EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015016507 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 3333 bases
Position: chr10:7489741-7493073
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015015588	RRM_1	PF00076.22	9.1e-33	1	2
ENSORLP00015015588	RRM_1	PF00076.22	9.1e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015023547	-	972	-	ENSORLP00015015588	323 (aa)	-	-

Gene Model

Click here to download ENSORLG00015016507's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015016507's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015016507	-	56	49.451	ENSORLG00015014774	hnrnpa3	91	41.250
ENSORLG00015016507	-	51	40.541	ENSORLG00015002382	hnrnpd	80	33.526
ENSORLG00015016507	-	58	38.636	ENSORLG00015022877	hnrnpaba	53	38.636
ENSORLG00015016507	-	95	92.182	ENSORLG00015016169	HNRNPA0	99	92.182
ENSORLG00015016507	-	55	38.462	ENSORLG00015010671	dazap1	50	38.462
ENSORLG00015016507	-	95	88.274	ENSORLG00015016157	-	99	87.296
ENSORLG00015016507	-	59	35.897	ENSORLG00015003916	MSI1	59	35.484
ENSORLG00015016507	-	55	52.542	ENSORLG00015022294	-	88	42.122
ENSORLG00015016507	-	95	80.130	ENSORLG00015016236	HNRNPA0	95	82.026
ENSORLG00015016507	-	56	58.857	ENSORLG00015016302	HNRNPA0	92	45.597
ENSORLG00015016507	-	55	32.639	ENSORLG00015005048	tardbpl	65	30.909
ENSORLG00015016507	-	64	96.933	ENSORLG00015015204	-	72	96.933
ENSORLG00015016507	-	57	32.824	ENSORLG00015017343	tardbp	50	32.824
ENSORLG00015016507	-	59	38.636	ENSORLG00015014131	hnrnpabb	57	38.636
ENSORLG00015016507	-	64	35.366	ENSORLG00015004592	msi2a	59	36.000
ENSORLG00015016507	-	63	95.545	ENSORLG00015015182	-	88	95.545
ENSORLG00015016507	-	95	85.294	ENSORLG00015017144	-	97	79.811
ENSORLG00015016507	-	94	88.487	ENSORLG00015015185	-	97	88.487

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015016507	-	55	60.674	ENSG00000177733	HNRNPA0	95	45.938	Homo_sapiens
ENSORLG00015016507	-	55	51.955	ENSAPOG00000014678	-	95	42.056	Acanthochromis_polyacanthus
ENSORLG00015016507	-	66	69.626	ENSAPOG00000003387	HNRNPA0	69	71.717	Acanthochromis_polyacanthus
ENSORLG00015016507	-	57	51.913	ENSAPOG00000003641	hnrnpa3	95	40.597	Acanthochromis_polyacanthus
ENSORLG00015016507	-	57	60.000	ENSAPOG00000003364	HNRNPA0	94	48.765	Acanthochromis_polyacanthus
ENSORLG00015016507	-	55	51.955	ENSAPOG00000003688	hnrnpa3	95	40.597	Acanthochromis_polyacanthus
ENSORLG00015016507	-	54	50.370	ENSAMEG00000004293	-	91	38.095	Ailuropoda_melanoleuca
ENSORLG00015016507	-	55	60.335	ENSAMEG00000016316	HNRNPA0	84	48.123	Ailuropoda_melanoleuca
ENSORLG00015016507	-	57	73.514	ENSACIG00000021834	HNRNPA0	88	72.362	Amphilophus_citrinellus
ENSORLG00015016507	-	56	51.648	ENSAOCG00000004095	hnrnpa3	88	44.340	Amphiprion_ocellaris
ENSORLG00015016507	-	56	51.648	ENSAPEG00000022522	hnrnpa3	88	44.340	Amphiprion_percula
ENSORLG00015016507	-	56	61.017	ENSATEG00000003526	-	94	61.017	Anabas_testudineus
ENSORLG00015016507	-	56	51.648	ENSATEG00000015304	hnrnpa3	94	44.340	Anabas_testudineus
ENSORLG00015016507	-	56	53.297	ENSACAG00000012234	-	91	44.713	Anolis_carolinensis
ENSORLG00015016507	-	55	60.335	ENSANAG00000017086	HNRNPA0	93	45.938	Aotus_nancymaae
ENSORLG00015016507	-	55	51.412	ENSANAG00000037918	-	92	42.183	Aotus_nancymaae
ENSORLG00015016507	-	56	51.648	ENSACLG00000008532	hnrnpa3	93	45.714	Astatotilapia_calliptera
ENSORLG00015016507	-	94	52.459	ENSACLG00000008973	HNRNPA0	93	55.016	Astatotilapia_calliptera
ENSORLG00015016507	-	56	52.747	ENSAMXG00000007065	hnrnpa3	94	40.549	Astyanax_mexicanus
ENSORLG00015016507	-	55	60.335	ENSBTAG00000016929	HNRNPA0	91	46.708	Bos_taurus
ENSORLG00015016507	-	55	60.335	ENSCJAG00000006112	HNRNPA0	95	45.938	Callithrix_jacchus
ENSORLG00015016507	-	55	50.847	ENSCJAG00000013830	-	91	42.857	Callithrix_jacchus
ENSORLG00015016507	-	55	60.335	ENSCAFG00000001132	HNRNPA0	95	46.462	Canis_familiaris
ENSORLG00015016507	-	55	60.335	ENSCAFG00020008142	HNRNPA0	95	46.462	Canis_lupus_dingo
ENSORLG00015016507	-	55	60.335	ENSCHIG00000002602	HNRNPA0	95	46.584	Capra_hircus
ENSORLG00015016507	-	55	48.571	ENSCAPG00000003643	-	88	40.240	Cavia_aperea
ENSORLG00015016507	-	56	60.556	ENSCPOG00000026092	HNRNPA0	95	46.855	Cavia_porcellus
ENSORLG00015016507	-	56	44.199	ENSCATG00000038569	-	93	38.323	Cercocebus_atys
ENSORLG00015016507	-	55	60.335	ENSCLAG00000015132	HNRNPA0	94	47.231	Chinchilla_lanigera
ENSORLG00015016507	-	55	60.674	ENSCSAG00000000499	HNRNPA0	95	46.250	Chlorocebus_sabaeus
ENSORLG00015016507	-	55	60.335	ENSCPBG00000008738	HNRNPA0	95	45.538	Chrysemys_picta_bellii
ENSORLG00015016507	-	89	34.106	ENSCING00000013663	-	50	42.021	Ciona_intestinalis
ENSORLG00015016507	-	55	50.847	ENSCANG00000017881	-	96	42.433	Colobus_angolensis_palliatus
ENSORLG00015016507	-	55	60.674	ENSCANG00000038062	HNRNPA0	93	46.250	Colobus_angolensis_palliatus
ENSORLG00015016507	-	55	42.938	ENSCGRG00001010070	-	58	42.077	Cricetulus_griseus_chok1gshd
ENSORLG00015016507	-	56	60.556	ENSCGRG00001005548	Hnrnpa0	94	45.768	Cricetulus_griseus_chok1gshd
ENSORLG00015016507	-	55	42.938	ENSCGRG00000007592	-	57	42.077	Cricetulus_griseus_crigri
ENSORLG00015016507	-	55	48.588	ENSCGRG00000003686	-	62	48.588	Cricetulus_griseus_crigri
ENSORLG00015016507	-	56	50.000	ENSCVAG00000018995	hnrnpa3	91	43.849	Cyprinodon_variegatus
ENSORLG00015016507	-	56	52.198	ENSDARG00000059351	hnrnpa3	94	42.810	Danio_rerio
ENSORLG00015016507	-	55	60.335	ENSDNOG00000030903	HNRNPA0	93	45.260	Dasypus_novemcinctus
ENSORLG00015016507	-	55	51.977	ENSDNOG00000031964	-	85	40.895	Dasypus_novemcinctus
ENSORLG00015016507	-	55	43.503	ENSDORG00000023528	-	87	40.062	Dipodomys_ordii
ENSORLG00015016507	-	56	41.111	ENSETEG00000007747	-	96	34.936	Echinops_telfairi
ENSORLG00015016507	-	56	50.847	ENSEBUG00000016570	HNRNPA0	93	40.413	Eptatretus_burgeri
ENSORLG00015016507	-	56	49.721	ENSEBUG00000009297	HNRNPA0	95	39.571	Eptatretus_burgeri
ENSORLG00015016507	-	56	50.000	ENSELUG00000023080	hnrnpa3	91	41.009	Esox_lucius
ENSORLG00015016507	-	55	60.335	ENSFCAG00000040261	HNRNPA0	95	45.820	Felis_catus
ENSORLG00015016507	-	56	60.000	ENSFALG00000014395	HNRNPA0	94	49.180	Ficedula_albicollis
ENSORLG00015016507	-	55	40.678	ENSFDAG00000018739	-	85	37.346	Fukomys_damarensis
ENSORLG00015016507	-	55	45.198	ENSFDAG00000014067	-	53	44.505	Fukomys_damarensis
ENSORLG00015016507	-	56	60.556	ENSFDAG00000019780	HNRNPA0	74	61.582	Fukomys_damarensis
ENSORLG00015016507	-	55	58.659	ENSFHEG00000008390	HNRNPA0	86	45.566	Fundulus_heteroclitus
ENSORLG00015016507	-	58	66.667	ENSFHEG00000008384	HNRNPA0	93	66.667	Fundulus_heteroclitus
ENSORLG00015016507	-	56	60.000	ENSGALG00000006160	HNRNPA0	98	49.671	Gallus_gallus
ENSORLG00015016507	-	56	51.648	ENSGACG00000004477	hnrnpa3	94	43.519	Gasterosteus_aculeatus
ENSORLG00015016507	-	55	60.335	ENSGAGG00000005632	HNRNPA0	95	46.154	Gopherus_agassizii
ENSORLG00015016507	-	57	73.514	ENSHBUG00000023868	HNRNPA0	74	72.775	Haplochromis_burtoni
ENSORLG00015016507	-	56	51.648	ENSHBUG00000019734	hnrnpa3	93	44.654	Haplochromis_burtoni
ENSORLG00015016507	-	56	60.556	ENSHGLG00000018216	HNRNPA0	95	46.519	Heterocephalus_glaber_female
ENSORLG00015016507	-	55	48.588	ENSHGLG00000014577	-	64	47.802	Heterocephalus_glaber_female
ENSORLG00015016507	-	55	50.282	ENSHGLG00100001336	-	93	38.484	Heterocephalus_glaber_male
ENSORLG00015016507	-	55	53.107	ENSHGLG00100006677	-	87	41.566	Heterocephalus_glaber_male
ENSORLG00015016507	-	64	70.482	ENSHCOG00000007174	HNRNPA0	90	70.482	Hippocampus_comes
ENSORLG00015016507	-	56	53.846	ENSIPUG00000019815	RO32	94	42.901	Ictalurus_punctatus
ENSORLG00015016507	-	55	40.113	ENSSTOG00000019374	-	88	36.310	Ictidomys_tridecemlineatus
ENSORLG00015016507	-	56	60.556	ENSJJAG00000006954	Hnrnpa0	94	46.815	Jaculus_jaculus
ENSORLG00015016507	-	64	51.099	ENSKMAG00000015973	hnrnpa3	94	43.302	Kryptolebias_marmoratus
ENSORLG00015016507	-	56	50.549	ENSLBEG00000016767	hnrnpa3	93	42.236	Labrus_bergylta
ENSORLG00015016507	-	58	56.915	ENSLACG00000014480	HNRNPA0	66	55.500	Latimeria_chalumnae
ENSORLG00015016507	-	55	51.977	ENSLACG00000008189	hnrnpa3	90	40.294	Latimeria_chalumnae
ENSORLG00015016507	-	55	52.542	ENSLOCG00000006476	-	92	42.478	Lepisosteus_oculatus
ENSORLG00015016507	-	55	52.514	ENSLOCG00000006986	hnrnpa3	95	42.508	Lepisosteus_oculatus
ENSORLG00015016507	-	64	52.632	ENSLAFG00000027712	-	88	40.000	Loxodonta_africana
ENSORLG00015016507	-	55	60.674	ENSMFAG00000030522	HNRNPA0	93	46.250	Macaca_fascicularis
ENSORLG00015016507	-	56	43.169	ENSMMUG00000031232	-	93	39.210	Macaca_mulatta
ENSORLG00015016507	-	56	43.889	ENSMNEG00000038943	-	69	43.646	Macaca_nemestrina
ENSORLG00015016507	-	55	60.674	ENSMNEG00000015863	HNRNPA0	93	46.250	Macaca_nemestrina
ENSORLG00015016507	-	55	60.674	ENSMLEG00000026629	HNRNPA0	93	46.273	Mandrillus_leucophaeus
ENSORLG00015016507	-	56	44.199	ENSMLEG00000033415	-	92	40.123	Mandrillus_leucophaeus
ENSORLG00015016507	-	61	71.717	ENSMAMG00000017754	HNRNPA0	96	58.484	Mastacembelus_armatus
ENSORLG00015016507	-	94	52.459	ENSMZEG00005001055	HNRNPA0	93	55.016	Maylandia_zebra
ENSORLG00015016507	-	56	51.648	ENSMZEG00005004663	hnrnpa3	93	45.714	Maylandia_zebra
ENSORLG00015016507	-	56	60.335	ENSMAUG00000018485	Hnrnpa0	59	61.582	Mesocricetus_auratus
ENSORLG00015016507	-	55	49.153	ENSMODG00000024570	-	91	42.813	Monodelphis_domestica
ENSORLG00015016507	-	56	56.180	ENSMODG00000002463	-	96	56.180	Monodelphis_domestica
ENSORLG00015016507	-	56	60.335	ENSMODG00000014720	HNRNPA0	74	60.335	Monodelphis_domestica
ENSORLG00015016507	-	60	48.205	ENSMALG00000009691	hnrnpa3	96	49.673	Monopterus_albus
ENSORLG00015016507	-	55	60.335	ENSMUSG00000007836	Hnrnpa0	95	46.984	Mus_musculus
ENSORLG00015016507	-	55	60.335	MGP_SPRETEiJ_G0019473	Hnrnpa0	95	47.742	Mus_spretus
ENSORLG00015016507	-	55	60.335	ENSMPUG00000019790	HNRNPA0	95	45.820	Mustela_putorius_furo
ENSORLG00015016507	-	55	60.335	ENSMLUG00000012683	-	93	46.417	Myotis_lucifugus
ENSORLG00015016507	-	55	58.659	ENSMLUG00000028644	-	94	44.910	Myotis_lucifugus
ENSORLG00015016507	-	55	60.335	ENSNGAG00000008883	Hnrnpa0	95	47.604	Nannospalax_galili
ENSORLG00015016507	-	55	51.977	ENSNLEG00000027151	-	93	43.636	Nomascus_leucogenys
ENSORLG00015016507	-	55	60.674	ENSNLEG00000008518	HNRNPA0	93	45.846	Nomascus_leucogenys
ENSORLG00015016507	-	55	60.335	ENSMEUG00000013675	HNRNPA0	94	45.652	Notamacropus_eugenii
ENSORLG00015016507	-	56	60.556	ENSODEG00000019566	HNRNPA0	95	46.541	Octodon_degus
ENSORLG00015016507	-	55	52.542	ENSODEG00000016578	-	57	51.648	Octodon_degus
ENSORLG00015016507	-	55	51.955	ENSONIG00000008607	hnrnpa3	77	44.654	Oreochromis_niloticus
ENSORLG00015016507	-	56	96.133	ENSORLG00000027074	-	80	96.133	Oryzias_latipes
ENSORLG00015016507	-	67	65.596	ENSORLG00000025015	-	68	69.192	Oryzias_latipes
ENSORLG00015016507	-	67	65.596	ENSORLG00000025332	-	68	69.192	Oryzias_latipes
ENSORLG00015016507	-	59	48.454	ENSORLG00000017561	hnrnpa3	93	40.964	Oryzias_latipes
ENSORLG00015016507	-	94	90.789	ENSORLG00020008203	-	98	90.789	Oryzias_latipes_hni
ENSORLG00015016507	-	59	48.969	ENSORLG00020020788	hnrnpa3	93	41.265	Oryzias_latipes_hni
ENSORLG00015016507	-	96	90.968	ENSORLG00020007505	-	99	90.968	Oryzias_latipes_hni
ENSORLG00015016507	-	94	59.091	ENSORLG00020022487	-	95	56.634	Oryzias_latipes_hni
ENSORLG00015016507	-	94	95.395	ENSORLG00020007109	-	99	95.395	Oryzias_latipes_hni
ENSORLG00015016507	-	56	50.549	ENSOMEG00000004838	hnrnpa3	93	42.138	Oryzias_melastigma
ENSORLG00015016507	-	55	60.335	ENSOGAG00000025754	HNRNPA0	75	61.017	Otolemur_garnettii
ENSORLG00015016507	-	55	60.335	ENSOARG00000015434	HNRNPA0	93	46.945	Ovis_aries
ENSORLG00015016507	-	55	60.674	ENSPPAG00000005303	HNRNPA0	93	45.794	Pan_paniscus
ENSORLG00015016507	-	55	60.335	ENSPPRG00000014655	HNRNPA0	95	45.794	Panthera_pardus
ENSORLG00015016507	-	55	60.674	ENSPTRG00000017273	HNRNPA0	93	45.794	Pan_troglodytes
ENSORLG00015016507	-	55	60.674	ENSPANG00000012900	HNRNPA0	93	46.273	Papio_anubis
ENSORLG00015016507	-	55	64.972	ENSPKIG00000020281	-	83	53.746	Paramormyrops_kingsleyae
ENSORLG00015016507	-	64	52.198	ENSPKIG00000022916	hnrnpa3	67	52.198	Paramormyrops_kingsleyae
ENSORLG00015016507	-	55	64.804	ENSPKIG00000020270	HNRNPA0	93	52.632	Paramormyrops_kingsleyae
ENSORLG00015016507	-	56	50.549	ENSPMGG00000000747	hnrnpa3	94	41.720	Periophthalmus_magnuspinnatus
ENSORLG00015016507	-	69	53.812	ENSPEMG00000020274	Hnrnpa0	70	61.582	Peromyscus_maniculatus_bairdii
ENSORLG00015016507	-	55	51.705	ENSPMAG00000004449	-	77	51.111	Petromyzon_marinus
ENSORLG00015016507	-	56	50.549	ENSPFOG00000014049	hnrnpa3	94	42.722	Poecilia_formosa
ENSORLG00015016507	-	53	59.649	ENSPLAG00000015223	-	90	46.226	Poecilia_latipinna
ENSORLG00015016507	-	56	50.549	ENSPMEG00000006390	hnrnpa3	94	42.722	Poecilia_mexicana
ENSORLG00015016507	-	56	70.166	ENSPMEG00000017025	HNRNPA0	98	70.166	Poecilia_mexicana
ENSORLG00015016507	-	64	73.418	ENSPREG00000010619	HNRNPA0	75	73.418	Poecilia_reticulata
ENSORLG00015016507	-	56	50.549	ENSPREG00000005411	hnrnpa3	94	43.533	Poecilia_reticulata
ENSORLG00015016507	-	55	51.977	ENSPPYG00000001012	-	59	51.099	Pongo_abelii
ENSORLG00015016507	-	90	52.288	ENSPPYG00000012967	-	80	52.288	Pongo_abelii
ENSORLG00015016507	-	55	60.674	ENSPPYG00000015814	HNRNPA0	95	45.938	Pongo_abelii
ENSORLG00015016507	-	58	50.538	ENSPNYG00000008424	hnrnpa3	79	50.538	Pundamilia_nyererei
ENSORLG00015016507	-	55	63.483	ENSPNAG00000023333	HNRNPA0	93	52.703	Pygocentrus_nattereri
ENSORLG00015016507	-	55	60.335	ENSRNOG00000039876	LOC681410	96	47.742	Rattus_norvegicus
ENSORLG00015016507	-	55	60.674	ENSRBIG00000023673	HNRNPA0	93	46.519	Rhinopithecus_bieti
ENSORLG00015016507	-	55	60.674	ENSRROG00000002558	HNRNPA0	93	46.519	Rhinopithecus_roxellana
ENSORLG00015016507	-	56	52.747	ENSSFOG00015001814	hnrnpa3	88	42.813	Scleropages_formosus
ENSORLG00015016507	-	59	52.083	ENSSFOG00015016280	hnrnpa1	92	44.720	Scleropages_formosus
ENSORLG00015016507	-	55	64.607	ENSSFOG00015002650	HNRNPA0	78	63.021	Scleropages_formosus
ENSORLG00015016507	-	56	50.000	ENSSMAG00000015218	hnrnpa3	86	44.272	Scophthalmus_maximus
ENSORLG00015016507	-	56	51.099	ENSSDUG00000000381	hnrnpa3	94	44.025	Seriola_dumerili
ENSORLG00015016507	-	55	59.777	ENSSPUG00000016613	HNRNPA0	95	45.988	Sphenodon_punctatus
ENSORLG00015016507	-	56	60.795	ENSSPAG00000001272	-	81	47.785	Stegastes_partitus
ENSORLG00015016507	-	55	51.955	ENSSPAG00000008969	hnrnpa3	94	43.750	Stegastes_partitus
ENSORLG00015016507	-	57	40.000	ENSSSCG00000001098	-	88	37.725	Sus_scrofa
ENSORLG00015016507	-	64	43.750	ENSSSCG00000040926	-	58	43.750	Sus_scrofa
ENSORLG00015016507	-	64	43.750	ENSSSCG00000033635	-	58	43.750	Sus_scrofa
ENSORLG00015016507	-	57	56.216	ENSTGUG00000001186	HNRNPA0	99	46.885	Taeniopygia_guttata
ENSORLG00015016507	-	58	49.733	ENSTRUG00000017504	hnrnpa3	93	43.789	Takifugu_rubripes
ENSORLG00015016507	-	54	60.116	ENSTRUG00000021494	-	93	46.965	Takifugu_rubripes
ENSORLG00015016507	-	61	48.731	ENSTNIG00000016958	hnrnpa3	96	44.379	Tetraodon_nigroviridis
ENSORLG00015016507	-	55	60.335	ENSTTRG00000000499	HNRNPA0	95	46.417	Tursiops_truncatus
ENSORLG00015016507	-	55	60.335	ENSVVUG00000014736	HNRNPA0	95	45.538	Vulpes_vulpes
ENSORLG00015016507	-	54	59.429	ENSXETG00000003833	hnrnpa0	90	45.714	Xenopus_tropicalis
ENSORLG00015016507	-	64	53.297	ENSXETG00000001806	hnrnpa3	92	43.529	Xenopus_tropicalis
ENSORLG00015016507	-	57	69.189	ENSXMAG00000019804	HNRNPA0	98	69.189	Xiphophorus_maculatus
ENSORLG00015016507	-	55	58.659	ENSXMAG00000029150	HNRNPA0	92	46.154	Xiphophorus_maculatus
ENSORLG00015016507	-	56	50.549	ENSXMAG00000000439	hnrnpa3	94	43.218	Xiphophorus_maculatus