EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015016270 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 5993 bases
Position: chr17:23767350-23773342
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015031816	PRP38	PF03371.15	8.1e-55	1	1
ENSORLP00015031806	PRP38	PF03371.15	2.4e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015023565	-	2590	-	ENSORLP00015031816	458 (aa)	-	-
ENSORLT00015033857	-	621	-	ENSORLP00015031806	206 (aa)	-	-

Gene Model

Click here to download ENSORLG00015016270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015016270's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015016270	-	80	96.970	ENSACIG00000016459	-	96	96.970	Amphilophus_citrinellus
ENSORLG00015016270	-	100	87.284	ENSATEG00000014482	-	100	87.500	Anabas_testudineus
ENSORLG00015016270	-	74	92.810	ENSAMXG00000039494	-	51	84.589	Astyanax_mexicanus
ENSORLG00015016270	-	74	91.558	ENSBTAG00000047874	PRPF38B	93	60.742	Bos_taurus
ENSORLG00015016270	-	71	55.479	WBGene00022434	Y108G3AL.2	81	44.030	Caenorhabditis_elegans
ENSORLG00015016270	-	66	91.912	ENSCAFG00020010992	-	91	57.480	Canis_lupus_dingo
ENSORLG00015016270	-	74	91.558	ENSCHIG00000024357	-	93	60.742	Capra_hircus
ENSORLG00015016270	-	71	94.558	ENSCPOG00000039545	-	81	65.132	Cavia_porcellus
ENSORLG00015016270	-	71	94.558	ENSCLAG00000005801	-	81	64.706	Chinchilla_lanigera
ENSORLG00015016270	-	56	92.241	ENSCHOG00000008972	-	98	61.190	Choloepus_hoffmanni
ENSORLG00015016270	-	77	89.375	ENSCPBG00000028299	-	83	65.032	Chrysemys_picta_bellii
ENSORLG00015016270	-	70	73.793	ENSCSAVG00000009443	-	71	73.958	Ciona_savignyi
ENSORLG00015016270	-	100	82.468	ENSCSEG00000015030	-	100	82.684	Cynoglossus_semilaevis
ENSORLG00015016270	-	99	93.659	ENSCVAG00000005543	-	99	93.659	Cyprinodon_variegatus
ENSORLG00015016270	-	76	70.513	FBgn0030468	CG1622	93	70.229	Drosophila_melanogaster
ENSORLG00015016270	-	70	93.103	ENSETEG00000014690	-	92	61.486	Echinops_telfairi
ENSORLG00015016270	-	80	88.757	ENSELUG00000010390	-	97	66.602	Esox_lucius
ENSORLG00015016270	-	80	91.463	ENSGMOG00000012080	-	99	72.000	Gadus_morhua
ENSORLG00015016270	-	77	89.873	ENSGALG00000001972	-	92	63.189	Gallus_gallus
ENSORLG00015016270	-	100	81.466	ENSGAFG00000008943	-	100	82.328	Gambusia_affinis
ENSORLG00015016270	-	77	89.375	ENSGAGG00000001563	-	83	66.167	Gopherus_agassizii
ENSORLG00015016270	-	71	94.558	ENSHGLG00000016583	PRPF38B	92	60.707	Heterocephalus_glaber_female
ENSORLG00015016270	-	71	94.558	ENSHGLG00100015525	-	92	60.511	Heterocephalus_glaber_male
ENSORLG00015016270	-	100	81.169	ENSHCOG00000001071	-	100	81.169	Hippocampus_comes
ENSORLG00015016270	-	100	84.144	ENSKMAG00000005540	-	100	84.355	Kryptolebias_marmoratus
ENSORLG00015016270	-	71	93.197	ENSLACG00000015511	-	97	60.152	Latimeria_chalumnae
ENSORLG00015016270	-	74	92.157	ENSMOCG00000020285	-	82	63.853	Microtus_ochrogaster
ENSORLG00015016270	-	100	82.227	ENSMMOG00000011639	-	100	83.084	Mola_mola
ENSORLG00015016270	-	71	94.558	ENSMODG00000002350	-	87	85.091	Monodelphis_domestica
ENSORLG00015016270	-	100	86.853	ENSMALG00000019479	-	100	86.853	Monopterus_albus
ENSORLG00015016270	-	80	96.970	ENSNBRG00000019221	-	98	96.970	Neolamprologus_brichardi
ENSORLG00015016270	-	100	85.011	ENSONIG00000010129	-	100	84.052	Oreochromis_niloticus
ENSORLG00015016270	-	74	92.208	ENSOANG00000007343	-	92	60.217	Ornithorhynchus_anatinus
ENSORLG00015016270	-	100	99.345	ENSORLG00000015621	-	100	100.000	Oryzias_latipes
ENSORLG00015016270	-	100	99.345	ENSORLG00020016276	-	100	100.000	Oryzias_latipes_hni
ENSORLG00015016270	-	100	96.288	ENSOMEG00000022050	-	100	99.457	Oryzias_melastigma
ENSORLG00015016270	-	71	94.558	ENSOGAG00000027048	-	80	65.275	Otolemur_garnettii
ENSORLG00015016270	-	69	95.070	ENSOARG00000018899	-	90	61.963	Ovis_aries
ENSORLG00015016270	-	74	94.771	ENSPKIG00000004815	-	94	65.344	Paramormyrops_kingsleyae
ENSORLG00015016270	-	80	90.419	ENSPKIG00000017291	-	90	64.815	Paramormyrops_kingsleyae
ENSORLG00015016270	-	77	89.375	ENSPSIG00000016569	-	81	64.363	Pelodiscus_sinensis
ENSORLG00015016270	-	78	91.304	ENSPMGG00000017585	-	98	93.038	Periophthalmus_magnuspinnatus
ENSORLG00015016270	-	69	79.592	ENSPMAG00000007150	-	94	79.054	Petromyzon_marinus
ENSORLG00015016270	-	90	97.312	ENSPFOG00000004025	-	98	97.312	Poecilia_formosa
ENSORLG00015016270	-	100	83.190	ENSPLAG00000019842	-	100	81.897	Poecilia_latipinna
ENSORLG00015016270	-	100	83.190	ENSPMEG00000004807	-	97	81.897	Poecilia_mexicana
ENSORLG00015016270	-	89	97.268	ENSPREG00000015599	-	99	97.268	Poecilia_reticulata
ENSORLG00015016270	-	74	92.157	ENSPNAG00000017484	-	95	65.112	Pygocentrus_nattereri
ENSORLG00015016270	-	71	94.558	ENSRNOG00000020438	Prpf38b	82	64.488	Rattus_norvegicus
ENSORLG00015016270	-	82	83.333	ENSSFOG00015004405	-	99	80.435	Scleropages_formosus
ENSORLG00015016270	-	88	86.813	ENSSFOG00015011251	-	95	86.813	Scleropages_formosus
ENSORLG00015016270	-	89	95.628	ENSSMAG00000001781	-	99	95.628	Scophthalmus_maximus
ENSORLG00015016270	-	89	97.268	ENSSDUG00000016574	-	99	97.268	Seriola_dumerili
ENSORLG00015016270	-	100	86.938	ENSSLDG00000023487	-	99	97.268	Seriola_lalandi_dorsalis
ENSORLG00015016270	-	76	89.873	ENSSPUG00000017742	-	91	62.109	Sphenodon_punctatus
ENSORLG00015016270	-	99	81.857	ENSTRUG00000011765	-	100	83.441	Takifugu_rubripes
ENSORLG00015016270	-	79	94.479	ENSTNIG00000015299	-	99	70.370	Tetraodon_nigroviridis
ENSORLG00015016270	-	71	77.551	ENSTBEG00000007504	-	85	60.045	Tupaia_belangeri
ENSORLG00015016270	-	71	94.558	ENSTTRG00000006479	-	93	60.624	Tursiops_truncatus
ENSORLG00015016270	-	69	69.231	ENSVPAG00000005541	-	92	54.743	Vicugna_pacos
ENSORLG00015016270	-	74	92.810	ENSXETG00000005260	prpf38b	96	60.279	Xenopus_tropicalis
ENSORLG00015016270	-	100	82.869	ENSXCOG00000008329	-	100	82.328	Xiphophorus_couchianus
ENSORLG00015016270	-	100	83.940	ENSXMAG00000023831	-	100	81.897	Xiphophorus_maculatus