHBUG00000012903	pum3	100	60.565	Haplochromis_burtoni
ENSORLG00015015906	pum3	99	53.040	ENSHGLG00000015868	-	99	53.211	Heterocephalus_glaber_female
ENSORLG00015015906	pum3	99	53.040	ENSHGLG00100018825	PUM3	99	53.211	Heterocephalus_glaber_male
ENSORLG00015015906	pum3	100	69.012	ENSHCOG00000010306	pum3	100	69.851	Hippocampus_comes
ENSORLG00015015906	pum3	96	64.171	ENSIPUG00000024801	pum3	99	62.074	Ictalurus_punctatus
ENSORLG00015015906	pum3	99	52.200	ENSSTOG00000009586	PUM3	99	52.504	Ictidomys_tridecemlineatus
ENSORLG00015015906	pum3	99	52.424	ENSJJAG00000012563	Pum3	99	52.424	Jaculus_jaculus
ENSORLG00015015906	pum3	100	76.235	ENSKMAG00000010277	pum3	100	76.235	Kryptolebias_marmoratus
ENSORLG00015015906	pum3	100	70.382	ENSLBEG00000012213	pum3	100	70.840	Labrus_bergylta
ENSORLG00015015906	pum3	93	55.243	ENSLACG00000008312	PUM3	99	52.489	Latimeria_chalumnae
ENSORLG00015015906	pum3	100	57.781	ENSLOCG00000012529	pum3	100	57.781	Lepisosteus_oculatus
ENSORLG00015015906	pum3	99	52.960	ENSLAFG00000017341	PUM3	99	53.343	Loxodonta_africana
ENSORLG00015015906	pum3	99	52.656	ENSMFAG00000001430	PUM3	99	52.959	Macaca_fascicularis
ENSORLG00015015906	pum3	99	52.656	ENSMMUG00000002362	PUM3	98	52.959	Macaca_mulatta
ENSORLG00015015906	pum3	99	52.656	ENSMNEG00000035288	PUM3	99	52.959	Macaca_nemestrina
ENSORLG00015015906	pum3	99	52.266	ENSMLEG00000034820	PUM3	99	52.568	Mandrillus_leucophaeus
ENSORLG00015015906	pum3	100	72.409	ENSMAMG00000022861	pum3	100	72.866	Mastacembelus_armatus
ENSORLG00015015906	pum3	100	72.018	ENSMZEG00005014205	pum3	97	72.018	Maylandia_zebra
ENSORLG00015015906	pum3	94	50.656	ENSMGAG00000002255	PUM3	94	52.876	Meleagris_gallopavo
ENSORLG00015015906	pum3	99	50.608	ENSMAUG00000009733	Pum3	99	51.442	Mesocricetus_auratus
ENSORLG00015015906	pum3	99	51.593	ENSMICG00000045916	PUM3	87	51.652	Microcebus_murinus
ENSORLG00015015906	pum3	99	51.698	ENSMOCG00000014830	-	99	51.698	Microtus_ochrogaster
ENSORLG00015015906	pum3	99	52.977	ENSMOCG00000019519	-	99	53.282	Microtus_ochrogaster
ENSORLG00015015906	pum3	96	67.145	ENSMMOG00000012184	pum3	100	67.145	Mola_mola
ENSORLG00015015906	pum3	94	55.147	ENSMODG00000015417	PUM3	87	52.607	Monodelphis_domestica
ENSORLG00015015906	pum3	100	74.695	ENSMALG00000022164	pum3	92	75.305	Monopterus_albus
ENSORLG00015015906	pum3	99	52.786	MGP_CAROLIEiJ_G0022845	Pum3	96	53.251	Mus_caroli
ENSORLG00015015906	pum3	99	52.167	ENSMUSG00000041360	Pum3	96	52.941	Mus_musculus
ENSORLG00015015906	pum3	99	52.322	MGP_PahariEiJ_G0014338	Pum3	96	53.251	Mus_pahari
ENSORLG00015015906	pum3	99	52.167	MGP_SPRETEiJ_G0023763	Pum3	96	52.941	Mus_spretus
ENSORLG00015015906	pum3	97	53.451	ENSMPUG00000005125	PUM3	99	51.824	Mustela_putorius_furo
ENSORLG00015015906	pum3	99	51.290	ENSMLUG00000002309	PUM3	99	51.593	Myotis_lucifugus
ENSORLG00015015906	pum3	99	48.636	ENSNGAG00000019468	Pum3	99	49.470	Nannospalax_galili
ENSORLG00015015906	pum3	97	66.403	ENSNBRG00000021370	pum3	95	66.403	Neolamprologus_brichardi
ENSORLG00015015906	pum3	99	52.656	ENSNLEG00000008712	PUM3	99	52.959	Nomascus_leucogenys
ENSORLG00015015906	pum3	78	45.434	ENSMEUG00000013606	-	97	44.106	Notamacropus_eugenii
ENSORLG00015015906	pum3	67	42.163	ENSOPRG00000004225	-	72	42.946	Ochotona_princeps
ENSORLG00015015906	pum3	96	55.135	ENSODEG00000003625	-	99	51.745	Octodon_degus
ENSORLG00015015906	pum3	99	48.036	ENSODEG00000016477	-	99	48.036	Octodon_degus
ENSORLG00015015906	pum3	100	72.936	ENSONIG00000012733	pum3	100	72.936	Oreochromis_niloticus
ENSORLG00015015906	pum3	79	60.307	ENSOANG00000014995	PUM3	98	56.742	Ornithorhynchus_anatinus
ENSORLG00015015906	pum3	94	53.690	ENSOCUG00000026104	-	94	53.473	Oryctolagus_cuniculus
ENSORLG00015015906	pum3	99	50.377	ENSOCUG00000004189	-	99	51.442	Oryctolagus_cuniculus
ENSORLG00015015906	pum3	100	99.068	ENSORLG00000014935	pum3	100	99.068	Oryzias_latipes
ENSORLG00015015906	pum3	100	98.447	ENSORLG00020002841	pum3	100	98.447	Oryzias_latipes_hni
ENSORLG00015015906	pum3	100	91.615	ENSOMEG00000009427	pum3	100	91.615	Oryzias_melastigma
ENSORLG00015015906	pum3	99	51.520	ENSOGAG00000008125	-	99	53.404	Otolemur_garnettii
ENSORLG00015015906	pum3	86	41.577	ENSOGAG00000033481	-	81	43.786	Otolemur_garnettii
ENSORLG00015015906	pum3	99	52.868	ENSOARG00000013337	PUM3	99	52.560	Ovis_aries
ENSORLG00015015906	pum3	99	52.200	ENSPPAG00000041337	PUM3	99	52.504	Pan_paniscus
ENSORLG00015015906	pum3	99	51.368	ENSPPRG00000000809	PUM3	99	51.368	Panthera_pardus
ENSORLG00015015906	pum3	99	51.672	ENSPTIG00000021934	PUM3	99	51.672	Panthera_tigris_altaica
ENSORLG00015015906	pum3	99	52.352	ENSPTRG00000020735	PUM3	99	52.656	Pan_troglodytes
ENSORLG00015015906	pum3	99	52.200	ENSPANG00000025118	PUM3	99	52.504	Papio_anubis
ENSORLG00015015906	pum3	99	58.742	ENSPKIG00000022249	pum3	99	58.132	Paramormyrops_kingsleyae
ENSORLG00015015906	pum3	97	54.834	ENSPSIG00000016272	PUM3	99	54.914	Pelodiscus_sinensis
ENSORLG00015015906	pum3	74	75.887	ENSPMGG00000021261	pum3	99	71.313	Periophthalmus_magnuspinnatus
ENSORLG00015015906	pum3	86	64.286	ENSPEMG00000019340	-	95	42.813	Peromyscus_maniculatus_bairdii
ENSORLG00015015906	pum3	94	54.480	ENSPCIG00000030598	PUM3	80	55.201	Phascolarctos_cinereus
ENSORLG00015015906	pum3	100	65.635	ENSPFOG00000001719	pum3	100	65.635	Poecilia_formosa
ENSORLG00015015906	pum3	100	68.519	ENSPLAG00000020010	pum3	100	68.519	Poecilia_latipinna
ENSORLG00015015906	pum3	100	68.364	ENSPMEG00000017451	pum3	100	68.364	Poecilia_mexicana
ENSORLG00015015906	pum3	70	59.364	ENSPREG00000019478	-	77	54.601	Poecilia_reticulata
ENSORLG00015015906	pum3	99	52.807	ENSPPYG00000019255	PUM3	99	52.807	Pongo_abelii
ENSORLG00015015906	pum3	99	47.720	ENSPCAG00000005797	PUM3	95	48.024	Procavia_capensis
ENSORLG00015015906	pum3	98	52.222	ENSPCOG00000027325	PUM3	94	53.175	Propithecus_coquereli
ENSORLG00015015906	pum3	99	51.657	ENSPVAG00000016135	PUM3	95	51.593	Pteropus_vampyrus
ENSORLG00015015906	pum3	100	72.546	ENSPNYG00000016124	pum3	100	72.546	Pundamilia_nyererei
ENSORLG00015015906	pum3	99	58.243	ENSPNAG00000026524	pum3	99	59.161	Pygocentrus_nattereri
ENSORLG00015015906	pum3	99	53.096	ENSRNOG00000048356	RGD1308750	96	53.406	Rattus_norvegicus
ENSORLG00015015906	pum3	99	53.251	ENSRNOG00000012574	Pum3	96	53.560	Rattus_norvegicus
ENSORLG00015015906	pum3	99	52.656	ENSRBIG00000036924	PUM3	99	52.959	Rhinopithecus_bieti
ENSORLG00015015906	pum3	99	52.807	ENSRROG00000041089	PUM3	99	53.111	Rhinopithecus_roxellana
ENSORLG00015015906	pum3	99	51.976	ENSSBOG00000028066	PUM3	99	52.656	Saimiri_boliviensis_boliviensis
ENSORLG00015015906	pum3	99	53.517	ENSSHAG00000003730	PUM3	99	53.425	Sarcophilus_harrisii
ENSORLG00015015906	pum3	99	57.960	ENSSFOG00015018778	pum3	99	57.960	Scleropages_formosus
ENSORLG00015015906	pum3	100	71.865	ENSSMAG00000013236	pum3	99	72.324	Scophthalmus_maximus
ENSORLG00015015906	pum3	100	73.163	ENSSDUG00000001887	pum3	99	74.213	Seriola_dumerili
ENSORLG00015015906	pum3	100	74.052	ENSSLDG00000015766	pum3	99	75.114	Seriola_lalandi_dorsalis
ENSORLG00015015906	pum3	93	51.400	ENSSARG00000000579	PUM3	96	51.565	Sorex_araneus
ENSORLG00015015906	pum3	99	52.656	ENSSPUG00000001707	PUM3	99	53.323	Sphenodon_punctatus
ENSORLG00015015906	pum3	100	74.652	ENSSPAG00000003976	pum3	100	74.652	Stegastes_partitus
ENSORLG00015015906	pum3	99	52.960	ENSSSCG00000005227	PUM3	99	52.190	Sus_scrofa
ENSORLG00015015906	pum3	97	53.541	ENSTGUG00000005339	PUM3	99	53.312	Taeniopygia_guttata
ENSORLG00015015906	pum3	100	71.233	ENSTRUG00000004074	pum3	99	71.233	Takifugu_rubripes
ENSORLG00015015906	pum3	99	70.388	ENSTNIG00000010325	pum3	98	70.388	Tetraodon_nigroviridis
ENSORLG00015015906	pum3	81	43.810	ENSTBEG00000013058	PUM3	86	43.210	Tupaia_belangeri
ENSORLG00015015906	pum3	99	48.212	ENSTTRG00000001062	PUM3	96	47.800	Tursiops_truncatus
ENSORLG00015015906	pum3	95	48.320	ENSUMAG00000018443	PUM3	99	55.283	Ursus_maritimus
ENSORLG00015015906	pum3	99	52.128	ENSVPAG00000010766	PUM3	99	52.128	Vicugna_pacos
ENSORLG00015015906	pum3	96	54.054	ENSVVUG00000006527	PUM3	99	51.672	Vulpes_vulpes
ENSORLG00015015906	pum3	93	50.000	ENSXETG00000011707	pum3	96	45.584	Xenopus_tropicalis
ENSORLG00015015906	pum3	95	67.590	ENSXCOG00000006725	pum3	100	67.590	Xiphophorus_couchianus
ENSORLG00015015906	pum3	100	68.364	ENSXMAG00000002926	pum3	100	68.364	Xiphophorus_maculatus