EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015015978 (Gene tree)
Gene ID: -
Gene Symbol: ptcd3
Alias: -
Full Name: pentatricopeptide repeat domain 3
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 6411 bases
Position: chr10:27213906-27220316
Accession: ZDB-GENE-030131-6849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015015061	PPR	PF01535.20	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015033735	-	1689	-	ENSORLP00015015061	562 (aa)	-	-

Gene Model

Click here to download ENSORLG00015015978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015015978's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015015978	ptcd3	99	61.102	ENSACIG00000022263	ptcd3	96	61.102	Amphilophus_citrinellus
ENSORLG00015015978	ptcd3	99	59.428	ENSAOCG00000017186	ptcd3	85	58.961	Amphiprion_ocellaris
ENSORLG00015015978	ptcd3	99	59.596	ENSAPEG00000016069	ptcd3	85	59.191	Amphiprion_percula
ENSORLG00015015978	ptcd3	99	40.033	ENSAPLG00000005086	PTCD3	96	39.309	Anas_platyrhynchos
ENSORLG00015015978	ptcd3	99	64.511	ENSACLG00000020653	ptcd3	87	63.516	Astatotilapia_calliptera
ENSORLG00015015978	ptcd3	99	46.734	ENSAMXG00000011570	ptcd3	87	46.734	Astyanax_mexicanus
ENSORLG00015015978	ptcd3	99	62.604	ENSCVAG00000020820	ptcd3	94	61.833	Cyprinodon_variegatus
ENSORLG00015015978	ptcd3	98	61.473	ENSGAFG00000015291	ptcd3	94	60.171	Gambusia_affinis
ENSORLG00015015978	ptcd3	99	64.874	ENSHBUG00000020056	ptcd3	92	63.866	Haplochromis_burtoni
ENSORLG00015015978	ptcd3	99	57.496	ENSLBEG00000015349	ptcd3	87	56.931	Labrus_bergylta
ENSORLG00015015978	ptcd3	99	64.511	ENSMZEG00005004980	ptcd3	87	63.516	Maylandia_zebra
ENSORLG00015015978	ptcd3	99	36.667	ENSMGAG00000013124	PTCD3	93	36.975	Meleagris_gallopavo
ENSORLG00015015978	ptcd3	99	59.532	ENSMALG00000013282	ptcd3	87	58.863	Monopterus_albus
ENSORLG00015015978	ptcd3	99	63.194	ENSNBRG00000000447	ptcd3	96	63.194	Neolamprologus_brichardi
ENSORLG00015015978	ptcd3	99	64.393	ENSONIG00000015886	ptcd3	90	62.791	Oreochromis_niloticus
ENSORLG00015015978	ptcd3	99	77.295	ENSORLG00000008776	ptcd3	88	77.129	Oryzias_latipes
ENSORLG00015015978	ptcd3	99	76.962	ENSORLG00020020676	ptcd3	86	76.795	Oryzias_latipes_hni
ENSORLG00015015978	ptcd3	99	59.766	ENSPFOG00000004442	ptcd3	90	59.766	Poecilia_formosa
ENSORLG00015015978	ptcd3	87	60.998	ENSPLAG00000021401	ptcd3	86	60.998	Poecilia_latipinna
ENSORLG00015015978	ptcd3	99	63.979	ENSPMEG00000007153	ptcd3	98	63.979	Poecilia_mexicana
ENSORLG00015015978	ptcd3	99	46.091	ENSSFOG00015019643	ptcd3	93	45.098	Scleropages_formosus
ENSORLG00015015978	ptcd3	87	44.084	ENSTGUG00000010760	PTCD3	95	43.269	Taeniopygia_guttata
ENSORLG00015015978	ptcd3	99	55.500	ENSTRUG00000003939	ptcd3	88	55.518	Takifugu_rubripes