EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015016157 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 2219 bases
Position: chr10:7642633-7644851
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015031747	RRM_1	PF00076.22	1.8e-33	1	2
ENSORLP00015031747	RRM_1	PF00076.22	1.8e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015023119	-	867	-	ENSORLP00015031747	288 (aa)	-	-

Gene Model

Click here to download ENSORLG00015016157's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015016157's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015016157	-	60	31.579	ENSORLG00015017343	tardbp	50	31.579
ENSORLG00015016157	-	71	98.137	ENSORLG00015015204	-	72	98.137
ENSORLG00015016157	-	60	39.362	ENSORLG00015022877	hnrnpaba	53	39.362
ENSORLG00015016157	-	98	96.454	ENSORLG00015015185	-	97	96.454
ENSORLG00015016157	-	78	94.643	ENSORLG00015015182	-	97	94.643
ENSORLG00015016157	-	99	87.108	ENSORLG00015016236	HNRNPA0	95	87.108
ENSORLG00015016157	-	72	32.867	ENSORLG00015005048	tardbpl	68	31.579
ENSORLG00015016157	-	61	39.773	ENSORLG00015014131	hnrnpabb	57	39.773
ENSORLG00015016157	-	57	36.232	ENSORLG00015010143	elavl4	54	36.232
ENSORLG00015016157	-	99	87.296	ENSORLG00015016507	-	95	88.274
ENSORLG00015016157	-	60	35.294	ENSORLG00015004592	msi2a	59	35.294
ENSORLG00015016157	-	100	93.645	ENSORLG00015016169	HNRNPA0	100	93.645
ENSORLG00015016157	-	63	48.045	ENSORLG00015014774	hnrnpa3	91	39.610
ENSORLG00015016157	-	100	80.268	ENSORLG00015017144	-	99	79.264
ENSORLG00015016157	-	62	51.429	ENSORLG00015022294	-	54	51.429
ENSORLG00015016157	-	60	58.382	ENSORLG00015016302	HNRNPA0	92	46.599
ENSORLG00015016157	-	71	35.870	ENSORLG00015003916	MSI1	60	35.870
ENSORLG00015016157	-	61	32.240	ENSORLG00015002382	hnrnpd	78	34.104

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015016157	-	60	61.272	ENSG00000177733	HNRNPA0	94	48.311	Homo_sapiens
ENSORLG00015016157	-	74	67.442	ENSAPOG00000003387	HNRNPA0	71	67.788	Acanthochromis_polyacanthus
ENSORLG00015016157	-	62	50.568	ENSAPOG00000014678	-	95	40.694	Acanthochromis_polyacanthus
ENSORLG00015016157	-	63	50.279	ENSAPOG00000003688	hnrnpa3	88	41.883	Acanthochromis_polyacanthus
ENSORLG00015016157	-	60	60.694	ENSAPOG00000003364	HNRNPA0	92	49.135	Acanthochromis_polyacanthus
ENSORLG00015016157	-	63	50.556	ENSAPOG00000003641	hnrnpa3	73	50.556	Acanthochromis_polyacanthus
ENSORLG00015016157	-	60	60.920	ENSAMEG00000016316	HNRNPA0	65	55.721	Ailuropoda_melanoleuca
ENSORLG00015016157	-	62	50.000	ENSAMEG00000004293	-	91	39.841	Ailuropoda_melanoleuca
ENSORLG00015016157	-	65	72.581	ENSACIG00000021834	HNRNPA0	94	68.868	Amphilophus_citrinellus
ENSORLG00015016157	-	63	50.279	ENSAOCG00000004095	hnrnpa3	88	42.020	Amphiprion_ocellaris
ENSORLG00015016157	-	63	50.279	ENSAPEG00000022522	hnrnpa3	88	42.020	Amphiprion_percula
ENSORLG00015016157	-	63	50.279	ENSATEG00000015304	hnrnpa3	94	42.020	Anabas_testudineus
ENSORLG00015016157	-	61	59.429	ENSATEG00000003526	-	94	59.429	Anabas_testudineus
ENSORLG00015016157	-	63	51.955	ENSACAG00000012234	-	91	40.244	Anolis_carolinensis
ENSORLG00015016157	-	60	60.920	ENSANAG00000017086	HNRNPA0	93	47.619	Aotus_nancymaae
ENSORLG00015016157	-	61	50.286	ENSANAG00000037918	-	92	40.426	Aotus_nancymaae
ENSORLG00015016157	-	69	61.809	ENSACLG00000008973	HNRNPA0	93	58.621	Astatotilapia_calliptera
ENSORLG00015016157	-	63	50.279	ENSACLG00000008532	hnrnpa3	93	42.857	Astatotilapia_calliptera
ENSORLG00015016157	-	63	51.955	ENSAMXG00000007065	hnrnpa3	53	51.955	Astyanax_mexicanus
ENSORLG00015016157	-	60	60.920	ENSBTAG00000016929	HNRNPA0	90	47.440	Bos_taurus
ENSORLG00015016157	-	60	60.920	ENSCJAG00000006112	HNRNPA0	94	46.801	Callithrix_jacchus
ENSORLG00015016157	-	62	49.714	ENSCJAG00000013830	-	72	40.288	Callithrix_jacchus
ENSORLG00015016157	-	60	60.920	ENSCAFG00000001132	HNRNPA0	94	47.333	Canis_familiaris
ENSORLG00015016157	-	60	60.920	ENSCAFG00020008142	HNRNPA0	94	47.333	Canis_lupus_dingo
ENSORLG00015016157	-	60	60.920	ENSCHIG00000002602	HNRNPA0	94	47.458	Capra_hircus
ENSORLG00015016157	-	61	61.143	ENSCPOG00000026092	HNRNPA0	94	48.299	Cavia_porcellus
ENSORLG00015016157	-	60	60.920	ENSCCAG00000010302	HNRNPA0	93	47.973	Cebus_capucinus
ENSORLG00015016157	-	62	43.429	ENSCATG00000038569	-	54	43.182	Cercocebus_atys
ENSORLG00015016157	-	60	61.272	ENSCATG00000021167	HNRNPA0	93	47.973	Cercocebus_atys
ENSORLG00015016157	-	60	60.920	ENSCLAG00000015132	HNRNPA0	94	48.592	Chinchilla_lanigera
ENSORLG00015016157	-	60	61.272	ENSCSAG00000000499	HNRNPA0	94	48.649	Chlorocebus_sabaeus
ENSORLG00015016157	-	60	60.920	ENSCPBG00000008738	HNRNPA0	94	45.695	Chrysemys_picta_bellii
ENSORLG00015016157	-	60	61.272	ENSCANG00000038062	HNRNPA0	93	48.649	Colobus_angolensis_palliatus
ENSORLG00015016157	-	62	49.714	ENSCANG00000017881	-	96	40.122	Colobus_angolensis_palliatus
ENSORLG00015016157	-	61	42.286	ENSCGRG00001010070	-	88	35.971	Cricetulus_griseus_chok1gshd
ENSORLG00015016157	-	61	61.143	ENSCGRG00001005548	Hnrnpa0	93	46.939	Cricetulus_griseus_chok1gshd
ENSORLG00015016157	-	61	42.286	ENSCGRG00000007592	-	86	36.331	Cricetulus_griseus_crigri
ENSORLG00015016157	-	61	47.701	ENSCGRG00000003686	-	61	47.701	Cricetulus_griseus_crigri
ENSORLG00015016157	-	63	48.603	ENSCVAG00000018995	hnrnpa3	91	41.234	Cyprinodon_variegatus
ENSORLG00015016157	-	63	50.838	ENSDARG00000059351	hnrnpa3	94	40.532	Danio_rerio
ENSORLG00015016157	-	62	50.857	ENSDNOG00000031964	-	85	41.522	Dasypus_novemcinctus
ENSORLG00015016157	-	60	60.920	ENSDNOG00000030903	HNRNPA0	93	47.826	Dasypus_novemcinctus
ENSORLG00015016157	-	61	42.857	ENSDORG00000023528	-	86	37.304	Dipodomys_ordii
ENSORLG00015016157	-	61	40.571	ENSETEG00000007747	-	94	35.135	Echinops_telfairi
ENSORLG00015016157	-	61	49.143	ENSEBUG00000009297	HNRNPA0	55	48.864	Eptatretus_burgeri
ENSORLG00015016157	-	60	49.419	ENSEBUG00000016570	HNRNPA0	93	39.936	Eptatretus_burgeri
ENSORLG00015016157	-	60	60.920	ENSECAG00000032164	HNRNPA0	94	48.464	Equus_caballus
ENSORLG00015016157	-	62	48.603	ENSELUG00000023080	hnrnpa3	91	42.254	Esox_lucius
ENSORLG00015016157	-	60	60.920	ENSFCAG00000040261	HNRNPA0	95	49.485	Felis_catus
ENSORLG00015016157	-	61	61.143	ENSFALG00000014395	HNRNPA0	91	46.844	Ficedula_albicollis
ENSORLG00015016157	-	61	44.000	ENSFDAG00000014067	-	52	43.094	Fukomys_damarensis
ENSORLG00015016157	-	61	61.143	ENSFDAG00000019780	HNRNPA0	73	60.795	Fukomys_damarensis
ENSORLG00015016157	-	61	33.714	ENSFDAG00000009547	-	75	30.851	Fukomys_damarensis
ENSORLG00015016157	-	61	40.000	ENSFDAG00000018739	-	84	35.275	Fukomys_damarensis
ENSORLG00015016157	-	61	57.386	ENSFHEG00000008390	HNRNPA0	86	44.408	Fundulus_heteroclitus
ENSORLG00015016157	-	65	66.310	ENSFHEG00000008384	HNRNPA0	92	66.310	Fundulus_heteroclitus
ENSORLG00015016157	-	63	63.536	ENSGMOG00000016232	HNRNPA0	98	51.056	Gadus_morhua
ENSORLG00015016157	-	61	61.143	ENSGALG00000006160	HNRNPA0	95	48.639	Gallus_gallus
ENSORLG00015016157	-	63	50.350	ENSGACG00000004477	hnrnpa3	93	43.007	Gasterosteus_aculeatus
ENSORLG00015016157	-	60	60.920	ENSGAGG00000005632	HNRNPA0	94	46.026	Gopherus_agassizii
ENSORLG00015016157	-	65	72.581	ENSHBUG00000023868	HNRNPA0	73	72.727	Haplochromis_burtoni
ENSORLG00015016157	-	63	50.279	ENSHBUG00000019734	hnrnpa3	93	42.345	Haplochromis_burtoni
ENSORLG00015016157	-	61	61.143	ENSHGLG00000018216	HNRNPA0	94	49.315	Heterocephalus_glaber_female
ENSORLG00015016157	-	61	47.429	ENSHGLG00000014577	-	64	46.927	Heterocephalus_glaber_female
ENSORLG00015016157	-	75	40.991	ENSHGLG00100001336	-	93	38.906	Heterocephalus_glaber_male
ENSORLG00015016157	-	62	52.000	ENSHGLG00100006677	-	96	42.903	Heterocephalus_glaber_male
ENSORLG00015016157	-	61	70.060	ENSHCOG00000007174	HNRNPA0	90	70.060	Hippocampus_comes
ENSORLG00015016157	-	75	43.290	ENSIPUG00000019815	RO32	93	42.434	Ictalurus_punctatus
ENSORLG00015016157	-	61	38.857	ENSSTOG00000019374	-	95	33.746	Ictidomys_tridecemlineatus
ENSORLG00015016157	-	61	61.143	ENSJJAG00000006954	Hnrnpa0	94	47.887	Jaculus_jaculus
ENSORLG00015016157	-	63	49.721	ENSKMAG00000015973	hnrnpa3	94	41.158	Kryptolebias_marmoratus
ENSORLG00015016157	-	63	49.162	ENSLBEG00000016767	hnrnpa3	93	40.260	Labrus_bergylta
ENSORLG00015016157	-	62	56.180	ENSLACG00000014480	HNRNPA0	65	55.080	Latimeria_chalumnae
ENSORLG00015016157	-	62	49.714	ENSLACG00000008189	hnrnpa3	76	38.596	Latimeria_chalumnae
ENSORLG00015016157	-	62	51.705	ENSLOCG00000006986	hnrnpa3	95	39.628	Lepisosteus_oculatus
ENSORLG00015016157	-	62	51.429	ENSLOCG00000006476	-	51	50.000	Lepisosteus_oculatus
ENSORLG00015016157	-	66	45.503	ENSLAFG00000027712	-	88	38.710	Loxodonta_africana
ENSORLG00015016157	-	60	61.272	ENSMFAG00000030522	HNRNPA0	93	48.649	Macaca_fascicularis
ENSORLG00015016157	-	60	61.272	ENSMNEG00000015863	HNRNPA0	93	48.649	Macaca_nemestrina
ENSORLG00015016157	-	60	42.775	ENSMNEG00000038943	-	68	42.857	Macaca_nemestrina
ENSORLG00015016157	-	60	61.272	ENSMLEG00000026629	HNRNPA0	93	48.311	Mandrillus_leucophaeus
ENSORLG00015016157	-	63	43.429	ENSMLEG00000033415	-	50	43.750	Mandrillus_leucophaeus
ENSORLG00015016157	-	69	69.849	ENSMAMG00000017754	HNRNPA0	97	64.062	Mastacembelus_armatus
ENSORLG00015016157	-	63	50.279	ENSMZEG00005004663	hnrnpa3	93	42.857	Maylandia_zebra
ENSORLG00015016157	-	69	61.809	ENSMZEG00005001055	HNRNPA0	93	58.621	Maylandia_zebra
ENSORLG00015016157	-	60	60.920	ENSMAUG00000018485	Hnrnpa0	94	46.181	Mesocricetus_auratus
ENSORLG00015016157	-	60	55.172	ENSMODG00000002463	-	95	55.491	Monodelphis_domestica
ENSORLG00015016157	-	60	60.920	ENSMODG00000014720	HNRNPA0	67	60.920	Monodelphis_domestica
ENSORLG00015016157	-	63	49.721	ENSMALG00000009691	hnrnpa3	95	40.984	Monopterus_albus
ENSORLG00015016157	-	60	60.920	MGP_CAROLIEiJ_G0018593	Hnrnpa0	94	44.551	Mus_caroli
ENSORLG00015016157	-	60	60.920	ENSMUSG00000007836	Hnrnpa0	95	47.297	Mus_musculus
ENSORLG00015016157	-	60	60.920	MGP_SPRETEiJ_G0019473	Hnrnpa0	94	46.128	Mus_spretus
ENSORLG00015016157	-	60	60.920	ENSMPUG00000019790	HNRNPA0	94	47.475	Mustela_putorius_furo
ENSORLG00015016157	-	60	59.195	ENSMLUG00000028644	-	94	44.444	Myotis_lucifugus
ENSORLG00015016157	-	60	60.920	ENSMLUG00000012683	-	93	48.464	Myotis_lucifugus
ENSORLG00015016157	-	58	44.048	ENSNGAG00000001008	-	75	34.899	Nannospalax_galili
ENSORLG00015016157	-	60	60.920	ENSNGAG00000008883	Hnrnpa0	94	48.276	Nannospalax_galili
ENSORLG00015016157	-	60	61.272	ENSNLEG00000008518	HNRNPA0	93	49.324	Nomascus_leucogenys
ENSORLG00015016157	-	74	43.519	ENSNLEG00000027151	-	93	42.500	Nomascus_leucogenys
ENSORLG00015016157	-	60	60.920	ENSMEUG00000013675	HNRNPA0	93	47.651	Notamacropus_eugenii
ENSORLG00015016157	-	62	51.429	ENSODEG00000016578	-	85	42.908	Octodon_degus
ENSORLG00015016157	-	61	61.143	ENSODEG00000019566	HNRNPA0	94	47.855	Octodon_degus
ENSORLG00015016157	-	63	50.279	ENSONIG00000008607	hnrnpa3	90	39.873	Oreochromis_niloticus
ENSORLG00015016157	-	68	67.347	ENSORLG00000025015	-	70	65.842	Oryzias_latipes
ENSORLG00015016157	-	68	67.347	ENSORLG00000025332	-	70	65.842	Oryzias_latipes
ENSORLG00015016157	-	63	48.045	ENSORLG00000017561	hnrnpa3	94	39.610	Oryzias_latipes
ENSORLG00015016157	-	63	94.972	ENSORLG00000027074	-	79	94.972	Oryzias_latipes
ENSORLG00015016157	-	100	90.667	ENSORLG00020007505	-	100	91.000	Oryzias_latipes_hni
ENSORLG00015016157	-	98	89.803	ENSORLG00020007109	-	99	89.803	Oryzias_latipes_hni
ENSORLG00015016157	-	63	48.603	ENSORLG00020020788	hnrnpa3	94	39.935	Oryzias_latipes_hni
ENSORLG00015016157	-	99	89.262	ENSORLG00020008203	-	98	91.126	Oryzias_latipes_hni
ENSORLG00015016157	-	93	59.075	ENSORLG00020022487	-	88	60.156	Oryzias_latipes_hni
ENSORLG00015016157	-	63	49.162	ENSOMEG00000004838	hnrnpa3	93	40.909	Oryzias_melastigma
ENSORLG00015016157	-	60	60.920	ENSOGAG00000025754	HNRNPA0	74	60.227	Otolemur_garnettii
ENSORLG00015016157	-	60	60.920	ENSOARG00000015434	HNRNPA0	92	48.264	Ovis_aries
ENSORLG00015016157	-	60	61.272	ENSPPAG00000005303	HNRNPA0	93	48.986	Pan_paniscus
ENSORLG00015016157	-	60	60.920	ENSPPRG00000014655	HNRNPA0	94	48.986	Panthera_pardus
ENSORLG00015016157	-	60	61.272	ENSPTRG00000017273	HNRNPA0	93	48.986	Pan_troglodytes
ENSORLG00015016157	-	60	61.272	ENSPANG00000012900	HNRNPA0	93	48.311	Papio_anubis
ENSORLG00015016157	-	61	63.636	ENSPKIG00000020281	-	82	53.357	Paramormyrops_kingsleyae
ENSORLG00015016157	-	61	64.205	ENSPKIG00000020270	HNRNPA0	93	54.444	Paramormyrops_kingsleyae
ENSORLG00015016157	-	63	52.817	ENSPKIG00000022916	hnrnpa3	67	51.955	Paramormyrops_kingsleyae
ENSORLG00015016157	-	63	49.162	ENSPMGG00000000747	hnrnpa3	95	39.935	Periophthalmus_magnuspinnatus
ENSORLG00015016157	-	75	54.839	ENSPEMG00000020274	Hnrnpa0	93	46.127	Peromyscus_maniculatus_bairdii
ENSORLG00015016157	-	61	50.282	ENSPMAG00000004449	-	77	50.282	Petromyzon_marinus
ENSORLG00015016157	-	63	49.162	ENSPFOG00000014049	hnrnpa3	94	39.432	Poecilia_formosa
ENSORLG00015016157	-	60	58.480	ENSPLAG00000015223	-	90	47.782	Poecilia_latipinna
ENSORLG00015016157	-	59	73.529	ENSPMEG00000017025	HNRNPA0	92	73.529	Poecilia_mexicana
ENSORLG00015016157	-	63	49.162	ENSPMEG00000006390	hnrnpa3	94	39.432	Poecilia_mexicana
ENSORLG00015016157	-	61	72.327	ENSPREG00000010619	HNRNPA0	75	72.327	Poecilia_reticulata
ENSORLG00015016157	-	63	49.162	ENSPREG00000005411	hnrnpa3	94	41.042	Poecilia_reticulata
ENSORLG00015016157	-	59	51.333	ENSPPYG00000012967	-	81	51.333	Pongo_abelii
ENSORLG00015016157	-	61	50.857	ENSPPYG00000001012	-	92	40.206	Pongo_abelii
ENSORLG00015016157	-	60	61.272	ENSPPYG00000015814	HNRNPA0	94	48.311	Pongo_abelii
ENSORLG00015016157	-	62	50.568	ENSPNYG00000008424	hnrnpa3	79	49.438	Pundamilia_nyererei
ENSORLG00015016157	-	61	62.500	ENSPNAG00000023333	HNRNPA0	92	53.091	Pygocentrus_nattereri
ENSORLG00015016157	-	60	61.272	ENSRBIG00000023673	HNRNPA0	92	47.841	Rhinopithecus_bieti
ENSORLG00015016157	-	60	61.272	ENSRROG00000002558	HNRNPA0	92	47.841	Rhinopithecus_roxellana
ENSORLG00015016157	-	62	45.810	ENSRROG00000034643	-	90	40.190	Rhinopithecus_roxellana
ENSORLG00015016157	-	60	63.218	ENSSFOG00015002650	HNRNPA0	71	63.636	Scleropages_formosus
ENSORLG00015016157	-	65	50.811	ENSSFOG00015016280	hnrnpa1	92	42.038	Scleropages_formosus
ENSORLG00015016157	-	58	32.530	ENSSFOG00015001814	hnrnpa3	75	42.545	Scleropages_formosus
ENSORLG00015016157	-	63	48.603	ENSSMAG00000015218	hnrnpa3	86	39.498	Scophthalmus_maximus
ENSORLG00015016157	-	63	49.721	ENSSDUG00000000381	hnrnpa3	94	43.554	Seriola_dumerili
ENSORLG00015016157	-	60	60.920	ENSSPUG00000016613	HNRNPA0	94	46.959	Sphenodon_punctatus
ENSORLG00015016157	-	60	59.538	ENSSPAG00000001272	-	81	49.296	Stegastes_partitus
ENSORLG00015016157	-	63	50.279	ENSSPAG00000008969	hnrnpa3	94	41.270	Stegastes_partitus
ENSORLG00015016157	-	63	41.758	ENSSSCG00000033635	-	58	41.758	Sus_scrofa
ENSORLG00015016157	-	63	41.758	ENSSSCG00000040926	-	58	41.758	Sus_scrofa
ENSORLG00015016157	-	61	57.714	ENSTGUG00000001186	HNRNPA0	95	44.371	Taeniopygia_guttata
ENSORLG00015016157	-	62	49.162	ENSTRUG00000017504	hnrnpa3	93	41.290	Takifugu_rubripes
ENSORLG00015016157	-	60	58.382	ENSTRUG00000021494	-	93	47.440	Takifugu_rubripes
ENSORLG00015016157	-	80	40.167	ENSTNIG00000016958	hnrnpa3	95	41.066	Tetraodon_nigroviridis
ENSORLG00015016157	-	60	60.920	ENSTTRG00000000499	HNRNPA0	94	47.475	Tursiops_truncatus
ENSORLG00015016157	-	60	60.920	ENSVVUG00000014736	HNRNPA0	94	47.315	Vulpes_vulpes
ENSORLG00015016157	-	63	58.470	ENSXETG00000003833	hnrnpa0	59	58.470	Xenopus_tropicalis
ENSORLG00015016157	-	63	52.514	ENSXETG00000001806	hnrnpa3	51	52.514	Xenopus_tropicalis
ENSORLG00015016157	-	63	49.162	ENSXMAG00000000439	hnrnpa3	94	41.368	Xiphophorus_maculatus
ENSORLG00015016157	-	61	58.523	ENSXMAG00000029150	HNRNPA0	93	47.508	Xiphophorus_maculatus
ENSORLG00015016157	-	59	73.099	ENSXMAG00000019804	HNRNPA0	91	73.099	Xiphophorus_maculatus