EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015016047 (Gene tree)
Gene ID: -
Gene Symbol: zgc:101559
Alias: -
Full Name: zgc:101559
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 6294 bases
Position: chr21:9048035-9054328
Accession: ZDB-GENE-041114-122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015015157	MMR_HSR1	PF01926.23	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015022980	-	1607	-	ENSORLP00015015157	233 (aa)	-	-

Gene Model

Click here to download ENSORLG00015016047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015016047's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015016047	zgc:101559	85	62.679	ENSORLG00015012872	rab33ba	88	62.679
ENSORLG00015016047	zgc:101559	70	36.970	ENSORLG00015004033	rab23	71	39.189
ENSORLG00015016047	zgc:101559	63	40.523	ENSORLG00015015121	si:dkey-13a21.4	73	40.523
ENSORLG00015016047	zgc:101559	78	44.199	ENSORLG00015000618	-	84	44.199
ENSORLG00015016047	zgc:101559	69	33.540	ENSORLG00015008252	si:ch73-116o1.2	81	34.682
ENSORLG00015016047	zgc:101559	70	39.412	ENSORLG00015006820	-	79	39.412
ENSORLG00015016047	zgc:101559	71	36.047	ENSORLG00015020495	rasl11a	67	36.047
ENSORLG00015016047	zgc:101559	83	35.897	ENSORLG00015013564	-	96	35.385
ENSORLG00015016047	zgc:101559	69	38.889	ENSORLG00015006970	rab6ba	76	38.889
ENSORLG00015016047	zgc:101559	78	37.500	ENSORLG00015019569	rab25b	87	37.791
ENSORLG00015016047	zgc:101559	77	38.333	ENSORLG00015010257	rab11a	83	38.333
ENSORLG00015016047	zgc:101559	74	39.884	ENSORLG00015020173	rab11bb	78	39.884
ENSORLG00015016047	zgc:101559	72	35.928	ENSORLG00015011467	kras	90	36.313
ENSORLG00015016047	zgc:101559	84	47.222	ENSORLG00015013453	-	90	47.465
ENSORLG00015016047	zgc:101559	67	45.912	ENSORLG00015003202	RAB39B	74	45.912
ENSORLG00015016047	zgc:101559	73	39.181	ENSORLG00015021900	rab5c	76	39.181
ENSORLG00015016047	zgc:101559	62	33.108	ENSORLG00015002284	rerg	71	33.108
ENSORLG00015016047	zgc:101559	74	37.572	ENSORLG00015019591	rab11al	79	37.572
ENSORLG00015016047	zgc:101559	67	41.667	ENSORLG00015020900	rab2a	73	41.667
ENSORLG00015016047	zgc:101559	90	39.713	ENSORLG00015010042	rab35b	99	39.713
ENSORLG00015016047	zgc:101559	85	36.634	ENSORLG00015012725	rab25a	66	36.634
ENSORLG00015016047	zgc:101559	72	40.719	ENSORLG00015000893	-	75	40.719
ENSORLG00015016047	zgc:101559	74	33.140	ENSORLG00015003353	zgc:55558	96	33.696
ENSORLG00015016047	zgc:101559	74	39.306	ENSORLG00015016999	RAB11B	78	39.306
ENSORLG00015016047	zgc:101559	73	39.181	ENSORLG00015017737	rab5ab	77	39.181
ENSORLG00015016047	zgc:101559	50	35.897	ENSORLG00015014268	rabl2	50	35.897
ENSORLG00015016047	zgc:101559	84	37.563	ENSORLG00015013638	rab15	90	37.563
ENSORLG00015016047	zgc:101559	74	38.728	ENSORLG00015016946	rab11ba	64	38.728
ENSORLG00015016047	zgc:101559	63	39.189	ENSORLG00015006780	-	79	39.189
ENSORLG00015016047	zgc:101559	70	39.645	ENSORLG00015002344	-	79	39.645
ENSORLG00015016047	zgc:101559	63	40.816	ENSORLG00015004377	RAB15	70	40.816
ENSORLG00015016047	zgc:101559	69	41.358	ENSORLG00015006162	rab6a	76	41.358
ENSORLG00015016047	zgc:101559	99	56.652	ENSORLG00015015327	rab33a	84	56.652
ENSORLG00015016047	zgc:101559	63	37.162	ENSORLG00015002191	rheb	79	37.162
ENSORLG00015016047	zgc:101559	63	41.497	ENSORLG00015004739	rab18a	93	36.923
ENSORLG00015016047	zgc:101559	65	37.179	ENSORLG00015004265	rab9b	74	37.179
ENSORLG00015016047	zgc:101559	64	33.333	ENSORLG00015020441	-	75	33.333
ENSORLG00015016047	zgc:101559	63	32.667	ENSORLG00015010005	dnajc27	55	32.667
ENSORLG00015016047	zgc:101559	66	45.806	ENSORLG00015022289	-	72	45.806
ENSORLG00015016047	zgc:101559	78	44.751	ENSORLG00015010986	rab1ab	84	44.751
ENSORLG00015016047	zgc:101559	80	37.634	ENSORLG00015013537	rab6bb	87	37.634
ENSORLG00015016047	zgc:101559	66	38.961	ENSORLG00015014594	rab3db	69	38.961
ENSORLG00015016047	zgc:101559	63	41.892	ENSORLG00015000142	si:dkey-34d22.5	67	41.892
ENSORLG00015016047	zgc:101559	63	36.486	ENSORLG00015001298	rhebl1	79	36.486
ENSORLG00015016047	zgc:101559	66	40.909	ENSORLG00015004273	rab42a	70	40.909
ENSORLG00015016047	zgc:101559	63	40.136	ENSORLG00015007182	rab18b	71	40.136
ENSORLG00015016047	zgc:101559	72	49.102	ENSORLG00015020972	rab30	80	49.102
ENSORLG00015016047	zgc:101559	69	42.857	ENSORLG00015015518	-	77	42.857
ENSORLG00015016047	zgc:101559	72	40.120	ENSORLG00015006881	rab14	75	40.120
ENSORLG00015016047	zgc:101559	85	44.444	ENSORLG00015010098	zgc:171927	85	44.444
ENSORLG00015016047	zgc:101559	64	42.953	ENSORLG00015010161	RAB41	70	42.953
ENSORLG00015016047	zgc:101559	79	39.683	ENSORLG00015007869	rab12	76	39.683
ENSORLG00015016047	zgc:101559	73	40.936	ENSORLG00015012854	rab5aa	77	40.936

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015016047	zgc:101559	100	82.906	ENSAPOG00000007503	zgc:101559	100	82.906	Acanthochromis_polyacanthus
ENSORLG00015016047	zgc:101559	90	85.238	ENSACIG00000021459	zgc:101559	92	85.238	Amphilophus_citrinellus
ENSORLG00015016047	zgc:101559	100	82.479	ENSAOCG00000024675	zgc:101559	100	82.479	Amphiprion_ocellaris
ENSORLG00015016047	zgc:101559	100	82.479	ENSAPEG00000005176	zgc:101559	100	82.479	Amphiprion_percula
ENSORLG00015016047	zgc:101559	100	80.342	ENSATEG00000007761	zgc:101559	100	80.342	Anabas_testudineus
ENSORLG00015016047	zgc:101559	97	83.772	ENSACLG00000027006	zgc:101559	97	83.772	Astatotilapia_calliptera
ENSORLG00015016047	zgc:101559	99	73.276	ENSAMXG00000040460	zgc:101559	94	73.276	Astyanax_mexicanus
ENSORLG00015016047	zgc:101559	100	79.060	ENSCSEG00000006243	zgc:101559	100	79.060	Cynoglossus_semilaevis
ENSORLG00015016047	zgc:101559	100	83.333	ENSCVAG00000019227	zgc:101559	100	83.333	Cyprinodon_variegatus
ENSORLG00015016047	zgc:101559	100	71.368	ENSDARG00000003257	zgc:101559	100	71.368	Danio_rerio
ENSORLG00015016047	zgc:101559	100	82.051	ENSFHEG00000011483	zgc:101559	100	82.051	Fundulus_heteroclitus
ENSORLG00015016047	zgc:101559	91	78.302	ENSGMOG00000011665	zgc:101559	99	78.302	Gadus_morhua
ENSORLG00015016047	zgc:101559	100	81.624	ENSGAFG00000021202	zgc:101559	100	81.624	Gambusia_affinis
ENSORLG00015016047	zgc:101559	91	80.189	ENSGACG00000001725	zgc:101559	91	80.189	Gasterosteus_aculeatus
ENSORLG00015016047	zgc:101559	100	82.906	ENSHBUG00000007827	zgc:101559	100	82.906	Haplochromis_burtoni
ENSORLG00015016047	zgc:101559	100	75.000	ENSHCOG00000009133	zgc:101559	100	76.050	Hippocampus_comes
ENSORLG00015016047	zgc:101559	86	74.627	ENSIPUG00000022394	zgc:101559	87	74.627	Ictalurus_punctatus
ENSORLG00015016047	zgc:101559	100	77.447	ENSKMAG00000002862	zgc:101559	100	77.447	Kryptolebias_marmoratus
ENSORLG00015016047	zgc:101559	100	83.333	ENSLBEG00000025798	zgc:101559	100	83.333	Labrus_bergylta
ENSORLG00015016047	zgc:101559	88	67.317	ENSLACG00000011557	zgc:101559	89	67.317	Latimeria_chalumnae
ENSORLG00015016047	zgc:101559	100	68.240	ENSLOCG00000005904	zgc:101559	99	68.240	Lepisosteus_oculatus
ENSORLG00015016047	zgc:101559	100	80.769	ENSMAMG00000017431	zgc:101559	100	80.769	Mastacembelus_armatus
ENSORLG00015016047	zgc:101559	100	82.906	ENSMZEG00005021778	zgc:101559	100	82.906	Maylandia_zebra
ENSORLG00015016047	zgc:101559	100	78.205	ENSMMOG00000019779	zgc:101559	100	78.205	Mola_mola
ENSORLG00015016047	zgc:101559	100	79.060	ENSMALG00000003712	zgc:101559	100	79.060	Monopterus_albus
ENSORLG00015016047	zgc:101559	100	82.479	ENSNBRG00000002684	zgc:101559	100	82.479	Neolamprologus_brichardi
ENSORLG00015016047	zgc:101559	100	82.906	ENSONIG00000006715	-	100	82.906	Oreochromis_niloticus
ENSORLG00015016047	zgc:101559	100	99.571	ENSORLG00000030642	zgc:101559	100	99.571	Oryzias_latipes
ENSORLG00015016047	zgc:101559	100	98.712	ENSORLG00020012685	zgc:101559	100	98.712	Oryzias_latipes_hni
ENSORLG00015016047	zgc:101559	100	93.991	ENSOMEG00000013128	zgc:101559	100	93.991	Oryzias_melastigma
ENSORLG00015016047	zgc:101559	85	76.500	ENSPKIG00000013397	zgc:101559	84	76.500	Paramormyrops_kingsleyae
ENSORLG00015016047	zgc:101559	100	82.906	ENSPFOG00000009101	-	100	82.906	Poecilia_formosa
ENSORLG00015016047	zgc:101559	100	82.906	ENSPLAG00000020627	zgc:101559	100	82.906	Poecilia_latipinna
ENSORLG00015016047	zgc:101559	100	82.906	ENSPMEG00000010152	zgc:101559	100	82.906	Poecilia_mexicana
ENSORLG00015016047	zgc:101559	100	82.479	ENSPREG00000007017	zgc:101559	100	82.479	Poecilia_reticulata
ENSORLG00015016047	zgc:101559	100	82.906	ENSPNYG00000012922	zgc:101559	100	82.906	Pundamilia_nyererei
ENSORLG00015016047	zgc:101559	100	72.222	ENSPNAG00000017856	zgc:101559	100	72.222	Pygocentrus_nattereri
ENSORLG00015016047	zgc:101559	100	69.787	ENSSFOG00015006175	zgc:101559	100	69.787	Scleropages_formosus
ENSORLG00015016047	zgc:101559	99	78.879	ENSSMAG00000002229	zgc:101559	98	78.879	Scophthalmus_maximus
ENSORLG00015016047	zgc:101559	100	84.188	ENSSDUG00000008151	zgc:101559	100	84.188	Seriola_dumerili
ENSORLG00015016047	zgc:101559	100	83.761	ENSSLDG00000019214	zgc:101559	100	83.761	Seriola_lalandi_dorsalis
ENSORLG00015016047	zgc:101559	100	82.906	ENSSPAG00000006404	zgc:101559	100	82.906	Stegastes_partitus
ENSORLG00015016047	zgc:101559	100	79.487	ENSTRUG00000009903	zgc:101559	100	79.487	Takifugu_rubripes
ENSORLG00015016047	zgc:101559	93	79.358	ENSTNIG00000015000	zgc:101559	100	75.000	Tetraodon_nigroviridis
ENSORLG00015016047	zgc:101559	100	82.906	ENSXCOG00000018683	zgc:101559	100	82.906	Xiphophorus_couchianus
ENSORLG00015016047	zgc:101559	100	83.761	ENSXMAG00000011171	zgc:101559	100	83.761	Xiphophorus_maculatus